RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 GRIPAP1Q4V328 841 aa20.57■□□□□ 0.88
LIM2-201ENST00000221973 JDP2Q8WYK2 163 aa20.57■□□□□ 0.88
LIM2-201ENST00000221973 SUCLG2Q96I99 432 aa20.57■□□□□ 0.88
LIM2-201ENST00000221973 EAPPQ56P03 285 aaPredicted RBP20.56■□□□□ 0.88
LIM2-201ENST00000221973 EXOC6Q8TAG9 804 aa20.56■□□□□ 0.88
LIM2-201ENST00000221973 ATP6V0A2Q9Y487 856 aa20.56■□□□□ 0.88
LIM2-201ENST00000221973 NEFLP07196 543 aa20.55■□□□□ 0.88
LIM2-201ENST00000221973 HSPA1AP0DMV8 641 aaKnown RBP20.55■□□□□ 0.88
LIM2-201ENST00000221973 HSPA1BP0DMV9 641 aaKnown RBP20.55■□□□□ 0.88
LIM2-201ENST00000221973 CHMP4BQ9H444 224 aaKnown RBP20.55■□□□□ 0.88
LIM2-201ENST00000221973 C1orf115Q9H7X2 142 aa20.55■□□□□ 0.88
LIM2-201ENST00000221973 MKRN1Q9UHC7 482 aaKnown RBP20.55■□□□□ 0.88
LIM2-201ENST00000221973 LRRFIP2Q9Y608 721 aaKnown RBP20.55■□□□□ 0.88
LIM2-201ENST00000221973 PDE8AO60658 829 aa20.54■□□□□ 0.88
LIM2-201ENST00000221973 GNAI2P04899 355 aa20.54■□□□□ 0.88
LIM2-201ENST00000221973 HSP90B1P14625 803 aaKnown RBP20.54■□□□□ 0.88
LIM2-201ENST00000221973 SCNN1DP51172 638 aa20.54■□□□□ 0.88
LIM2-201ENST00000221973 LARGE2Q8N3Y3 721 aa20.54■□□□□ 0.88
LIM2-201ENST00000221973 KAZALD1Q96I82 304 aa20.54■□□□□ 0.88
LIM2-201ENST00000221973 ZBTB40Q9NUA8 1239 aa20.54■□□□□ 0.88
LIM2-201ENST00000221973 EIF6P56537 245 aaKnown RBP20.53■□□□□ 0.88
LIM2-201ENST00000221973 EPHA10Q5JZY3 1008 aa20.53■□□□□ 0.88
LIM2-201ENST00000221973 RTFDC1Q9BY42 306 aaPredicted RBP20.53■□□□□ 0.88
LIM2-201ENST00000221973 HDAC5Q9UQL6 1122 aa20.53■□□□□ 0.88
LIM2-201ENST00000221973 CNTNAP1P78357 1384 aa20.53■□□□□ 0.88
LIM2-201ENST00000221973 TAF1P21675 1872 aa20.52■□□□□ 0.88
LIM2-201ENST00000221973 FOXO4P98177 505 aa20.52■□□□□ 0.88
LIM2-201ENST00000221973 AOC3Q16853 763 aa20.52■□□□□ 0.88
LIM2-201ENST00000221973 MAP1SQ66K74 1059 aaPredicted RBP20.52■□□□□ 0.88
LIM2-201ENST00000221973 PNMA8AQ86V59 439 aaPredicted RBP20.52■□□□□ 0.88
LIM2-201ENST00000221973 PLA2G12BQ9BX93 195 aa20.52■□□□□ 0.88
LIM2-201ENST00000221973 BICC1Q9H694 974 aaKnown RBP20.52■□□□□ 0.88
LIM2-201ENST00000221973 GJA3Q9Y6H8 435 aa20.52■□□□□ 0.88
LIM2-201ENST00000221973 DDX60Q8IY21 1712 aaKnown RBP20.51■□□□□ 0.87
LIM2-201ENST00000221973 EPS15P42566 896 aa20.51■□□□□ 0.87
LIM2-201ENST00000221973 CTSWP56202 376 aa20.51■□□□□ 0.87
LIM2-201ENST00000221973 CNTROBQ8N137 903 aa20.51■□□□□ 0.87
LIM2-201ENST00000221973 CCDC85AQ96PX6 553 aaPredicted RBP20.51■□□□□ 0.87
LIM2-201ENST00000221973 CLEC11AQ9Y240 323 aa20.51■□□□□ 0.87
LIM2-201ENST00000221973 TMEM88BA6NKF7 163 aa20.5■□□□□ 0.87
LIM2-201ENST00000221973 PPIP5K2O43314 1243 aa20.5■□□□□ 0.87
LIM2-201ENST00000221973 BBOX1O75936 387 aa20.5■□□□□ 0.87
LIM2-201ENST00000221973 LMBR1LQ6UX01 489 aa20.5■□□□□ 0.87
LIM2-201ENST00000221973 SP8Q8IXZ3 490 aa20.5■□□□□ 0.87
LIM2-201ENST00000221973 VPS33BQ9H267 617 aa20.5■□□□□ 0.87
LIM2-201ENST00000221973 COL4A1P02462 1669 aa20.5■□□□□ 0.87
LIM2-201ENST00000221973 NIM1KQ8IY84 436 aa20.49■□□□□ 0.87
LIM2-201ENST00000221973 ANKRD44Q8N8A2 993 aa20.49■□□□□ 0.87
LIM2-201ENST00000221973 TTLL11Q8NHH1 800 aa20.49■□□□□ 0.87
LIM2-201ENST00000221973 CHMP3Q9Y3E7 222 aa20.49■□□□□ 0.87
LIM2-201ENST00000221973 DUOX1Q9NRD9 1551 aa20.49■□□□□ 0.87
LIM2-201ENST00000221973 GRAPQ13588 217 aa20.48■□□□□ 0.87
LIM2-201ENST00000221973 SF3B3Q15393 1217 aaKnown RBP20.48■□□□□ 0.87
LIM2-201ENST00000221973 GRAPLQ8TC17 118 aaPredicted RBP20.48■□□□□ 0.87
LIM2-201ENST00000221973 LRRC37AA6NMS7 1700 aa20.47■□□□□ 0.87
LIM2-201ENST00000221973 CSF1RP07333 972 aa20.47■□□□□ 0.87
LIM2-201ENST00000221973 VEGFBP49765 207 aa20.47■□□□□ 0.87
LIM2-201ENST00000221973 CXCL9Q07325 125 aa20.47■□□□□ 0.87
LIM2-201ENST00000221973 RABL6Q3YEC7 729 aaPredicted RBP20.47■□□□□ 0.87
LIM2-201ENST00000221973 CCDC152Q4G0S7 254 aa20.47■□□□□ 0.87
LIM2-201ENST00000221973 DDX46Q7L014 1031 aaKnown RBP20.47■□□□□ 0.87
LIM2-201ENST00000221973 GREM2Q9H772 168 aa20.47■□□□□ 0.87
LIM2-201ENST00000221973 FMR1Q06787 632 aaKnown RBP eCLIP20.46■□□□□ 0.87
LIM2-201ENST00000221973 KIAA2012Q0VF49 1180 aa20.46■□□□□ 0.87
LIM2-201ENST00000221973 FAM161AQ3B820 660 aa20.46■□□□□ 0.87
LIM2-201ENST00000221973 DPP8Q6V1X1 898 aaPredicted RBP20.46■□□□□ 0.87
LIM2-201ENST00000221973 MPNDQ8N594 471 aa20.46■□□□□ 0.87
LIM2-201ENST00000221973 ZNRF3Q9ULT6 936 aa20.46■□□□□ 0.87
LIM2-201ENST00000221973 LMOD1P29536 600 aaPredicted RBP20.45■□□□□ 0.86
LIM2-201ENST00000221973 CEP85Q6P2H3 762 aa20.45■□□□□ 0.86
LIM2-201ENST00000221973 SUPT20HQ8NEM7 779 aa20.45■□□□□ 0.86
LIM2-201ENST00000221973 RASSF10A6NK89 507 aa20.44■□□□□ 0.86
LIM2-201ENST00000221973 AAMPQ13685 434 aa20.44■□□□□ 0.86
LIM2-201ENST00000221973 TNS4Q8IZW8 715 aa20.44■□□□□ 0.86
LIM2-201ENST00000221973 TMX4Q9H1E5 349 aaPredicted RBP20.44■□□□□ 0.86
LIM2-201ENST00000221973 SEC31BQ9NQW1 1179 aa20.44■□□□□ 0.86
LIM2-201ENST00000221973 GPRC5DQ9NZD1 345 aa20.44■□□□□ 0.86
LIM2-201ENST00000221973 PNMA6EA0A0J9YXQ4 647 aa20.43■□□□□ 0.86
LIM2-201ENST00000221973 SRGAP3O43295 1099 aa20.43■□□□□ 0.86
LIM2-201ENST00000221973 ITGA6P23229 1130 aa20.43■□□□□ 0.86
LIM2-201ENST00000221973 ATP8B2P98198 1209 aa20.43■□□□□ 0.86
LIM2-201ENST00000221973 CCDC57Q2TAC2 916 aa20.43■□□□□ 0.86
LIM2-201ENST00000221973 USP50Q70EL3 339 aaPredicted RBP20.43■□□□□ 0.86
LIM2-201ENST00000221973 CELF1Q92879 486 aaKnown RBP20.43■□□□□ 0.86
LIM2-201ENST00000221973 PCDHB15Q9Y5E8 787 aa20.43■□□□□ 0.86
LIM2-201ENST00000221973 YDJCA8MPS7 323 aa20.42■□□□□ 0.86
LIM2-201ENST00000221973 FOXN1O15353 648 aa20.42■□□□□ 0.86
LIM2-201ENST00000221973 IFIT5Q13325 482 aaKnown RBP20.42■□□□□ 0.86
LIM2-201ENST00000221973 MTX1Q13505 466 aa20.42■□□□□ 0.86
LIM2-201ENST00000221973 ANKRD18BA2A2Z9 1011 aa20.41■□□□□ 0.86
LIM2-201ENST00000221973 GMPSP49915 693 aaPredicted RBP20.41■□□□□ 0.86
LIM2-201ENST00000221973 TMC4Q7Z404 712 aa20.41■□□□□ 0.86
LIM2-201ENST00000221973 RPAP2Q8IXW5 612 aaPredicted RBP20.41■□□□□ 0.86
LIM2-201ENST00000221973 RTL9Q8NET4 1388 aa20.41■□□□□ 0.86
LIM2-201ENST00000221973 TRAF5O00463 557 aa20.4■□□□□ 0.86
LIM2-201ENST00000221973 RAD17O75943 681 aa20.4■□□□□ 0.86
LIM2-201ENST00000221973 DEFB115Q30KQ5 88 aa20.4■□□□□ 0.86
LIM2-201ENST00000221973 TAF7LQ5H9L4 462 aa20.4■□□□□ 0.86
LIM2-201ENST00000221973 CST9Q5W186 159 aa20.4■□□□□ 0.86
LIM2-201ENST00000221973 SIRT2Q8IXJ6 389 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms