RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.12□□□□□ -0.31
NEFM-201ENST00000221166 V9GYY5 206 aaPredicted RBP13.12□□□□□ -0.31
NEFM-201ENST00000221166 PTPDC1A2A3K4 754 aa13.12□□□□□ -0.31
NEFM-201ENST00000221166 BIN1O00499 593 aa13.12□□□□□ -0.31
NEFM-201ENST00000221166 SMC2O95347 1197 aa13.12□□□□□ -0.31
NEFM-201ENST00000221166 CYP21A2P08686 494 aa13.12□□□□□ -0.31
NEFM-201ENST00000221166 STK38Q15208 465 aa13.12□□□□□ -0.31
NEFM-201ENST00000221166 ISM2Q6H9L7 571 aa13.11□□□□□ -0.31
NEFM-201ENST00000221166 PROSER2Q86WR7 435 aaPredicted RBP13.11□□□□□ -0.31
NEFM-201ENST00000221166 CABLES1Q8TDN4 633 aa13.11□□□□□ -0.31
NEFM-201ENST00000221166 PXDNLA1KZ92 1463 aa13.11□□□□□ -0.31
NEFM-201ENST00000221166 AKAP12Q02952 1782 aa13.11□□□□□ -0.31
NEFM-201ENST00000221166 SCRN1Q12765 414 aa13.11□□□□□ -0.31
NEFM-201ENST00000221166 ZSCAN25Q6NSZ9 544 aa13.11□□□□□ -0.31
NEFM-201ENST00000221166 ZSCAN16Q9H4T2 348 aaPredicted RBP13.11□□□□□ -0.31
NEFM-201ENST00000221166 ZBTB3Q9H5J0 574 aa13.11□□□□□ -0.31
NEFM-201ENST00000221166 SPTLC3Q9NUV7 552 aa13.11□□□□□ -0.31
NEFM-201ENST00000221166 IFIT1P09914 478 aaKnown RBP13.1□□□□□ -0.31
NEFM-201ENST00000221166 HSP90AB3PQ58FF7 597 aa13.1□□□□□ -0.31
NEFM-201ENST00000221166 ARHGEF25Q86VW2 580 aa13.1□□□□□ -0.31
NEFM-201ENST00000221166 ZNF710Q8N1W2 664 aa13.1□□□□□ -0.31
NEFM-201ENST00000221166 DIP2BQ9P265 1576 aa13.1□□□□□ -0.31
NEFM-201ENST00000221166 SNRPA1P09661 255 aaKnown RBP13.1□□□□□ -0.31
NEFM-201ENST00000221166 ATP5JP18859 108 aa13.1□□□□□ -0.31
NEFM-201ENST00000221166 ARID5BQ14865 1188 aa13.1□□□□□ -0.31
NEFM-201ENST00000221166 ZNF594Q96JF6 807 aaPredicted RBP13.1□□□□□ -0.31
NEFM-201ENST00000221166 A0A0G2JS52 829 aa13.1□□□□□ -0.31
NEFM-201ENST00000221166 APPP05067 770 aa13.1□□□□□ -0.31
NEFM-201ENST00000221166 SYNE3Q6ZMZ3 975 aa13.1□□□□□ -0.31
NEFM-201ENST00000221166 DHX32Q7L7V1 743 aaKnown RBP13.1□□□□□ -0.31
NEFM-201ENST00000221166 CACTINQ8WUQ7 758 aaKnown RBP13.1□□□□□ -0.31
NEFM-201ENST00000221166 ELP1O95163 1332 aa13.09□□□□□ -0.31
NEFM-201ENST00000221166 SKILP12757 684 aa13.09□□□□□ -0.31
NEFM-201ENST00000221166 STX1AQ16623 288 aa13.09□□□□□ -0.31
NEFM-201ENST00000221166 CEP57L1Q8IYX8 460 aa13.09□□□□□ -0.31
NEFM-201ENST00000221166 AOPEPQ8N6M6 819 aa13.09□□□□□ -0.31
NEFM-201ENST00000221166 DDX17Q92841 729 aaKnown RBP13.09□□□□□ -0.31
NEFM-201ENST00000221166 PTPN12Q05209 780 aaKnown RBP13.09□□□□□ -0.31
NEFM-201ENST00000221166 C11orf57Q6ZUT1 292 aaPredicted RBP13.09□□□□□ -0.31
NEFM-201ENST00000221166 USP28Q96RU2 1077 aa13.09□□□□□ -0.31
NEFM-201ENST00000221166 SETD1AO15047 1707 aaKnown RBP13.09□□□□□ -0.31
NEFM-201ENST00000221166 A0A1B0GVL5 298 aa13.09□□□□□ -0.31
NEFM-201ENST00000221166 DIP2AQ14689 1571 aa13.09□□□□□ -0.31
NEFM-201ENST00000221166 NAA30Q147X3 362 aaPredicted RBP13.09□□□□□ -0.31
NEFM-201ENST00000221166 PTPN14Q15678 1187 aa13.09□□□□□ -0.31
NEFM-201ENST00000221166 TTLL5Q6EMB2 1281 aa13.09□□□□□ -0.31
NEFM-201ENST00000221166 SLC52A2Q9HAB3 445 aa13.09□□□□□ -0.31
NEFM-201ENST00000221166 PAG1Q9NWQ8 432 aa13.09□□□□□ -0.31
NEFM-201ENST00000221166 RESTQ13127 1097 aa13.08□□□□□ -0.32
NEFM-201ENST00000221166 CEP135Q66GS9 1140 aa13.08□□□□□ -0.32
NEFM-201ENST00000221166 KCNB2Q92953 911 aa13.08□□□□□ -0.32
NEFM-201ENST00000221166 ANO10Q9NW15 660 aa13.08□□□□□ -0.32
NEFM-201ENST00000221166 RALYLQ86SE5 291 aaKnown RBP13.08□□□□□ -0.32
NEFM-201ENST00000221166 IFNL2Q8IZJ0 200 aa13.08□□□□□ -0.32
NEFM-201ENST00000221166 STK11IPQ8N1F8 1099 aa13.08□□□□□ -0.32
NEFM-201ENST00000221166 SYTL4Q96C24 671 aaPredicted RBP13.08□□□□□ -0.32
NEFM-201ENST00000221166 NAT10Q9H0A0 1025 aaKnown RBP13.08□□□□□ -0.32
NEFM-201ENST00000221166 NRDCO43847 1150 aa13.08□□□□□ -0.32
NEFM-201ENST00000221166 ATP2B3Q16720 1220 aa13.08□□□□□ -0.32
NEFM-201ENST00000221166 ZNF771Q7L3S4 317 aaPredicted RBP13.08□□□□□ -0.32
NEFM-201ENST00000221166 HMGB1P09429 215 aaKnown RBP13.07□□□□□ -0.32
NEFM-201ENST00000221166 CCDC144BQ3MJ40 725 aa13.07□□□□□ -0.32
NEFM-201ENST00000221166 CCDC144CPQ8IYA2 1237 aa13.07□□□□□ -0.32
NEFM-201ENST00000221166 SMAP1Q8IYB5 467 aaPredicted RBP13.07□□□□□ -0.32
NEFM-201ENST00000221166 COPRSQ9NQ92 184 aa13.07□□□□□ -0.32
NEFM-201ENST00000221166 CEP126Q9P2H0 1117 aa13.07□□□□□ -0.32
NEFM-201ENST00000221166 TPM4P67936 248 aa13.07□□□□□ -0.32
NEFM-201ENST00000221166 PDIA6Q15084 440 aa13.07□□□□□ -0.32
NEFM-201ENST00000221166 TTC39AQ5SRH9 613 aa13.07□□□□□ -0.32
NEFM-201ENST00000221166 HOMER1Q86YM7 354 aa13.07□□□□□ -0.32
NEFM-201ENST00000221166 KBTBD3Q8NAB2 608 aa13.07□□□□□ -0.32
NEFM-201ENST00000221166 A0A0G2JLW4 131 aa13.06□□□□□ -0.32
NEFM-201ENST00000221166 CCDC69A6NI79 296 aa13.06□□□□□ -0.32
NEFM-201ENST00000221166 C8orf76Q96K31 380 aa13.06□□□□□ -0.32
NEFM-201ENST00000221166 GPHNQ9NQX3 736 aaPredicted RBP13.06□□□□□ -0.32
NEFM-201ENST00000221166 TDRD7Q8NHU6 1098 aaKnown RBP13.06□□□□□ -0.32
NEFM-201ENST00000221166 CTAGE5O15320 804 aa13.06□□□□□ -0.32
NEFM-201ENST00000221166 STOX1Q6ZVD7 989 aa13.05□□□□□ -0.32
NEFM-201ENST00000221166 NSUN7Q8NE18 718 aaKnown RBP13.05□□□□□ -0.32
NEFM-201ENST00000221166 HAUS7Q99871 368 aa13.05□□□□□ -0.32
NEFM-201ENST00000221166 CCDC158Q5M9N0 1113 aa13.05□□□□□ -0.32
NEFM-201ENST00000221166 TOMM22Q9NS69 142 aa13.05□□□□□ -0.32
NEFM-201ENST00000221166 GOLGA8BA8MQT2 603 aa13.05□□□□□ -0.32
NEFM-201ENST00000221166 SMTNL1A8MU46 457 aa13.05□□□□□ -0.32
NEFM-201ENST00000221166 E7EWF7 191 aa13.05□□□□□ -0.32
NEFM-201ENST00000221166 TMC6Q7Z403 805 aa13.05□□□□□ -0.32
NEFM-201ENST00000221166 ORC3Q9UBD5 711 aaPredicted RBP13.05□□□□□ -0.32
NEFM-201ENST00000221166 KLF18A0A0U1RQI7 1052 aa13.04□□□□□ -0.32
NEFM-201ENST00000221166 LRRC24Q50LG9 513 aa13.04□□□□□ -0.32
NEFM-201ENST00000221166 GOLPH3LQ9H4A5 285 aa13.04□□□□□ -0.32
NEFM-201ENST00000221166 ANKARQ7Z5J8 1434 aa13.04□□□□□ -0.32
NEFM-201ENST00000221166 PFKFB2O60825 505 aa13.04□□□□□ -0.32
NEFM-201ENST00000221166 MARCKSP29966 332 aaPredicted RBP13.04□□□□□ -0.32
NEFM-201ENST00000221166 CCDC57Q2TAC2 916 aa13.04□□□□□ -0.32
NEFM-201ENST00000221166 MRPS27Q92552 414 aaKnown RBP13.04□□□□□ -0.32
NEFM-201ENST00000221166 PHKG2P15735 406 aa13.04□□□□□ -0.32
NEFM-201ENST00000221166 TRDNQ13061 729 aa13.04□□□□□ -0.32
NEFM-201ENST00000221166 CWC25Q9NXE8 425 aaPredicted RBP13.04□□□□□ -0.32
NEFM-201ENST00000221166 MED23Q9ULK4 1368 aa13.04□□□□□ -0.32
NEFM-201ENST00000221166 A1BGP04217 495 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms