RNA–Protein interactions for RNA: ENST00000219476.7

TSC2-201, Transcript of TSC complex subunit 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene TSC2, Length 6,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-201ENST00000219476 TMOD4Q9NZQ9 345 aa18.78■□□□□ 0.6
TSC2-201ENST00000219476 GJA3Q9Y6H8 435 aa18.78■□□□□ 0.6
TSC2-201ENST00000219476 AGTPBP1Q9UPW5 1226 aa18.77■□□□□ 0.6
TSC2-201ENST00000219476 SMARCA5O60264 1052 aaPredicted RBP18.77■□□□□ 0.6
TSC2-201ENST00000219476 CNGA1P29973 690 aa18.77■□□□□ 0.6
TSC2-201ENST00000219476 ERCC6LQ2NKX8 1250 aa18.77■□□□□ 0.6
TSC2-201ENST00000219476 CCDC129Q6ZRS4 1044 aa18.77■□□□□ 0.6
TSC2-201ENST00000219476 CDCA7LQ96GN5 454 aa18.77■□□□□ 0.6
TSC2-201ENST00000219476 FCHSD2O94868 740 aa18.77■□□□□ 0.6
TSC2-201ENST00000219476 GNAQP50148 359 aa18.77■□□□□ 0.6
TSC2-201ENST00000219476 ISM2Q6H9L7 571 aa18.77■□□□□ 0.6
TSC2-201ENST00000219476 HAND2P61296 217 aa18.77■□□□□ 0.59
TSC2-201ENST00000219476 JAKMIP2Q96AA8 810 aa18.77■□□□□ 0.59
TSC2-201ENST00000219476 HMGB1P1B2RPK0 211 aaPredicted RBP18.76■□□□□ 0.59
TSC2-201ENST00000219476 GTF3C6Q969F1 213 aa18.76■□□□□ 0.59
TSC2-201ENST00000219476 FAM114A2Q9NRY5 505 aa18.76■□□□□ 0.59
TSC2-201ENST00000219476 ATAD2Q6PL18 1390 aa18.76■□□□□ 0.59
TSC2-201ENST00000219476 CYP7A1P22680 504 aa18.76■□□□□ 0.59
TSC2-201ENST00000219476 ASIC1P78348 528 aa18.76■□□□□ 0.59
TSC2-201ENST00000219476 PPP1R7Q15435 360 aa18.76■□□□□ 0.59
TSC2-201ENST00000219476 RAB11FIP4Q86YS3 637 aa18.76■□□□□ 0.59
TSC2-201ENST00000219476 CTAGE1Q96RT6 745 aa18.76■□□□□ 0.59
TSC2-201ENST00000219476 DDX19AQ9NUU7 478 aaKnown RBP18.76■□□□□ 0.59
TSC2-201ENST00000219476 ORC3Q9UBD5 711 aaPredicted RBP18.76■□□□□ 0.59
TSC2-201ENST00000219476 STK10O94804 968 aaKnown RBP18.76■□□□□ 0.59
TSC2-201ENST00000219476 BMP15O95972 392 aa18.76■□□□□ 0.59
TSC2-201ENST00000219476 SNRKQ9NRH2 765 aa18.76■□□□□ 0.59
TSC2-201ENST00000219476 IVNS1ABPQ9Y6Y0 642 aa18.76■□□□□ 0.59
TSC2-201ENST00000219476 OPA1O60313 960 aa18.76■□□□□ 0.59
TSC2-201ENST00000219476 CIB2O75838 187 aa18.76■□□□□ 0.59
TSC2-201ENST00000219476 GTF2F1P35269 517 aaKnown RBP eCLIP18.76■□□□□ 0.591e-8■■■■■ 44.7
TSC2-201ENST00000219476 DNAAF4Q8WXU2 420 aa18.76■□□□□ 0.59
TSC2-201ENST00000219476 NUDT16Q96DE0 195 aaKnown RBP18.76■□□□□ 0.59
TSC2-201ENST00000219476 SEC62Q99442 399 aaKnown RBP18.76■□□□□ 0.59
TSC2-201ENST00000219476 TRIM6Q9C030 488 aaPredicted RBP18.76■□□□□ 0.59
TSC2-201ENST00000219476 CADPSQ9ULU8 1353 aa18.76■□□□□ 0.59
TSC2-201ENST00000219476 M0QZ92 97 aa18.75■□□□□ 0.59
TSC2-201ENST00000219476 SLC52A1Q9NWF4 448 aa18.75■□□□□ 0.59
TSC2-201ENST00000219476 CALCOCO1Q9P1Z2 691 aa18.75■□□□□ 0.59
TSC2-201ENST00000219476 ERCC5P28715 1186 aaPredicted RBP18.75■□□□□ 0.59
TSC2-201ENST00000219476 PICK1Q9NRD5 415 aa18.75■□□□□ 0.59
TSC2-201ENST00000219476 ARID5AQ03989 594 aa18.75■□□□□ 0.59
TSC2-201ENST00000219476 SNW1Q13573 536 aaKnown RBP18.75■□□□□ 0.59
TSC2-201ENST00000219476 HS2ST1Q7LGA3 356 aa18.75■□□□□ 0.59
TSC2-201ENST00000219476 AFMP43652 599 aa18.75■□□□□ 0.59
TSC2-201ENST00000219476 EVI5LQ96CN4 794 aa18.75■□□□□ 0.59
TSC2-201ENST00000219476 STX10O60499 249 aa18.75■□□□□ 0.59
TSC2-201ENST00000219476 HARSP12081 509 aaKnown RBP18.75■□□□□ 0.59
TSC2-201ENST00000219476 SARNPP82979 210 aaKnown RBP18.75■□□□□ 0.59
TSC2-201ENST00000219476 AFAP1Q8N556 730 aa18.75■□□□□ 0.59
TSC2-201ENST00000219476 WDR44Q5JSH3 913 aa18.74■□□□□ 0.59
TSC2-201ENST00000219476 CCDC125Q86Z20 511 aa18.74■□□□□ 0.59
TSC2-201ENST00000219476 CEP120Q8N960 986 aa18.74■□□□□ 0.59
TSC2-201ENST00000219476 RRP36Q96EU6 259 aaKnown RBP18.74■□□□□ 0.59
TSC2-201ENST00000219476 SLC4A4Q9Y6R1 1079 aa18.74■□□□□ 0.59
TSC2-201ENST00000219476 MAP7Q14244 749 aa18.74■□□□□ 0.59
TSC2-201ENST00000219476 UAP1Q16222 522 aaPredicted RBP18.74■□□□□ 0.59
TSC2-201ENST00000219476 KRT5P13647 590 aa18.74■□□□□ 0.59
TSC2-201ENST00000219476 SEPT10Q9P0V9 454 aa18.74■□□□□ 0.59
TSC2-201ENST00000219476 STIM2Q9P246 746 aa18.74■□□□□ 0.59
TSC2-201ENST00000219476 ANKRD50Q9ULJ7 1429 aa18.73■□□□□ 0.59
TSC2-201ENST00000219476 CLUL1Q15846 466 aa18.73■□□□□ 0.59
TSC2-201ENST00000219476 TNPO1Q92973 898 aaKnown RBP18.73■□□□□ 0.59
TSC2-201ENST00000219476 SMIM23A6NLE4 172 aa18.73■□□□□ 0.59
TSC2-201ENST00000219476 TACC1O75410 805 aa18.73■□□□□ 0.59
TSC2-201ENST00000219476 PPP2R5CQ13362 524 aa18.73■□□□□ 0.59
TSC2-201ENST00000219476 ZSWIM4Q9H7M6 989 aa18.73■□□□□ 0.59
TSC2-201ENST00000219476 KCNK9Q9NPC2 374 aa18.73■□□□□ 0.59
TSC2-201ENST00000219476 HSPA1LP34931 641 aa18.73■□□□□ 0.59
TSC2-201ENST00000219476 CCT6AP40227 531 aaKnown RBP18.73■□□□□ 0.59
TSC2-201ENST00000219476 ESR2Q92731 530 aa18.73■□□□□ 0.59
TSC2-201ENST00000219476 FNBP1Q96RU3 617 aa18.73■□□□□ 0.59
TSC2-201ENST00000219476 TFCP2L1Q9NZI6 479 aa18.73■□□□□ 0.59
TSC2-201ENST00000219476 LIMCH1Q9UPQ0 1083 aa18.73■□□□□ 0.59
TSC2-201ENST00000219476 GNG11P61952 73 aa18.72■□□□□ 0.59
TSC2-201ENST00000219476 ARID4AP29374 1257 aaPredicted RBP18.72■□□□□ 0.59
TSC2-201ENST00000219476 ATP6V1AP38606 617 aa18.72■□□□□ 0.59
TSC2-201ENST00000219476 EYA3Q99504 573 aa18.72■□□□□ 0.59
TSC2-201ENST00000219476 BIRC3Q13489 604 aa18.72■□□□□ 0.59
TSC2-201ENST00000219476 NLRP3Q96P20 1036 aa18.72■□□□□ 0.59
TSC2-201ENST00000219476 SH2D4AQ9H788 454 aa18.72■□□□□ 0.59
TSC2-201ENST00000219476 PSMA7O14818 248 aa18.72■□□□□ 0.59
TSC2-201ENST00000219476 SETDB1Q15047 1291 aa18.72■□□□□ 0.59
TSC2-201ENST00000219476 KRT79Q5XKE5 535 aa18.72■□□□□ 0.59
TSC2-201ENST00000219476 CCDC25Q86WR0 208 aa18.71■□□□□ 0.59
TSC2-201ENST00000219476 ATRIPQ8WXE1 791 aa18.71■□□□□ 0.59
TSC2-201ENST00000219476 DBF4Q9UBU7 674 aaPredicted RBP18.71■□□□□ 0.59
TSC2-201ENST00000219476 CASQ2O14958 399 aaPredicted RBP18.71■□□□□ 0.59
TSC2-201ENST00000219476 NYXQ9GZU5 481 aa18.71■□□□□ 0.59
TSC2-201ENST00000219476 NAA16Q6N069 864 aaPredicted RBP18.71■□□□□ 0.59
TSC2-201ENST00000219476 TRERF1Q96PN7 1200 aa18.71■□□□□ 0.59
TSC2-201ENST00000219476 RNF216Q9NWF9 866 aaPredicted RBP18.71■□□□□ 0.59
TSC2-201ENST00000219476 SRGAP1Q7Z6B7 1085 aa18.71■□□□□ 0.59
TSC2-201ENST00000219476 CNNM2Q9H8M5 875 aa18.71■□□□□ 0.59
TSC2-201ENST00000219476 MTRF1LQ9UGC7 380 aaKnown RBP18.71■□□□□ 0.59
TSC2-201ENST00000219476 SWAP70Q9UH65 585 aa18.71■□□□□ 0.59
TSC2-201ENST00000219476 SEPT14Q6ZU15 432 aa18.7■□□□□ 0.58
TSC2-201ENST00000219476 NOP9Q86U38 636 aaKnown RBP18.7■□□□□ 0.58
TSC2-201ENST00000219476 WDR66Q8TBY9 1149 aa18.7■□□□□ 0.58
TSC2-201ENST00000219476 C16orf45Q96MC5 204 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms