RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 XBP1P17861 261 aa14.44□□□□□ -0.1
TM9SF4-201ENST00000217315 CCAR2Q8N163 923 aaKnown RBP14.44□□□□□ -0.1
TM9SF4-201ENST00000217315 KBTBD3Q8NAB2 608 aa14.44□□□□□ -0.1
TM9SF4-201ENST00000217315 BIN1O00499 593 aa14.44□□□□□ -0.1
TM9SF4-201ENST00000217315 RNF113AO15541 343 aaKnown RBP14.44□□□□□ -0.1
TM9SF4-201ENST00000217315 ATP5JP18859 108 aa14.44□□□□□ -0.1
TM9SF4-201ENST00000217315 SLC9C2Q5TAH2 1124 aa14.44□□□□□ -0.1
TM9SF4-201ENST00000217315 NCOA7Q8NI08 942 aa14.44□□□□□ -0.1
TM9SF4-201ENST00000217315 UBAC1Q9BSL1 405 aa14.44□□□□□ -0.1
TM9SF4-201ENST00000217315 ZSWIM6Q9HCJ5 1215 aa14.44□□□□□ -0.1
TM9SF4-201ENST00000217315 PCDH11XQ9BZA7 1347 aa14.44□□□□□ -0.1
TM9SF4-201ENST00000217315 PCDH11YQ9BZA8 1340 aa14.44□□□□□ -0.1
TM9SF4-201ENST00000217315 MAP3K12Q12852 859 aa14.44□□□□□ -0.1
TM9SF4-201ENST00000217315 PDILTQ8N807 584 aa14.44□□□□□ -0.1
TM9SF4-201ENST00000217315 FAM200AQ8TCP9 573 aa14.44□□□□□ -0.1
TM9SF4-201ENST00000217315 GNL3LQ9NVN8 582 aaKnown RBP14.44□□□□□ -0.1
TM9SF4-201ENST00000217315 TECPR2O15040 1411 aa14.43□□□□□ -0.1
TM9SF4-201ENST00000217315 PTPDC1A2A3K4 754 aa14.43□□□□□ -0.1
TM9SF4-201ENST00000217315 PTPRUQ92729 1446 aa14.43□□□□□ -0.1
TM9SF4-201ENST00000217315 NCOA5Q9HCD5 579 aaKnown RBP14.43□□□□□ -0.1
TM9SF4-201ENST00000217315 DBNLQ9UJU6 430 aaKnown RBP14.43□□□□□ -0.1
TM9SF4-201ENST00000217315 SERPINC1P01008 464 aa14.43□□□□□ -0.1
TM9SF4-201ENST00000217315 TYRO3Q06418 890 aa14.43□□□□□ -0.1
TM9SF4-201ENST00000217315 NOL10Q9BSC4 688 aaKnown RBP14.43□□□□□ -0.1
TM9SF4-201ENST00000217315 DNAJC25Q9H1X3 360 aa14.43□□□□□ -0.1
TM9SF4-201ENST00000217315 ANO10Q9NW15 660 aa14.43□□□□□ -0.1
TM9SF4-201ENST00000217315 ZFYP08048 801 aaPredicted RBP14.43□□□□□ -0.1
TM9SF4-201ENST00000217315 CLIP2Q9UDT6 1046 aa14.43□□□□□ -0.1
TM9SF4-201ENST00000217315 IFIT3O14879 490 aaKnown RBP14.42□□□□□ -0.1
TM9SF4-201ENST00000217315 RRP9O43818 475 aaKnown RBP14.42□□□□□ -0.1
TM9SF4-201ENST00000217315 HS1BP3Q53T59 392 aa14.42□□□□□ -0.1
TM9SF4-201ENST00000217315 MAP7D2Q96T17 732 aa14.42□□□□□ -0.1
TM9SF4-201ENST00000217315 MTMR6Q9Y217 621 aa14.42□□□□□ -0.1
TM9SF4-201ENST00000217315 CCDC191Q8NCU4 936 aa14.42□□□□□ -0.1
TM9SF4-201ENST00000217315 ZDHHC9Q9Y397 364 aa14.42□□□□□ -0.1
TM9SF4-201ENST00000217315 LARGE1O95461 756 aa14.42□□□□□ -0.1
TM9SF4-201ENST00000217315 AMOTL1Q8IY63 956 aa14.42□□□□□ -0.1
TM9SF4-201ENST00000217315 MAP4K1Q92918 833 aa14.42□□□□□ -0.1
TM9SF4-201ENST00000217315 IQSEC3Q9UPP2 1182 aaPredicted RBP14.42□□□□□ -0.1
TM9SF4-201ENST00000217315 SIGLEC1Q9BZZ2 1709 aa14.41□□□□□ -0.1
TM9SF4-201ENST00000217315 PRC1O43663 620 aa14.41□□□□□ -0.1
TM9SF4-201ENST00000217315 SLC5A1P13866 664 aa14.41□□□□□ -0.1
TM9SF4-201ENST00000217315 ISM2Q6H9L7 571 aa14.41□□□□□ -0.1
TM9SF4-201ENST00000217315 LUZP1Q86V48 1076 aa14.41□□□□□ -0.1
TM9SF4-201ENST00000217315 PIBF1Q8WXW3 757 aa14.41□□□□□ -0.1
TM9SF4-201ENST00000217315 NOL7Q9UMY1 257 aaKnown RBP14.41□□□□□ -0.1
TM9SF4-201ENST00000217315 SPATA31D1Q6ZQQ2 1576 aa14.41□□□□□ -0.1
TM9SF4-201ENST00000217315 ZNF589Q86UQ0 364 aaPredicted RBP14.41□□□□□ -0.1
TM9SF4-201ENST00000217315 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.41□□□□□ -0.1
TM9SF4-201ENST00000217315 CTAGE5O15320 804 aa14.41□□□□□ -0.1
TM9SF4-201ENST00000217315 IGKV5-2P06315 115 aa14.41□□□□□ -0.1
TM9SF4-201ENST00000217315 DNAJC10Q8IXB1 793 aa14.41□□□□□ -0.1
TM9SF4-201ENST00000217315 BRMS1Q9HCU9 246 aa14.41□□□□□ -0.1
TM9SF4-201ENST00000217315 COPRSQ9NQ92 184 aa14.41□□□□□ -0.1
TM9SF4-201ENST00000217315 MYO5BQ9ULV0 1848 aa14.4□□□□□ -0.1
TM9SF4-201ENST00000217315 G3V3G9 751 aa14.4□□□□□ -0.1
TM9SF4-201ENST00000217315 DCAF8Q5TAQ9 597 aa14.4□□□□□ -0.1
TM9SF4-201ENST00000217315 PPP1R9BQ96SB3 815 aa14.4□□□□□ -0.1
TM9SF4-201ENST00000217315 SLC12A7Q9Y666 1083 aa14.4□□□□□ -0.1
TM9SF4-201ENST00000217315 TMEM94Q12767 1356 aa14.4□□□□□ -0.1
TM9SF4-201ENST00000217315 GOLGA8AA7E2F4 631 aa14.4□□□□□ -0.1
TM9SF4-201ENST00000217315 OFD1O75665 1012 aa14.4□□□□□ -0.1
TM9SF4-201ENST00000217315 TMEM67Q5HYA8 995 aa14.4□□□□□ -0.1
TM9SF4-201ENST00000217315 EPHA10Q5JZY3 1008 aa14.4□□□□□ -0.1
TM9SF4-201ENST00000217315 C16orf45Q96MC5 204 aaPredicted RBP14.4□□□□□ -0.1
TM9SF4-201ENST00000217315 METAP2P50579 478 aaKnown RBP eCLIP14.4□□□□□ -0.1
TM9SF4-201ENST00000217315 NOLC1Q14978 699 aaKnown RBP eCLIP14.4□□□□□ -0.13e-6■□□□□ 8.5
TM9SF4-201ENST00000217315 CCDC186Q7Z3E2 898 aa14.4□□□□□ -0.1
TM9SF4-201ENST00000217315 NPHP4O75161 1426 aaPredicted RBP14.4□□□□□ -0.11
TM9SF4-201ENST00000217315 TTF1Q15361 905 aaPredicted RBP14.39□□□□□ -0.11
TM9SF4-201ENST00000217315 MTERF4Q7Z6M4 381 aaKnown RBP14.39□□□□□ -0.11
TM9SF4-201ENST00000217315 IRS4O14654 1257 aaPredicted RBP14.39□□□□□ -0.11
TM9SF4-201ENST00000217315 IARSP41252 1262 aaKnown RBP14.39□□□□□ -0.11
TM9SF4-201ENST00000217315 CCDC112Q8NEF3 446 aa14.39□□□□□ -0.11
TM9SF4-201ENST00000217315 ACSBG1Q96GR2 724 aa14.39□□□□□ -0.11
TM9SF4-201ENST00000217315 RIMBP3CA6NJZ7 1639 aa14.39□□□□□ -0.11
TM9SF4-201ENST00000217315 RIMBP3BA6NNM3 1639 aa14.39□□□□□ -0.11
TM9SF4-201ENST00000217315 RIMBP3Q9UFD9 1639 aa14.39□□□□□ -0.11
TM9SF4-201ENST00000217315 TAF5LO75529 589 aa14.39□□□□□ -0.11
TM9SF4-201ENST00000217315 RXRAP19793 462 aa14.39□□□□□ -0.11
TM9SF4-201ENST00000217315 LRRC24Q50LG9 513 aa14.39□□□□□ -0.11
TM9SF4-201ENST00000217315 IL25Q9H293 177 aa14.39□□□□□ -0.11
TM9SF4-201ENST00000217315 HELLSQ9NRZ9 838 aa14.39□□□□□ -0.11
TM9SF4-201ENST00000217315 IFT172Q9UG01 1749 aa14.39□□□□□ -0.11
TM9SF4-201ENST00000217315 ADCY9O60503 1353 aa14.39□□□□□ -0.11
TM9SF4-201ENST00000217315 MARCH6O60337 910 aa14.38□□□□□ -0.11
TM9SF4-201ENST00000217315 SLC3A2P08195 630 aaKnown RBP14.38□□□□□ -0.11
TM9SF4-201ENST00000217315 TPM1P09493 284 aa14.38□□□□□ -0.11
TM9SF4-201ENST00000217315 XAGE2Q96GT9 111 aa14.38□□□□□ -0.11
TM9SF4-201ENST00000217315 DIP2BQ9P265 1576 aa14.38□□□□□ -0.11
TM9SF4-201ENST00000217315 RAD21O60216 631 aa14.38□□□□□ -0.11
TM9SF4-201ENST00000217315 MTX1Q13505 466 aa14.38□□□□□ -0.11
TM9SF4-201ENST00000217315 STX1AQ16623 288 aa14.38□□□□□ -0.11
TM9SF4-201ENST00000217315 BTG4Q9NY30 223 aa14.38□□□□□ -0.11
TM9SF4-201ENST00000217315 LEO1Q8WVC0 666 aaPredicted RBP14.38□□□□□ -0.11
TM9SF4-201ENST00000217315 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.38□□□□□ -0.11
TM9SF4-201ENST00000217315 OTUD7BQ6GQQ9 843 aa14.38□□□□□ -0.11
TM9SF4-201ENST00000217315 DZIP3Q86Y13 1208 aaKnown RBP14.38□□□□□ -0.11
TM9SF4-201ENST00000217315 RICTORQ6R327 1708 aa14.37□□□□□ -0.11
TM9SF4-201ENST00000217315 CYP27B1O15528 508 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms