RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.58■■□□□ 1.05
SLC22A4-201ENST00000200652 SYTL4Q96C24 671 aaPredicted RBP21.58■■□□□ 1.05
SLC22A4-201ENST00000200652 CDHR2Q9BYE9 1310 aa21.58■■□□□ 1.04
SLC22A4-201ENST00000200652 GADD45BO75293 160 aaPredicted RBP21.57■■□□□ 1.04
SLC22A4-201ENST00000200652 GPTP24298 496 aa21.57■■□□□ 1.04
SLC22A4-201ENST00000200652 NASPP49321 788 aaPredicted RBP21.57■■□□□ 1.04
SLC22A4-201ENST00000200652 SLFNL1Q499Z3 407 aa21.57■■□□□ 1.04
SLC22A4-201ENST00000200652 TMEM87AQ8NBN3 555 aa21.57■■□□□ 1.04
SLC22A4-201ENST00000200652 ZBTB1Q9Y2K1 713 aa21.57■■□□□ 1.04
SLC22A4-201ENST00000200652 SPEF2Q9C093 1822 aa21.57■■□□□ 1.04
SLC22A4-201ENST00000200652 ANKRD36CQ5JPF3 1778 aa21.57■■□□□ 1.04
SLC22A4-201ENST00000200652 CYP21A2P08686 494 aa21.57■■□□□ 1.04
SLC22A4-201ENST00000200652 HSP90AB3PQ58FF7 597 aa21.57■■□□□ 1.04
SLC22A4-201ENST00000200652 ZMYM1Q5SVZ6 1142 aa21.57■■□□□ 1.04
SLC22A4-201ENST00000200652 NEK1Q96PY6 1258 aa21.57■■□□□ 1.04
SLC22A4-201ENST00000200652 MTMR6Q9Y217 621 aa21.57■■□□□ 1.04
SLC22A4-201ENST00000200652 PRIM1P49642 420 aaKnown RBP21.56■■□□□ 1.04
SLC22A4-201ENST00000200652 IFIT5Q13325 482 aaKnown RBP21.56■■□□□ 1.04
SLC22A4-201ENST00000200652 CNPY2Q9Y2B0 182 aa21.56■■□□□ 1.04
SLC22A4-201ENST00000200652 AKAP2Q9Y2D5 859 aa21.56■■□□□ 1.04
SLC22A4-201ENST00000200652 TAF7LQ5H9L4 462 aa21.55■■□□□ 1.04
SLC22A4-201ENST00000200652 NUP98P52948 1817 aa21.55■■□□□ 1.04
SLC22A4-201ENST00000200652 ADORA1P30542 326 aa21.55■■□□□ 1.04
SLC22A4-201ENST00000200652 LRSAM1Q6UWE0 723 aa21.55■■□□□ 1.04
SLC22A4-201ENST00000200652 XAGE2Q96GT9 111 aa21.55■■□□□ 1.04
SLC22A4-201ENST00000200652 ATP6V1DQ9Y5K8 247 aa21.55■■□□□ 1.04
SLC22A4-201ENST00000200652 DOT1LQ8TEK3 1739 aa21.55■■□□□ 1.04
SLC22A4-201ENST00000200652 SYCE3A1L190 88 aa21.54■■□□□ 1.04
SLC22A4-201ENST00000200652 RNF113AO15541 343 aaKnown RBP21.54■■□□□ 1.04
SLC22A4-201ENST00000200652 CCDC158Q5M9N0 1113 aa21.54■■□□□ 1.04
SLC22A4-201ENST00000200652 RBSNQ9H1K0 784 aa21.54■■□□□ 1.04
SLC22A4-201ENST00000200652 TTLL11Q8NHH1 800 aa21.53■■□□□ 1.04
SLC22A4-201ENST00000200652 DSCC1Q9BVC3 393 aa21.53■■□□□ 1.04
SLC22A4-201ENST00000200652 TTC39AQ5SRH9 613 aa21.53■■□□□ 1.04
SLC22A4-201ENST00000200652 RRAGDQ9NQL2 400 aaPredicted RBP21.53■■□□□ 1.04
SLC22A4-201ENST00000200652 MYH3P11055 1940 aa21.52■■□□□ 1.04
SLC22A4-201ENST00000200652 GORABQ5T7V8 394 aa21.52■■□□□ 1.04
SLC22A4-201ENST00000200652 LAMA4Q16363 1823 aa21.52■■□□□ 1.04
SLC22A4-201ENST00000200652 IL6STP40189 918 aaPredicted RBP21.52■■□□□ 1.04
SLC22A4-201ENST00000200652 FKBP4Q02790 459 aaKnown RBP eCLIP21.52■■□□□ 1.04
SLC22A4-201ENST00000200652 LARP1BQ659C4 914 aaKnown RBP21.52■■□□□ 1.04
SLC22A4-201ENST00000200652 GREM2Q9H772 168 aa21.52■■□□□ 1.04
SLC22A4-201ENST00000200652 RIPOR2Q9Y4F9 1068 aa21.52■■□□□ 1.04
SLC22A4-201ENST00000200652 MAST3O60307 1309 aa21.52■■□□□ 1.03
SLC22A4-201ENST00000200652 ERVV-1B6SEH8 477 aa21.51■■□□□ 1.03
SLC22A4-201ENST00000200652 ITGA6P23229 1130 aa21.51■■□□□ 1.03
SLC22A4-201ENST00000200652 CTSWP56202 376 aa21.51■■□□□ 1.03
SLC22A4-201ENST00000200652 STOX1Q6ZVD7 989 aa21.51■■□□□ 1.03
SLC22A4-201ENST00000200652 CDCA7Q9BWT1 371 aaPredicted RBP21.51■■□□□ 1.03
SLC22A4-201ENST00000200652 TBC1D2BQ9UPU7 963 aa21.51■■□□□ 1.03
SLC22A4-201ENST00000200652 RIC1Q4ADV7 1423 aa21.51■■□□□ 1.03
SLC22A4-201ENST00000200652 VPS37CA5D8V6 355 aaPredicted RBP21.51■■□□□ 1.03
SLC22A4-201ENST00000200652 IRS4O14654 1257 aaPredicted RBP21.51■■□□□ 1.03
SLC22A4-201ENST00000200652 HSPD1P10809 573 aaKnown RBP21.51■■□□□ 1.03
SLC22A4-201ENST00000200652 Q6ZUG5 572 aa21.51■■□□□ 1.03
SLC22A4-201ENST00000200652 DZIP3Q86Y13 1208 aaKnown RBP21.51■■□□□ 1.03
SLC22A4-201ENST00000200652 SYAP1Q96A49 352 aaPredicted RBP21.51■■□□□ 1.03
SLC22A4-201ENST00000200652 TRMT112Q9UI30 125 aaKnown RBP21.51■■□□□ 1.03
SLC22A4-201ENST00000200652 ADAMTS2O95450 1211 aa21.5■■□□□ 1.03
SLC22A4-201ENST00000200652 PDIA4P13667 645 aaKnown RBP21.5■■□□□ 1.03
SLC22A4-201ENST00000200652 CCDC173Q0VFZ6 552 aa21.5■■□□□ 1.03
SLC22A4-201ENST00000200652 STK3Q13188 491 aa21.5■■□□□ 1.03
SLC22A4-201ENST00000200652 PPP1R9BQ96SB3 815 aa21.5■■□□□ 1.03
SLC22A4-201ENST00000200652 SPATA31A1Q5TZJ5 1347 aa21.5■■□□□ 1.03
SLC22A4-201ENST00000200652 NRAPQ86VF7 1730 aa21.5■■□□□ 1.03
SLC22A4-201ENST00000200652 LDHAL6AQ6ZMR3 332 aa21.49■■□□□ 1.03
SLC22A4-201ENST00000200652 ANKRD18BA2A2Z9 1011 aa21.49■■□□□ 1.03
SLC22A4-201ENST00000200652 M0R2C6 588 aa21.49■■□□□ 1.03
SLC22A4-201ENST00000200652 DNM1Q05193 864 aaKnown RBP21.49■■□□□ 1.03
SLC22A4-201ENST00000200652 SCARF1Q14162 830 aa21.49■■□□□ 1.03
SLC22A4-201ENST00000200652 PDCP20941 246 aa21.48■■□□□ 1.03
SLC22A4-201ENST00000200652 DDB1Q16531 1140 aa21.48■■□□□ 1.03
SLC22A4-201ENST00000200652 METTL24Q5JXM2 366 aa21.48■■□□□ 1.03
SLC22A4-201ENST00000200652 OSBP2Q969R2 916 aa21.48■■□□□ 1.03
SLC22A4-201ENST00000200652 THRAP3Q9Y2W1 955 aaKnown RBP21.48■■□□□ 1.03
SLC22A4-201ENST00000200652 UBN2Q6ZU65 1347 aa21.48■■□□□ 1.03
SLC22A4-201ENST00000200652 FIBPO43427 364 aa21.48■■□□□ 1.03
SLC22A4-201ENST00000200652 HMGB1P09429 215 aaKnown RBP21.48■■□□□ 1.03
SLC22A4-201ENST00000200652 UBE2HP62256 183 aa21.48■■□□□ 1.03
SLC22A4-201ENST00000200652 ATP2B3Q16720 1220 aa21.48■■□□□ 1.03
SLC22A4-201ENST00000200652 ZNF34Q8IZ26 560 aa21.48■■□□□ 1.03
SLC22A4-201ENST00000200652 ANP32BQ92688 251 aaKnown RBP21.48■■□□□ 1.03
SLC22A4-201ENST00000200652 GTF3C6Q969F1 213 aa21.48■■□□□ 1.03
SLC22A4-201ENST00000200652 PDE8AO60658 829 aa21.47■■□□□ 1.03
SLC22A4-201ENST00000200652 LRRFIP1Q32MZ4 808 aaKnown RBP21.47■■□□□ 1.03
SLC22A4-201ENST00000200652 A0A0G2JLW4 131 aa21.47■■□□□ 1.03
SLC22A4-201ENST00000200652 ZAP70P43403 619 aa21.47■■□□□ 1.03
SLC22A4-201ENST00000200652 CDC37L1Q7L3B6 337 aa21.47■■□□□ 1.03
SLC22A4-201ENST00000200652 DHX32Q7L7V1 743 aaKnown RBP21.47■■□□□ 1.03
SLC22A4-201ENST00000200652 ABCC12Q96J65 1359 aa21.46■■□□□ 1.03
SLC22A4-201ENST00000200652 PHLPP1O60346 1717 aa21.46■■□□□ 1.03
SLC22A4-201ENST00000200652 EIF5P55010 431 aaKnown RBP21.46■■□□□ 1.03
SLC22A4-201ENST00000200652 LRRC2Q9BYS8 371 aa21.46■■□□□ 1.03
SLC22A4-201ENST00000200652 CNNM1Q9NRU3 951 aa21.46■■□□□ 1.03
SLC22A4-201ENST00000200652 ZFYP08048 801 aaPredicted RBP21.45■■□□□ 1.03
SLC22A4-201ENST00000200652 INTS5Q6P9B9 1019 aaKnown RBP21.45■■□□□ 1.03
SLC22A4-201ENST00000200652 VGLL2Q8N8G2 317 aa21.45■■□□□ 1.03
SLC22A4-201ENST00000200652 BRF1Q92994 677 aa21.45■■□□□ 1.03
SLC22A4-201ENST00000200652 TRIM44Q96DX7 344 aaPredicted RBP21.45■■□□□ 1.03
SLC22A4-201ENST00000200652 LTBP4Q8N2S1 1624 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms