RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 DACH1Q9UI36 760 aa13.23□□□□□ -0.29
PKP2-201ENST00000070846 NLRP1Q9C000 1473 aa13.23□□□□□ -0.29
PKP2-201ENST00000070846 TCIRG1Q13488 830 aa13.23□□□□□ -0.29
PKP2-201ENST00000070846 KLHL10Q6JEL2 608 aa13.23□□□□□ -0.29
PKP2-201ENST00000070846 MPNDQ8N594 471 aa13.23□□□□□ -0.29
PKP2-201ENST00000070846 DCTPP1Q9H773 170 aa13.23□□□□□ -0.29
PKP2-201ENST00000070846 NUP62CLQ9H1M0 184 aa13.23□□□□□ -0.29
PKP2-201ENST00000070846 INSRP06213 1382 aa13.22□□□□□ -0.29
PKP2-201ENST00000070846 PPIP5K2O43314 1243 aa13.22□□□□□ -0.29
PKP2-201ENST00000070846 NLGN1Q8N2Q7 840 aa13.22□□□□□ -0.29
PKP2-201ENST00000070846 VTI1AQ96AJ9 217 aa13.22□□□□□ -0.29
PKP2-201ENST00000070846 TSPY26PQ9H489 355 aa13.22□□□□□ -0.29
PKP2-201ENST00000070846 DENND2AQ9ULE3 1009 aa13.22□□□□□ -0.29
PKP2-201ENST00000070846 WDR17Q8IZU2 1322 aa13.22□□□□□ -0.29
PKP2-201ENST00000070846 PUM3Q15397 648 aaKnown RBP13.22□□□□□ -0.29
PKP2-201ENST00000070846 TTC6Q86TZ1 520 aa13.22□□□□□ -0.29
PKP2-201ENST00000070846 USPL1Q5W0Q7 1092 aa13.22□□□□□ -0.29
PKP2-201ENST00000070846 SMARCE1Q969G3 411 aa13.22□□□□□ -0.29
PKP2-201ENST00000070846 CNNM2Q9H8M5 875 aa13.22□□□□□ -0.29
PKP2-201ENST00000070846 ZBTB40Q9NUA8 1239 aa13.22□□□□□ -0.29
PKP2-201ENST00000070846 UBA7P41226 1012 aa13.21□□□□□ -0.29
PKP2-201ENST00000070846 TMTC2Q8N394 836 aa13.21□□□□□ -0.29
PKP2-201ENST00000070846 DEF6Q9H4E7 631 aa13.21□□□□□ -0.29
PKP2-201ENST00000070846 NPC1L1Q9UHC9 1359 aa13.21□□□□□ -0.29
PKP2-201ENST00000070846 BAG4O95429 457 aaKnown RBP13.21□□□□□ -0.29
PKP2-201ENST00000070846 NMIQ13287 307 aaPredicted RBP13.21□□□□□ -0.29
PKP2-201ENST00000070846 CHST3Q7LGC8 479 aa13.21□□□□□ -0.29
PKP2-201ENST00000070846 UNC5CLQ8IV45 518 aa13.21□□□□□ -0.29
PKP2-201ENST00000070846 NECAB1Q8N987 351 aa13.21□□□□□ -0.29
PKP2-201ENST00000070846 TCP11L1Q9NUJ3 509 aa13.21□□□□□ -0.29
PKP2-201ENST00000070846 CHD1O14646 1710 aa13.21□□□□□ -0.29
PKP2-201ENST00000070846 RNF113AO15541 343 aaKnown RBP13.21□□□□□ -0.29
PKP2-201ENST00000070846 ALDH1B1P30837 517 aa13.21□□□□□ -0.29
PKP2-201ENST00000070846 NOM1Q5C9Z4 860 aaKnown RBP13.21□□□□□ -0.29
PKP2-201ENST00000070846 NIM1KQ8IY84 436 aa13.21□□□□□ -0.29
PKP2-201ENST00000070846 SCAND2PQ9GZW5 306 aaPredicted RBP13.21□□□□□ -0.29
PKP2-201ENST00000070846 CIZ1Q9ULV3 898 aaPredicted RBP13.21□□□□□ -0.29
PKP2-201ENST00000070846 ERBB3P21860 1342 aa13.21□□□□□ -0.3
PKP2-201ENST00000070846 MBD4O95243 580 aa13.21□□□□□ -0.3
PKP2-201ENST00000070846 SPC24Q8NBT2 197 aa13.21□□□□□ -0.3
PKP2-201ENST00000070846 SUCLG2Q96I99 432 aa13.21□□□□□ -0.3
PKP2-201ENST00000070846 ZBTB1Q9Y2K1 713 aa13.21□□□□□ -0.3
PKP2-201ENST00000070846 RAB3GAP1Q15042 981 aa13.2□□□□□ -0.3
PKP2-201ENST00000070846 PPFIBP1Q86W92 1011 aa13.2□□□□□ -0.3
PKP2-201ENST00000070846 SEPT11Q9NVA2 429 aaKnown RBP13.2□□□□□ -0.3
PKP2-201ENST00000070846 CCDC39Q9UFE4 941 aa13.2□□□□□ -0.3
PKP2-201ENST00000070846 CCDC173Q0VFZ6 552 aa13.2□□□□□ -0.3
PKP2-201ENST00000070846 CAMK4Q16566 473 aa13.2□□□□□ -0.3
PKP2-201ENST00000070846 RTN1Q16799 776 aa13.2□□□□□ -0.3
PKP2-201ENST00000070846 ARHGAP27Q6ZUM4 889 aa13.2□□□□□ -0.3
PKP2-201ENST00000070846 CKAP2LQ8IYA6 745 aa13.2□□□□□ -0.3
PKP2-201ENST00000070846 SAP30BPQ9UHR5 308 aaKnown RBP13.2□□□□□ -0.3
PKP2-201ENST00000070846 SAMD9LQ8IVG5 1584 aa13.2□□□□□ -0.3
PKP2-201ENST00000070846 ERVK-7P63135 1459 aa13.2□□□□□ -0.3
PKP2-201ENST00000070846 GNAQP50148 359 aa13.2□□□□□ -0.3
PKP2-201ENST00000070846 TRAF1Q13077 416 aa13.2□□□□□ -0.3
PKP2-201ENST00000070846 PPP4R3BQ5MIZ7 849 aa13.2□□□□□ -0.3
PKP2-201ENST00000070846 HEATR3Q7Z4Q2 680 aa13.2□□□□□ -0.3
PKP2-201ENST00000070846 ESYT1Q9BSJ8 1104 aa13.19□□□□□ -0.3
PKP2-201ENST00000070846 MYO5CQ9NQX4 1742 aa13.19□□□□□ -0.3
PKP2-201ENST00000070846 PPP1R12BO60237 982 aaPredicted RBP13.19□□□□□ -0.3
PKP2-201ENST00000070846 GNAT2P19087 354 aa13.19□□□□□ -0.3
PKP2-201ENST00000070846 EAPPQ56P03 285 aaPredicted RBP13.19□□□□□ -0.3
PKP2-201ENST00000070846 TMEM87AQ8NBN3 555 aa13.19□□□□□ -0.3
PKP2-201ENST00000070846 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.19□□□□□ -0.32e-7■■■■■ 28.3
PKP2-201ENST00000070846 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.19□□□□□ -0.3
PKP2-201ENST00000070846 PDE6BP35913 854 aa13.19□□□□□ -0.3
PKP2-201ENST00000070846 CRKLP46109 303 aaKnown RBP13.19□□□□□ -0.3
PKP2-201ENST00000070846 XAGE2Q96GT9 111 aa13.19□□□□□ -0.3
PKP2-201ENST00000070846 TTC41PQ6P2S7 1318 aa13.19□□□□□ -0.3
PKP2-201ENST00000070846 TTC37Q6PGP7 1564 aa13.18□□□□□ -0.3
PKP2-201ENST00000070846 CCDC178Q5BJE1 867 aa13.18□□□□□ -0.3
PKP2-201ENST00000070846 WDR66Q8TBY9 1149 aa13.18□□□□□ -0.3
PKP2-201ENST00000070846 MPHOSPH6Q99547 160 aaKnown RBP13.18□□□□□ -0.3
PKP2-201ENST00000070846 FBXO3Q9UK99 471 aa13.18□□□□□ -0.3
PKP2-201ENST00000070846 PRC1O43663 620 aa13.18□□□□□ -0.3
PKP2-201ENST00000070846 GTF2IP78347 998 aa13.18□□□□□ -0.3
PKP2-201ENST00000070846 TCP10Q12799 353 aa13.18□□□□□ -0.3
PKP2-201ENST00000070846 C2CD5Q86YS7 1000 aa13.18□□□□□ -0.3
PKP2-201ENST00000070846 BIN2Q9UBW5 565 aaPredicted RBP13.18□□□□□ -0.3
PKP2-201ENST00000070846 ATF5Q9Y2D1 282 aaPredicted RBP13.18□□□□□ -0.3
PKP2-201ENST00000070846 ZBTB7BO15156 539 aaPredicted RBP13.18□□□□□ -0.3
PKP2-201ENST00000070846 GJB2P29033 226 aa13.18□□□□□ -0.3
PKP2-201ENST00000070846 MRE11P49959 708 aa13.18□□□□□ -0.3
PKP2-201ENST00000070846 EIF5P55010 431 aaKnown RBP13.18□□□□□ -0.3
PKP2-201ENST00000070846 FILIP1Q7Z7B0 1213 aa13.18□□□□□ -0.3
PKP2-201ENST00000070846 MNS1Q8NEH6 495 aa13.18□□□□□ -0.3
PKP2-201ENST00000070846 LPIN2Q92539 896 aa13.18□□□□□ -0.3
PKP2-201ENST00000070846 GDPD2Q9HCC8 539 aa13.18□□□□□ -0.3
PKP2-201ENST00000070846 KDM5DQ9BY66 1539 aa13.18□□□□□ -0.3
PKP2-201ENST00000070846 ZYXQ15942 572 aaKnown RBP13.18□□□□□ -0.3
PKP2-201ENST00000070846 TNNI3KQ59H18 835 aa13.18□□□□□ -0.3
PKP2-201ENST00000070846 FPGT-TNNI3KV9GXZ4 949 aa13.18□□□□□ -0.3
PKP2-201ENST00000070846 AFF2P51816 1311 aa13.17□□□□□ -0.3
PKP2-201ENST00000070846 PRDM1O75626 825 aa13.17□□□□□ -0.3
PKP2-201ENST00000070846 SUPT20HQ8NEM7 779 aa13.17□□□□□ -0.3
PKP2-201ENST00000070846 CFAP74Q9C0B2 1584 aa13.17□□□□□ -0.3
PKP2-201ENST00000070846 H7C1D1 291 aa13.17□□□□□ -0.3
PKP2-201ENST00000070846 DPY19L2Q6NUT2 758 aa13.17□□□□□ -0.3
PKP2-201ENST00000070846 NDUFB9Q9Y6M9 179 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms