RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 MARCH6O60337 910 aa14.11□□□□□ -0.15
TSPAN9-201ENST00000011898 SART3Q15020 963 aaKnown RBP14.11□□□□□ -0.15
TSPAN9-201ENST00000011898 JMYQ8N9B5 988 aa14.11□□□□□ -0.15
TSPAN9-201ENST00000011898 AXIN2Q9Y2T1 843 aa14.11□□□□□ -0.15
TSPAN9-201ENST00000011898 SHPRHQ149N8 1683 aa14.11□□□□□ -0.15
TSPAN9-201ENST00000011898 ZSCAN22P10073 491 aaPredicted RBP14.1□□□□□ -0.15
TSPAN9-201ENST00000011898 USP48Q86UV5 1035 aa14.1□□□□□ -0.15
TSPAN9-201ENST00000011898 CEP57L1Q8IYX8 460 aa14.1□□□□□ -0.15
TSPAN9-201ENST00000011898 TCEANC2Q96MN5 208 aa14.1□□□□□ -0.15
TSPAN9-201ENST00000011898 LTN1O94822 1766 aa14.1□□□□□ -0.15
TSPAN9-201ENST00000011898 KIF2AO00139 706 aaPredicted RBP14.1□□□□□ -0.15
TSPAN9-201ENST00000011898 KIF6Q6ZMV9 814 aa14.1□□□□□ -0.15
TSPAN9-201ENST00000011898 NECAB1Q8N987 351 aa14.1□□□□□ -0.15
TSPAN9-201ENST00000011898 C8orf37Q96NL8 207 aa14.1□□□□□ -0.15
TSPAN9-201ENST00000011898 CTNNA3Q9UI47 895 aa14.1□□□□□ -0.15
TSPAN9-201ENST00000011898 SPATA31A6Q5VVP1 1343 aa14.1□□□□□ -0.15
TSPAN9-201ENST00000011898 CHMLP26374 656 aa14.1□□□□□ -0.15
TSPAN9-201ENST00000011898 GIMAP6Q6P9H5 292 aa14.1□□□□□ -0.15
TSPAN9-201ENST00000011898 ZBTB9Q96C00 473 aa14.1□□□□□ -0.15
TSPAN9-201ENST00000011898 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.1□□□□□ -0.15
TSPAN9-201ENST00000011898 A0A087WZG4 1122 aa14.09□□□□□ -0.15
TSPAN9-201ENST00000011898 GABPB1Q06547 395 aaPredicted RBP14.09□□□□□ -0.15
TSPAN9-201ENST00000011898 UTP14CQ5TAP6 766 aaKnown RBP14.09□□□□□ -0.15
TSPAN9-201ENST00000011898 U3KPZ7 1027 aaPredicted RBP14.09□□□□□ -0.15
TSPAN9-201ENST00000011898 CEP135Q66GS9 1140 aa14.09□□□□□ -0.15
TSPAN9-201ENST00000011898 GTF3C6Q969F1 213 aa14.09□□□□□ -0.15
TSPAN9-201ENST00000011898 CNPY2Q9Y2B0 182 aa14.09□□□□□ -0.15
TSPAN9-201ENST00000011898 PAXBP1Q9Y5B6 917 aa14.09□□□□□ -0.15
TSPAN9-201ENST00000011898 SERPINC1P01008 464 aa14.08□□□□□ -0.16
TSPAN9-201ENST00000011898 IL2RBP14784 551 aa14.08□□□□□ -0.16
TSPAN9-201ENST00000011898 BRD2P25440 801 aaKnown RBP14.08□□□□□ -0.16
TSPAN9-201ENST00000011898 PEAK1Q9H792 1746 aa14.08□□□□□ -0.16
TSPAN9-201ENST00000011898 ABCC6O95255 1503 aa14.08□□□□□ -0.16
TSPAN9-201ENST00000011898 XBP1P17861 261 aa14.08□□□□□ -0.16
TSPAN9-201ENST00000011898 GUCY1B3Q02153 619 aa14.08□□□□□ -0.16
TSPAN9-201ENST00000011898 PHRF1Q9P1Y6 1649 aaKnown RBP14.08□□□□□ -0.16
TSPAN9-201ENST00000011898 HSPA1LP34931 641 aa14.08□□□□□ -0.16
TSPAN9-201ENST00000011898 MICALL1Q8N3F8 863 aa14.08□□□□□ -0.16
TSPAN9-201ENST00000011898 C17orf53Q8N3J3 647 aaPredicted RBP14.08□□□□□ -0.16
TSPAN9-201ENST00000011898 CARD10Q9BWT7 1032 aa14.08□□□□□ -0.16
TSPAN9-201ENST00000011898 KDRP35968 1356 aa14.08□□□□□ -0.16
TSPAN9-201ENST00000011898 MAP3K5Q99683 1374 aa14.08□□□□□ -0.16
TSPAN9-201ENST00000011898 UBE3BQ7Z3V4 1068 aa14.07□□□□□ -0.16
TSPAN9-201ENST00000011898 STK11IPQ8N1F8 1099 aa14.07□□□□□ -0.16
TSPAN9-201ENST00000011898 JARID2Q92833 1246 aaPredicted RBP14.07□□□□□ -0.16
TSPAN9-201ENST00000011898 PHAXQ9H814 394 aaKnown RBP14.07□□□□□ -0.16
TSPAN9-201ENST00000011898 CLIP2Q9UDT6 1046 aa14.07□□□□□ -0.16
TSPAN9-201ENST00000011898 SHTN1A0MZ66 631 aa14.07□□□□□ -0.16
TSPAN9-201ENST00000011898 AKAP4Q5JQC9 854 aa14.07□□□□□ -0.16
TSPAN9-201ENST00000011898 CCDC91Q7Z6B0 441 aa14.07□□□□□ -0.16
TSPAN9-201ENST00000011898 ATP5J2-PTCD1G3V325 749 aa14.07□□□□□ -0.16
TSPAN9-201ENST00000011898 IFIT1P09914 478 aaKnown RBP14.07□□□□□ -0.16
TSPAN9-201ENST00000011898 PA2G4Q9UQ80 394 aaKnown RBP14.07□□□□□ -0.16
TSPAN9-201ENST00000011898 IFNL2Q8IZJ0 200 aa14.06□□□□□ -0.16
TSPAN9-201ENST00000011898 INTS4Q96HW7 963 aaKnown RBP14.06□□□□□ -0.16
TSPAN9-201ENST00000011898 PCMTD1Q96MG8 357 aaPredicted RBP14.06□□□□□ -0.16
TSPAN9-201ENST00000011898 SOS1Q07889 1333 aaPredicted RBP14.06□□□□□ -0.16
TSPAN9-201ENST00000011898 CCT2P78371 535 aaKnown RBP14.06□□□□□ -0.16
TSPAN9-201ENST00000011898 IMMTQ16891 758 aaKnown RBP14.06□□□□□ -0.16
TSPAN9-201ENST00000011898 ZNF397Q8NF99 534 aaPredicted RBP14.06□□□□□ -0.16
TSPAN9-201ENST00000011898 CDCA7Q9BWT1 371 aaPredicted RBP14.06□□□□□ -0.16
TSPAN9-201ENST00000011898 FAM107BQ9H098 131 aa14.06□□□□□ -0.16
TSPAN9-201ENST00000011898 RBM8AQ9Y5S9 174 aaKnown RBP14.06□□□□□ -0.16
TSPAN9-201ENST00000011898 RIOK3O14730 519 aaKnown RBP14.06□□□□□ -0.16
TSPAN9-201ENST00000011898 PPFIA3O75145 1194 aa14.06□□□□□ -0.16
TSPAN9-201ENST00000011898 IDH1O75874 414 aaKnown RBP14.06□□□□□ -0.16
TSPAN9-201ENST00000011898 CAPN2P17655 700 aa14.06□□□□□ -0.16
TSPAN9-201ENST00000011898 UVSSAQ2YD98 709 aa14.06□□□□□ -0.16
TSPAN9-201ENST00000011898 RBSNQ9H1K0 784 aa14.06□□□□□ -0.16
TSPAN9-201ENST00000011898 DDX19AQ9NUU7 478 aaKnown RBP14.06□□□□□ -0.16
TSPAN9-201ENST00000011898 SFPQP23246 707 aaKnown RBP eCLIP14.05□□□□□ -0.16
TSPAN9-201ENST00000011898 ZNF165P49910 485 aa14.05□□□□□ -0.16
TSPAN9-201ENST00000011898 KRBA2Q6ZNG9 492 aa14.05□□□□□ -0.16
TSPAN9-201ENST00000011898 ZCRB1Q8TBF4 217 aaKnown RBP14.05□□□□□ -0.16
TSPAN9-201ENST00000011898 GSPT1P15170 499 aaKnown RBP14.05□□□□□ -0.16
TSPAN9-201ENST00000011898 AK2P54819 239 aa14.05□□□□□ -0.16
TSPAN9-201ENST00000011898 DNM1Q05193 864 aaKnown RBP14.05□□□□□ -0.16
TSPAN9-201ENST00000011898 JAKMIP3Q5VZ66 844 aa14.05□□□□□ -0.16
TSPAN9-201ENST00000011898 CCDC186Q7Z3E2 898 aa14.05□□□□□ -0.16
TSPAN9-201ENST00000011898 BCL2L12Q9HB09 334 aa14.05□□□□□ -0.16
TSPAN9-201ENST00000011898 NF2P35240 595 aa14.05□□□□□ -0.16
TSPAN9-201ENST00000011898 TRIM22Q8IYM9 498 aa14.05□□□□□ -0.16
TSPAN9-201ENST00000011898 NEK1Q96PY6 1258 aa14.05□□□□□ -0.16
TSPAN9-201ENST00000011898 SRRTQ9BXP5 876 aaKnown RBP14.05□□□□□ -0.16
TSPAN9-201ENST00000011898 HMGB1P09429 215 aaKnown RBP14.04□□□□□ -0.16
TSPAN9-201ENST00000011898 RNF187Q5TA31 235 aaPredicted RBP14.04□□□□□ -0.16
TSPAN9-201ENST00000011898 AMOTL1Q8IY63 956 aa14.04□□□□□ -0.16
TSPAN9-201ENST00000011898 CRACR2AQ9BSW2 395 aa14.04□□□□□ -0.16
TSPAN9-201ENST00000011898 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.04□□□□□ -0.16
TSPAN9-201ENST00000011898 ABCC4O15439 1325 aa14.04□□□□□ -0.16
TSPAN9-201ENST00000011898 GRM8O00222 908 aa14.04□□□□□ -0.16
TSPAN9-201ENST00000011898 BRMS1Q9HCU9 246 aa14.04□□□□□ -0.16
TSPAN9-201ENST00000011898 KSR2Q6VAB6 950 aa14.04□□□□□ -0.16
TSPAN9-201ENST00000011898 PNMA6EA0A0J9YXQ4 647 aa14.04□□□□□ -0.16
TSPAN9-201ENST00000011898 A0A1B0GUL7 405 aa14.04□□□□□ -0.16
TSPAN9-201ENST00000011898 GOLIM4O00461 696 aa14.04□□□□□ -0.16
TSPAN9-201ENST00000011898 F13A1P00488 732 aa14.04□□□□□ -0.16
TSPAN9-201ENST00000011898 IVLP07476 585 aa14.04□□□□□ -0.16
TSPAN9-201ENST00000011898 SSR1P43307 286 aaKnown RBP14.04□□□□□ -0.16
TSPAN9-201ENST00000011898 ZSCAN25Q6NSZ9 544 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms