RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Rbm26Q6NZN0 1012 aaKnown RBP17.15■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Ubxn10Q8BG34 277 aa17.15■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Kif13bA0A286YCV9 1847 aa17.15■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Nup98Q6PFD9 1816 aaKnown RBP17.15■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Rasa1E9PYG6 1038 aa17.14■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Il4rP16382 810 aa17.14■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Rab3gap1Q80UJ7 981 aa17.14■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Cyp3a57D3YYZ0 503 aa17.14■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Ubap1lG3UW59 384 aa17.14■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Vwa3bJ9JI28 736 aa17.14■□□□□ 0.33
Ssr1-204ENSMUST00000225319 ImpactO55091 318 aa17.14■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Atp6v1dP57746 247 aa17.14■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Fam160b2Q80YR2 744 aa17.14■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Ppp4r3bQ922R5 820 aa17.14■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Rtn4Q99P72 1162 aaKnown RBP17.14■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Tktl2Q9D4D4 627 aa17.14■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Setdb1O88974 1307 aa17.13■□□□□ 0.33
Ssr1-204ENSMUST00000225319 TnksQ6PFX9 1320 aa17.13■□□□□ 0.33
Ssr1-204ENSMUST00000225319 MeiocA2AG06 965 aa17.13■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Aknad1E9Q8N6 675 aa17.13■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Speer4dL7N216 212 aa17.13■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Smarce1O54941 411 aaKnown RBP17.13■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Stk11ipQ3TAA7 1072 aa17.13■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Il17raQ60943 864 aa17.13■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Arid3aQ62431 601 aa17.13■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Tmx3Q8BXZ1 456 aa17.13■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Riok1Q922Q2 567 aa17.13■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Dbndd1Q9CZ00 160 aa17.13■□□□□ 0.33
Ssr1-204ENSMUST00000225319 PhaxQ9JJT9 385 aaKnown RBP17.13■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Mlh1Q9JK91 760 aa17.13■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Ccne2Q9Z238 404 aa17.13■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Heg1E9Q7X6 1337 aa17.12■□□□□ 0.33
Ssr1-204ENSMUST00000225319 1700029H14RikE9PY36 240 aa17.12■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Gm4340L7N2C4 268 aa17.12■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Mdm2P23804 489 aa17.12■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Ddx46Q569Z5 1032 aaKnown RBP17.12■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Ifit2Q64112 472 aa17.12■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Add2Q9QYB8 725 aa17.12■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Gja10Q9WUS4 505 aa17.12■□□□□ 0.33
Ssr1-204ENSMUST00000225319 GabrdP22933 449 aa17.11■□□□□ 0.33
Ssr1-204ENSMUST00000225319 NppbP40753 121 aa17.11■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Abtb2Q7TQI7 1024 aa17.11■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Jakmip1Q8BVL9 626 aa17.11■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Slc39a11Q8BWY7 342 aa17.11■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Golim4Q8BXA1 655 aa17.11■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Nek11Q8C0Q4 628 aa17.11■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Sh3bp5Q9Z131 463 aa17.11■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Adamtsl1Q8BLI0 1745 aa17.1■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Prl3d1P18121 224 aa17.1■□□□□ 0.33
Ssr1-204ENSMUST00000225319 RubcnlQ3TD16 648 aa17.1■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Nlrp9aQ66X03 949 aa17.1■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Sptlc3Q8BG54 563 aa17.1■□□□□ 0.33
Ssr1-204ENSMUST00000225319 KinQ8K339 391 aa17.1■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Tmem143Q8VD26 458 aa17.1■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Erc1Q99MI1 1120 aa17.1■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Ube3bQ9ES34 1070 aa17.1■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Myh3P13541 1940 aa17.09■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Znf496Q5SXI5 585 aa17.09■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Kiaa0753Q6A000 959 aa17.09■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Tshz3Q8CGV9 1081 aa17.09■□□□□ 0.33
Ssr1-204ENSMUST00000225319 StrbpQ91WM1 672 aaKnown RBP17.09■□□□□ 0.33
Ssr1-204ENSMUST00000225319 Zdhhc9P59268 364 aa17.08■□□□□ 0.32
Ssr1-204ENSMUST00000225319 NpeppsQ11011 920 aa17.08■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Fam198bQ3UPI1 517 aa17.08■□□□□ 0.32
Ssr1-204ENSMUST00000225319 EappQ5BU09 281 aa17.08■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Nme8Q715T0 586 aa17.08■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Mb21d2Q8C525 428 aa17.08■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Sumf1Q8R0F3 372 aa17.08■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Ambra1A2AH22 1300 aa17.08■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Rbm8a2A0A0N4SUH6 174 aa17.07■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Fbln2P37889 1221 aa17.07■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Filip1lQ6P6L0 1131 aa17.07■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Rbm8aQ9CWZ3 174 aa17.07■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Ccdc7Q9D541 371 aa17.07■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Kcnn1Q9EQR3 537 aa17.07■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Ak2Q9WTP6 239 aa17.07■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Lgr5Q9Z1P4 907 aa17.07■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Gm45015A0A140LII9 184 aa17.07■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Gm18336A0A140LIU8 765 aa17.07■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Kcnb2A6H8H5 907 aa17.07■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Tlr8P58682 1032 aa17.07■□□□□ 0.32
Ssr1-204ENSMUST00000225319 VeztQ3ZK22 780 aa17.07■□□□□ 0.32
Ssr1-204ENSMUST00000225319 McamQ8R2Y2 648 aaKnown RBP17.07■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Sh3tc1G3X9F6 1346 aa17.06■□□□□ 0.32
Ssr1-204ENSMUST00000225319 MecomP14404 1042 aa17.06■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Cyp2d10P24456 504 aa17.06■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Ddx19aQ61655 478 aaKnown RBP17.06■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Amer1Q7TS75 1132 aa17.06■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Map10Q8BJS7 891 aa17.06■□□□□ 0.32
Ssr1-204ENSMUST00000225319 SnrkQ8VDU5 748 aa17.06■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Fam84aQ9D650 292 aa17.06■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Gdpd2Q9ESM6 539 aa17.06■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Myh15E9Q264 1925 aa17.06■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Arfgef1G3X9K3 1846 aaKnown RBP17.05■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Rps8P62242 208 aaKnown RBP17.05■□□□□ 0.32
Ssr1-204ENSMUST00000225319 St18Q80TY4 1045 aa17.05■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Pdcl3Q8BVF2 240 aa17.05■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Sde2Q8K1J5 448 aaKnown RBP17.05■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Akt1s1Q9D1F4 257 aa17.05■□□□□ 0.32
Ssr1-204ENSMUST00000225319 Hmg20bQ9Z104 317 aa17.05■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 58.4 ms