RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Rdm1Q9CQK3 281 aa18.48■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Lins1Q3U1D0 764 aa18.47■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Sh3bp5Q9Z131 463 aa18.47■□□□□ 0.55
Sdc1-205ENSMUST00000171158 TrdnE9Q9K5 693 aa18.46■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Lnx1O70263 728 aa18.46■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Slc4a1P04919 929 aa18.46■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Gse1Q3U3C9 1213 aa18.46■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Ttc27Q8CD92 847 aa18.46■□□□□ 0.55
Sdc1-205ENSMUST00000171158 ZgpatQ8VDM1 511 aa18.46■□□□□ 0.55
Sdc1-205ENSMUST00000171158 EzrP26040 586 aaKnown RBP18.46■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Hspd1P63038 573 aaKnown RBP18.46■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Gm21985Q6P6P5 1106 aa18.46■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Ankib1Q6ZPS6 1085 aa18.46■□□□□ 0.55
Sdc1-205ENSMUST00000171158 R3hcc1Q8BSI6 488 aa18.46■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Zfp317Q8C0Q5 607 aa18.46■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Crb1Q8VHS2 1405 aa18.45■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Cdhr2E9Q7P9 1308 aa18.45■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Exosc10P56960 887 aaKnown RBP18.45■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Limch1Q3UH68 1057 aa18.45■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Gm12185Q5NCB2 835 aa18.45■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Mylk2Q8VCR8 613 aa18.45■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Ripk4Q9ERK0 786 aa18.45■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Mmel1Q9JLI3 765 aa18.45■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Nav1Q8CH77 1875 aa18.45■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Bach1P97302 739 aa18.45■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Mctp2Q5RJH2 878 aa18.45■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Rbm17Q8JZX4 405 aaKnown RBP18.45■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Ppil4Q9CXG3 492 aaKnown RBP18.45■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Arap2Q8BZ05 1703 aa18.45■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Zkscan7E9PVW1 718 aa18.44■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Pdia4P08003 638 aaKnown RBP18.44■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Tyro3P55144 880 aa18.44■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Ttc19Q8CC21 365 aa18.44■□□□□ 0.54
Sdc1-205ENSMUST00000171158 BrapQ99MP8 591 aa18.44■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Fam84aQ9D650 292 aa18.44■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Pde3aQ9Z0X4 1141 aa18.44■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Csrnp1P59054 583 aa18.44■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Brinp3Q499E0 766 aa18.44■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Ltv1Q6NSQ7 470 aaKnown RBP18.44■□□□□ 0.54
Sdc1-205ENSMUST00000171158 TnmdQ9EP64 317 aa18.44■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Nwd2Q6P5U7 1742 aa18.43■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Usp42B2RQC2 1324 aaKnown RBP18.43■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Pard3Q99NH2 1333 aa18.43■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Cers3Q1A3B0 383 aa18.43■□□□□ 0.54
Sdc1-205ENSMUST00000171158 AidaQ8C4Q6 305 aa18.43■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Atad2Q8CDM1 1040 aa18.43■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Ncoa5Q91W39 579 aaKnown RBP18.43■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Cap2Q9CYT6 476 aa18.43■□□□□ 0.54
Sdc1-205ENSMUST00000171158 TnksQ6PFX9 1320 aa18.42■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Brpf3B2KF05 1204 aaKnown RBP18.42■□□□□ 0.54
Sdc1-205ENSMUST00000171158 1700113H08RikE9Q9Q5 327 aa18.42■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Cfap157Q0VFX2 523 aa18.42■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Pip4k2bQ80XI4 416 aa18.42■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Acsbg1Q99PU5 721 aa18.42■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Mrpl44Q9CY73 333 aaKnown RBP18.42■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Cyb5rlB1AS42 316 aa18.41■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Cyp2d34L7N463 504 aa18.41■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Usp28Q5I043 1051 aa18.41■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Trim56Q80VI1 734 aaKnown RBP18.41■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Nfe2l3Q9WTM4 660 aa18.41■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Bicd2Q921C5 820 aa18.41■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Trim59Q922Y2 403 aa18.41■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Myh7Q91Z83 1935 aa18.4■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Rgs9O54828 675 aa18.4■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Ccnl1Q52KE7 532 aaKnown RBP18.4■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Oxsr1Q6P9R2 527 aa18.4■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Nxf7Q80SZ6 620 aaKnown RBP18.4■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Ncaph2Q8BSP2 607 aa18.4■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Pms1Q8K119 917 aa18.4■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Mctp1E9PV86 951 aa18.4■□□□□ 0.54
Sdc1-205ENSMUST00000171158 NcapgE9PWG6 1004 aa18.4■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Hmx1O70218 332 aa18.4■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Cct2P80314 535 aaKnown RBP18.4■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Ifit1Q64282 463 aa18.4■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Clca2Q8BG22 942 aa18.4■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Mtmr3Q8K296 1196 aa18.4■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Ppp4r3bQ922R5 820 aa18.4■□□□□ 0.54
Sdc1-205ENSMUST00000171158 Cyp3a57D3YYZ0 503 aa18.39■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Igflr1Q3U4N7 345 aa18.39■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Tmem67Q8BR76 992 aa18.39■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Akap11E9Q777 1895 aa18.39■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Kdm3aQ6PCM1 1323 aa18.39■□□□□ 0.53
Sdc1-205ENSMUST00000171158 FosbP13346 338 aa18.39■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Smg7Q5RJH6 1138 aaKnown RBP18.39■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Carmil3Q3UFQ8 1375 aa18.38■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Cfap58B2RW38 873 aa18.38■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Cspp1B2RX88 1205 aa18.38■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Adam1aQ60813 791 aa18.38■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Polr3gQ6NXY9 223 aa18.38■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Plcd3Q8K2J0 785 aa18.38■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Rufy2Q8R4C2 606 aa18.38■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Rbm10Q99KG3 930 aaKnown RBP18.38■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Greb1lB9EJV3 1913 aa18.38■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Ftl2P49945 183 aa18.38■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Nol10Q5RJG1 687 aaKnown RBP18.38■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Fsd1Q7TPM6 496 aa18.38■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Kcnf1Q7TSH7 493 aa18.38■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Shisa4Q8CA71 197 aa18.38■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Gigyf1Q99MR1 1044 aaKnown RBP18.38■□□□□ 0.53
Sdc1-205ENSMUST00000171158 Sh3bgrQ9WUZ7 214 aa18.38■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms