RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Lmbr1lQ9D1E5 489 aa13.37□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Chaf1aQ9QWF0 911 aa13.37□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 AppP12023 770 aa13.36□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Kif2aP28740 705 aa13.36□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 XpcP51612 930 aa13.36□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Ripply1Q2WG77 201 aa13.36□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Ddx46Q569Z5 1032 aaKnown RBP13.36□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Dhx40Q6PE54 779 aaKnown RBP13.36□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Nxf7Q80SZ6 620 aaKnown RBP13.36□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Ulbp1Q8HWA3 334 aa13.36□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Mybbp1aQ7TPV4 1344 aaKnown RBP13.36□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Surf1P09925 306 aa13.36□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Vps54Q5SPW0 977 aa13.36□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Bmp2kQ91Z96 1138 aa13.36□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Trim66Q924W6 1242 aa13.36□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Odf2lQ9D478 642 aa13.36□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Ctr9Q62018 1173 aaKnown RBP13.35□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Tmx4Q8C0L0 335 aa13.35□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Ccer1Q9CQL2 403 aa13.35□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 R3hcc1Q8BSI6 488 aa13.35□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 SnrkQ8VDU5 748 aa13.35□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Hps3Q91VB4 1002 aa13.35□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 StrbpQ91WM1 672 aaKnown RBP13.35□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Prl7a2O54831 253 aa13.34□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Camta1A2A891 1682 aa13.34□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 CtcfQ61164 736 aaKnown RBP13.34□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Ehd2Q8BH64 543 aa13.34□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Lmbrd2Q8C561 694 aa13.34□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Lrrfip2Q91WK0 415 aa13.34□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Snw1Q9CSN1 536 aaKnown RBP13.34□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Dip2bQ3UH60 1574 aa13.34□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Chd2E9PZM4 1827 aaKnown RBP13.34□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Dnajc25A2ALW5 357 aa13.34□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Stx1aO35526 288 aa13.34□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Rtel1Q0VGM9 1203 aa13.34□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Nol10Q5RJG1 687 aaKnown RBP13.34□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Trerf1Q8BXJ2 1205 aa13.34□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Rbm33Q9CXK9 1231 aaKnown RBP13.34□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Magi2Q9WVQ1 1275 aa13.34□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Ess2O70279 479 aa13.33□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Nbr1P97432 988 aa13.33□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Q8BZJ8 459 aa13.33□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Ubxn4Q8VCH8 506 aa13.33□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Med1Q925J9 1575 aa13.33□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Clec11aO88200 328 aa13.33□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Grm8P47743 908 aa13.33□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Tpm1P58771 284 aa13.33□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Anp32eP97822 260 aaKnown RBP13.33□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 CoblQ5NBX1 1337 aaKnown RBP13.33□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Atg3Q9CPX6 314 aa13.33□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Xpo4Q9ESJ0 1151 aa13.33□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Zbtb12Q9Z150 459 aa13.33□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 NpeppsQ11011 920 aa13.32□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Adora1Q60612 326 aa13.32□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Ppp1r10Q80W00 888 aaKnown RBP13.32□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Wdr3Q8BHB4 942 aaKnown RBP13.32□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Mei4Q8BRM6 389 aa13.32□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Pes1Q9EQ61 584 aaKnown RBP13.32□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Rbbp8nlA2ABX0 614 aa13.32□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Gm10563F6WIE4 79 aa13.32□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Actn3O88990 900 aaKnown RBP13.32□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Pnpla2Q8BJ56 486 aa13.32□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Dnm3Q8BZ98 863 aa13.32□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Paf1Q8K2T8 535 aa13.32□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 GckrQ91X44 587 aa13.32□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Rai14Q9EP71 979 aaKnown RBP13.32□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 CemipQ8BI06 1361 aa13.32□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Ccdc112A0AUP1 442 aa13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 DbnlQ62418 436 aa13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 HomezQ80W88 542 aa13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Vps37dQ810I0 261 aa13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Q8C5K5 320 aa13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Ccdc158Q8CDI6 1109 aa13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Vps18Q8R307 973 aa13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Mrps25Q9D125 171 aaKnown RBP13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Paxbp1P58501 919 aa13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Mcm6P97311 821 aa13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Kmt5bQ3U8K7 883 aa13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Limch1Q3UH68 1057 aa13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Ltv1Q6NSQ7 470 aaKnown RBP13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Ccdc82Q6PG04 518 aa13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Fsd1Q7TPM6 496 aa13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Gpatch3Q8BIY1 525 aa13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Ubn2Q80WC1 1314 aa13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Pramel3A2AHA7 463 aa13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Gm7903A2AWL1 463 aa13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 AV320801A2AWL3 467 aa13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Ttll7A4Q9F0 912 aa13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Gm15023L7MUB4 467 aa13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Anks1aP59672 1150 aa13.31□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 CebpaP53566 359 aa13.3□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Irf9Q61179 399 aa13.3□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Ahnak2E9PYB0 1738 aaKnown RBP13.3□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Tnrc6bQ8BKI2 1810 aaKnown RBP13.3□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 AW822073A0A0N4SUK1 652 aa13.3□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 GpkowQ56A08 488 aa13.29□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Gsdma3Q5Y4Y6 464 aa13.29□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Ppm1eQ80TL0 749 aa13.29□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Slc39a6Q8C145 765 aa13.29□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Pms1Q8K119 917 aa13.29□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms