RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Q3UPC7 1272 aa15.41■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Nell2Q61220 819 aa15.41■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Nlrp9bQ66X22 1003 aa15.41■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Ptrh1Q8BW00 204 aa15.41■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Nkx1-1G3UXB3 402 aa15.4■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 LeprP48356 1162 aa15.4■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 GpkowQ56A08 488 aa15.4■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Ppp1r1bQ60829 194 aa15.4■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Mum1Q6DID5 682 aa15.4■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Klf15Q9EPW2 415 aa15.4■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Plagl1Q9JLQ4 704 aa15.4■□□□□ 0.06
Ccdc28b-202ENSMUST00000106035 Pou3f3P31361 497 aa15.39■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Gpr182P43142 395 aa15.39■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Csrnp1P59054 583 aa15.39■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Ccdc51Q3URS9 406 aa15.39■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Scaf8Q6DID3 1268 aa15.39■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Ppil2Q9D787 521 aa15.39■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Mrpl12Q9DB15 201 aaKnown RBP15.39■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Zcchc17Q9ESX4 241 aaKnown RBP15.39■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 InsrrQ9WTL4 1300 aa15.39■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Agtpbp1Q641K1 1218 aa15.38■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Tmem130Q6NXM3 419 aa15.38■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Ddx31Q6NZQ2 687 aaKnown RBP15.38■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Mtmr2Q9Z2D1 643 aa15.38■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Cxcl9P18340 126 aa15.37■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Znfx1Q8R151 1909 aaKnown RBP15.37■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Pcdh15Q99PJ1 1943 aa15.37■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Rbbp6P97868 1790 aaKnown RBP15.36■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 GabrdP22933 449 aa15.36■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Terf1P70371 421 aa15.36■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 VgfQ0VGU4 617 aa15.36■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 EspnlQ3UYR4 1005 aa15.36■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Aldh1l1Q8R0Y6 902 aa15.36■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Telo2Q9DC40 840 aaKnown RBP15.36■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Anxa1P10107 346 aaKnown RBP15.35■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Plbd2Q3TCN2 594 aa15.35■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Fstl1Q62356 306 aa15.35■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Znf18Q810A1 556 aa15.35■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Ndfip2Q91ZP6 311 aa15.35■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Sh3bp5lQ99LH9 392 aa15.35■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Osbpl5Q9ER64 874 aa15.35■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Polr2aP08775 1970 aaKnown RBP15.35■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Mageb2A2AHM0 380 aa15.34■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 D1Pas1P16381 660 aa15.34■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Cap1P40124 474 aa15.34■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Ftl2P49945 183 aa15.34■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Plekhf1Q3TB82 279 aa15.34■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Adora1Q60612 326 aa15.34■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Bms1Q6PGF5 1284 aaKnown RBP15.34■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Ofd1Q80Z25 1017 aa15.34■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Phf23Q8BSN5 401 aa15.34■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Fbxo3Q9DC63 480 aa15.34■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Sh3bp5Q9Z131 463 aa15.34■□□□□ 0.05
Ccdc28b-202ENSMUST00000106035 Prl3d3A0A0M6L0J6 224 aa15.33■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Brpf1B2RRD7 1212 aa15.33■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Kifc2O08672 792 aa15.33■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Oog3Q3UWY1 500 aa15.33■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Abhd15Q5F2F2 459 aa15.33■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Nup98Q6PFD9 1816 aaKnown RBP15.33■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Rhbdl3P58873 404 aa15.32■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Irf6P97431 467 aa15.32■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Sez6lQ6P1D5 963 aa15.32■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Trappc12Q8K2L8 797 aa15.32■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Ncoa5Q91W39 579 aaKnown RBP15.32■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Sytl4Q9R0Q1 673 aa15.32■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Usp34Q6ZQ93 3582 aa15.32■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 NrapQ80XB4 1728 aa15.31■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 AfdnQ9QZQ1 1820 aaKnown RBP15.31■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Tlr7P58681 1050 aa15.31■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Jarid2Q62315 1234 aa15.31■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Znf219Q6IQX8 726 aa15.31■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Fchsd1Q6PFY1 688 aa15.31■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 RubcnQ80U62 956 aa15.31■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Gtf2iQ9ESZ8 998 aaKnown RBP15.31■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Celf2Q9Z0H4 508 aaKnown RBP15.31■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Gm42688A0A0R3P9D1 673 aa15.3■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Ifi207E9Q3L4 978 aa15.3■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Pde8bE9Q4S1 865 aa15.3■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Pde4aO89084 844 aa15.3■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Casp1P29452 402 aa15.3■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Atp8a2P98200 1148 aa15.3■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Rbm27Q5SFM8 1060 aaKnown RBP15.3■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Large2Q5XPT3 690 aa15.3■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Tgfb1i1Q62219 461 aa15.3■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 LdhdQ7TNG8 484 aa15.3■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Kbtbd13Q8C828 458 aa15.3■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Ccdc142Q8CAI1 738 aa15.3■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Shtn1Q8K2Q9 631 aa15.3■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Polr3dQ91WD1 398 aa15.3■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Hdac9Q99N13 588 aa15.3■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Chmp3Q9CQ10 224 aa15.3■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 ParvgQ9ERD8 331 aa15.3■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Cfap44E9Q5M6 1843 aa15.29■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Eya2O08575 532 aa15.29■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Wnt10bP48614 389 aa15.29■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Ankrd13cQ3UX43 541 aa15.29■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Slc10a5Q5PT54 434 aa15.29■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Foxn1Q61575 648 aa15.29■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Trmt44Q9D2Q2 713 aa15.29■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Tgm5Q9D7I9 724 aa15.29■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms