RNA–Protein interactions for RNA: ENSMUST00000085096.9

Ccdc88c-202, Transcript of Protein Daple, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ccdc88c, Length 6,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-202ENSMUST00000085096 Myo3aQ8K3H5 1613 aa17.11■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Zfyve16Q80U44 1528 aa17.11■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Syde2E9PUP1 1314 aa17.11■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Dnajc5P60904 198 aa17.11■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Atf7Q8R0S1 413 aa17.11■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Gnl2Q99LH1 728 aaKnown RBP17.11■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Atf5O70191 283 aa17.11■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Parp2O88554 559 aa17.11■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Jakmip3Q5DTN8 844 aa17.11■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Kiaa1024Q8K3V7 917 aa17.11■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Tmx1Q8VBT0 278 aa17.11■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Tpd52l2Q9CYZ2 220 aaKnown RBP17.11■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Cpsf1Q9EPU4 1441 aaKnown RBP17.1■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Csrnp1P59054 583 aa17.1■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Limch1Q3UH68 1057 aa17.1■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Gpcpd1Q8C0L9 675 aa17.1■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 SrrtQ99MR6 875 aaKnown RBP17.1■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Knl1Q66JQ7 1612 aa17.1■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Mx1P09922 631 aa17.1■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Atp2b4Q6Q477 1205 aa17.1■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Brinp3Q499E0 766 aa17.1■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Knop1Q9Z2Q2 478 aaKnown RBP17.09■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Znhit6Q3UFB2 460 aaKnown RBP17.09■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Nfil3O08750 462 aa17.09■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Wwc1Q5SXA9 1104 aa17.09■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Smarcc2Q6PDG5 1213 aa17.09■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Mrpl44Q9CY73 333 aaKnown RBP17.09■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Slx4ipQ9D7Y9 413 aa17.09■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Ttll7A4Q9F0 912 aa17.09■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Tubb6Q922F4 447 aa17.09■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Ftsj3Q9DBE9 838 aaKnown RBP17.09■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Kdm5aQ3UXZ9 1690 aa17.09■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Pdia3P27773 505 aaKnown RBP17.08■□□□□ 0.33
Ccdc88c-202ENSMUST00000085096 Plxnc1Q9QZC2 1574 aa17.08■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Tsr2Q8C8T8 191 aa17.08■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Bag4Q8CI61 457 aa17.08■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Scaf11E9PZM7 1456 aaKnown RBP17.08■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Vmn1r199Q8R280 367 aa17.08■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Ak2Q9WTP6 239 aa17.08■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Abca6Q8K441 1624 aa17.07■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Stat1P42225 749 aa17.07■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Islr2Q5RKR3 745 aa17.07■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Prune1Q8BIW1 454 aa17.07■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Cc2d1bQ8BRN9 848 aa17.07■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Mtmr7Q9Z2C9 660 aa17.07■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Rreb1Q3UH06 1700 aaKnown RBP17.07■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 1700018F24RikB2RW27 314 aa17.07■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Pls1Q3V0K9 630 aa17.07■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Bloc1s2Q9CWG9 143 aa17.07■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Dip2cE9PWR4 1557 aa17.07■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Luzp1Q8R4U7 1068 aaKnown RBP17.07■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Emilin1Q99K41 1017 aa17.07■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Kdm6aO70546 1401 aa17.07■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Olfr247E9PVJ7 320 aa17.07■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Olfr819K7N727 320 aa17.07■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Rnf17Q99MV7 1640 aa17.07■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Rasa1E9PYG6 1038 aa17.06■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Uba5Q8VE47 403 aa17.06■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Nap1l5Q9JJF0 156 aa17.06■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Ppp1r1bQ60829 194 aa17.06■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Zbtb1Q91VL9 713 aa17.06■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Glt1d1A4FUP9 346 aa17.06■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Prl3d2F6R3P9 224 aa17.06■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Bcl11aQ9QYE3 773 aa17.06■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Kiaa1551Q5DTW7 1521 aa17.06■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 A0A1W2P7S8 802 aa17.06■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Sun3Q5SS91 320 aa17.06■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Cdc5lQ6A068 802 aaKnown RBP17.06■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Acnat2Q8BGG9 420 aa17.06■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Cyp2c23E9Q5K4 494 aa17.05■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 GalcP54818 684 aa17.05■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 CenphQ9QYM8 241 aa17.05■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Chmp6P0C0A3 200 aa17.05■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Oxr1Q4KMM3 866 aa17.05■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Zbtb7aO88939 569 aaKnown RBP17.05■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 MaeaQ4VC33 396 aa17.05■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 OscarQ8VBT3 265 aa17.05■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Stxbp4Q9WV89 557 aa17.05■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Eya2O08575 532 aa17.04■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Tbc1d2bQ3U0J8 965 aa17.04■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Pus7B7ZNL8 666 aaKnown RBP17.04■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Akap2O54931 893 aa17.04■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Mctp2Q5RJH2 878 aa17.04■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Bms1Q6PGF5 1284 aaKnown RBP17.04■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Olfm5Q8BU90 496 aa17.04■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Klhl10Q9D5V2 608 aa17.04■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Stx6Q9JKK1 255 aa17.04■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Prl7a2O54831 253 aa17.04■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Copb2O55029 905 aa17.04■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Ift122Q6NWV3 1182 aa17.04■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Ddrgk1Q80WW9 315 aa17.04■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Dot1lQ6XZL8 1540 aa17.04■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 VrtnQ3SYK4 740 aa17.04■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Bst2Q8R2Q8 172 aa17.04■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 LyarQ08288 388 aaKnown RBP17.03■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Ankrd40Q5SUE8 363 aa17.03■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Tnnt2P50752 301 aa17.03■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Haus6Q6NV99 933 aaKnown RBP17.03■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Podxl2Q8CAE9 603 aa17.03■□□□□ 0.32
Ccdc88c-202ENSMUST00000085096 Trim11Q99PQ2 467 aa17.03■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms