RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Syt10Q9R0N4 523 aa18.74■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Atp6v0a2P15920 856 aa18.74■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Tbc1d5Q80XQ2 815 aa18.74■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Smarca5Q91ZW3 1051 aaKnown RBP18.74■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Svs3aF2Z472 265 aa18.74■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Ubxn1Q922Y1 297 aa18.74■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Tbc1d7Q9D0K0 293 aa18.74■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Dpf1Q9QX66 387 aa18.74■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Dennd3A2RT67 1274 aa18.74■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Cdr2P97817 455 aa18.74■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Cep128Q8BI22 1102 aa18.74■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Nsrp1Q5NCR9 542 aa18.74■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Tsga10Q6NY15 697 aa18.74■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Tspyl2Q7TQI8 677 aa18.74■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Letm1Q9Z2I0 738 aa18.74■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Fam114a2Q8VE88 497 aa18.73■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Tyro3P55144 880 aa18.73■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Pabpn1lQ5XFR0 273 aa18.73■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Zfp397Q7TNK4 527 aa18.73■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 CebpzP53569 1052 aaKnown RBP18.73■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Sec63Q8VHE0 760 aaKnown RBP18.73■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 AmfrQ9R049 643 aa18.73■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 EsrrbQ61539 433 aa18.73■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Tbc1d31Q6NXY1 996 aa18.73■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Eps15P42567 897 aa18.73■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Agbl1Q09M05 972 aa18.73■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Igbp1Q61249 340 aa18.72■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Kif17Q99PW8 1038 aa18.72■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Krt77Q6IFZ6 572 aa18.72■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Psmc4P54775 418 aa18.72■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Rrbp1Q99PL5 1605 aaKnown RBP18.72■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 CenppQ9CZ92 286 aa18.72■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Dnm1P39053 867 aa18.72■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Fam50bQ9WTJ8 334 aa18.72■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 IqceQ6PCQ0 778 aa18.72■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Atp2a1Q8R429 994 aa18.72■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 ParvgQ9ERD8 331 aa18.72■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Igf1rQ60751 1373 aa18.72■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Heatr4E9Q357 955 aa18.72■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Maip1Q8BHE8 291 aa18.72■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Gtpbp10Q8K013 366 aa18.72■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 WizO88286 1684 aaKnown RBP18.71■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Bcar3Q9QZK2 820 aa18.71■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Epb41l2O70318 988 aaKnown RBP18.71■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Vps16Q920Q4 839 aa18.71■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Gm1993A6X8I0 212 aa18.71■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 SlxD3Z347 212 aa18.71■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Myd88P22366 296 aa18.71■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Smarcc2Q6PDG5 1213 aa18.71■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Triml1Q8BVP1 470 aa18.71■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Cep83Q9D5R3 692 aa18.71■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Shroom2A2ALU4 1481 aa18.71■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Stim2P83093 746 aa18.71■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 DlatQ8BMF4 642 aa18.71■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Naip7Q9JIB3 1402 aa18.71■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Naip6Q9JIB6 1403 aa18.71■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 TrdnE9Q9K5 693 aa18.71■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Ccdc162pQ0VG85 912 aa18.71■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Ccdc157Q5SPX1 718 aa18.71■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Tex2Q6ZPJ0 1128 aaKnown RBP18.71■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Nop56Q9D6Z1 580 aaKnown RBP18.71■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Sept14Q9DA97 430 aa18.71■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Gjc1P28229 396 aa18.71■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 TchpQ3TVW5 497 aa18.71■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Cavin2Q63918 418 aaKnown RBP18.71■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Armc9Q9D2I5 817 aa18.71■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 L3mbtl2P59178 703 aa18.7■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Ints8Q80V86 995 aa18.7■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Usp11Q99K46 921 aa18.7■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 JmyQ9QXM1 983 aa18.7■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Rpl13P47963 211 aaKnown RBP18.7■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Fsip1Q9D3V5 435 aa18.7■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Q3UJC8 639 aa18.7■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Asic1Q6NXK8 526 aa18.7■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Ccdc14Q8K2J4 934 aa18.7■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Mcur1Q9CXD6 340 aa18.7■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Unc13aQ4KUS2 1712 aa18.7■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Eif2ak4Q9QZ05 1648 aa18.7■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Gna11P21278 359 aa18.7■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Zhx1P70121 873 aa18.7■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Ccdc124Q9D8X2 217 aaKnown RBP18.7■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Riok3Q9DBU3 519 aaKnown RBP18.7■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 LifrP42703 1092 aa18.7■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 PrphP15331 475 aa18.69■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Sptlc2P97363 560 aaKnown RBP18.69■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Map3k2Q61083 619 aa18.69■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Adcy3Q8VHH7 1145 aa18.69■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Stx8O88983 236 aa18.69■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Taok1Q5F2E8 1001 aa18.69■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Ccdc57Q6PHN1 1016 aa18.69■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Kifap3P70188 793 aa18.69■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Cyp7a1Q64505 503 aa18.69■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Slf2Q6P9P0 1278 aa18.69■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 RpgrQ9R0X5 1001 aa18.69■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Mterf4Q8BVN4 346 aa18.69■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Plxnc1Q9QZC2 1574 aa18.69■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Gm10093D3YYI8 482 aa18.69■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Hdac1O09106 482 aaKnown RBP18.69■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 U2af1l4Q8BGJ9 220 aa18.69■□□□□ 0.58
Ccdc88a-201ENSMUST00000040182 Speer3W4VSP1 261 aa18.68■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 84.9 ms