RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 CbarpQ66L44 698 aa14.19□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Q8C5K5 320 aa14.19□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Ppp1r42Q8R1Z4 357 aa14.19□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 PdgfdQ925I7 370 aa14.19□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Sytl4Q9R0Q1 673 aa14.19□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Carmil3Q3UFQ8 1375 aa14.19□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Glt1d1A4FUP9 346 aa14.18□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Tm6sf1P58749 370 aa14.18□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Plbd2Q3TCN2 594 aa14.18□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Tmem87bQ8BKU8 555 aa14.18□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Dis3l2Q8CI75 870 aaKnown RBP14.18□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Rrs1Q9CYH6 365 aaKnown RBP14.18□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Tpx2A2APB8 745 aaKnown RBP14.17□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Pde8bE9Q4S1 865 aa14.17□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Srgap3Q812A2 1099 aa14.17□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Edc3Q8K2D3 508 aaKnown RBP14.17□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Ciao1Q99KN2 339 aa14.17□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Brpf1B2RRD7 1212 aa14.16□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Psmd14O35593 310 aa14.16□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Mex3cQ05A36 652 aaKnown RBP14.16□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Gtpbp6Q3U6U5 514 aa14.16□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Tmc2Q8R4P4 888 aa14.16□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Zdbf2Q5SS00 2493 aaKnown RBP14.16□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 GabreA2AMW3 916 aa14.15□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Usp17lbE9Q9U0 468 aa14.15□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Eif6O55135 245 aa14.15□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 PgfP49764 158 aa14.15□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Csrnp1P59054 583 aa14.15□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Atp8a2P98200 1148 aa14.15□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Ddx46Q569Z5 1032 aaKnown RBP14.15□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Scaf8Q6DID3 1268 aa14.15□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Fchsd1Q6PFY1 688 aa14.15□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Ccdc93Q7TQK5 629 aa14.15□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Ptrh1Q8BW00 204 aa14.15□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Tor1aip2Q8BYU6 502 aa14.15□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Klf15Q9EPW2 415 aa14.15□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Mtmr2Q9Z2D1 643 aa14.15□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Duxf3A0A0N4SV92 674 aa14.14□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 GmpsQ3THK7 693 aa14.14□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Tom1l2Q5SRX1 507 aa14.14□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Pdzrn3Q69ZS0 1063 aa14.14□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Slc44a4Q91VA1 707 aa14.14□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Fam84aQ9D650 292 aa14.14□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 EvplQ9D952 2035 aa14.14□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Rbm27Q5SFM8 1060 aaKnown RBP14.13□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Nell2Q61220 819 aa14.13□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Mxd3Q80US8 206 aa14.13□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Fam13aQ8BGI4 693 aa14.13□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 WdpcpQ8C456 722 aa14.13□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 4930504O13RikQ8C5Z9 145 aa14.13□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Plcd4Q8K3R3 807 aa14.13□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Zbtb3Q91X45 518 aa14.13□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 ParvgQ9ERD8 331 aa14.13□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Col1a1P11087 1453 aa14.12□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Timm10P62073 90 aa14.12□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Terf1P70371 421 aa14.12□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Sptlc3Q8BG54 563 aa14.12□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Mrpl12Q9DB15 201 aaKnown RBP14.12□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Ccne2Q9Z238 404 aa14.12□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Pappa2E9PZ87 1789 aa14.11□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Phrf1A6H619 1682 aa14.11□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Ankrd63A2ARS0 390 aa14.11□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Slc4a9E9PUP3 929 aa14.11□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Gm4340L7N2C4 268 aa14.11□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Kifc2O08672 792 aa14.11□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Mmp8O70138 465 aa14.11□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Gm2163Q6PCY5 473 aa14.11□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Sept9Q80UG5 583 aa14.11□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Fam102bQ8BQS4 339 aa14.11□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Ufl1Q8CCJ3 793 aaKnown RBP14.11□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Fbxo3Q9DC63 480 aa14.11□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Nphp3Q7TNH6 1325 aa14.11□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Sept1P42209 366 aa14.1□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Atp2b3Q0VF55 1220 aa14.1□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 EspnlQ3UYR4 1005 aa14.1□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Shtn1Q8K2Q9 631 aa14.1□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Gtf2iQ9ESZ8 998 aaKnown RBP14.1□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Irs4Q9Z0Y7 1216 aa14.1□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Abcc4E9Q236 1325 aa14.1□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 NynrinQ5DTZ0 1840 aa14.09□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Speer4dL7N216 212 aa14.09□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Nlrp1aQ2LKU9 1182 aa14.09□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 NfkbibQ60778 359 aa14.09□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Ppp4r3aQ6P2K6 820 aa14.09□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Tmem67Q8BR76 992 aa14.09□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 Scn11aQ9R053 1765 aa14.09□□□□□ -0.15
Ccdc28b-201ENSMUST00000030586 SobpQ0P5V2 864 aa14.08□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Fam83bQ0VBM2 1012 aa14.08□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Ubxn2aQ99KJ0 258 aa14.08□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Upf1Q9EPU0 1124 aaKnown RBP14.08□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 UtrnE9Q6R7 3430 aa14.08□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Slc4a1P04919 929 aa14.07□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 D1Pas1P16381 660 aa14.07□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Neurod6P48986 337 aa14.07□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Gm5592Q3V0A6 857 aa14.07□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 DaglaQ6WQJ1 1044 aa14.07□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Sart3Q9JLI8 962 aaKnown RBP14.07□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Nphp1Q9QY53 687 aa14.07□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Tnip1Q9WUU8 647 aa14.07□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Znfx1Q8R151 1909 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms