RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Krt79Q8VED5 531 aa11.51□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Lrsam1Q80ZI6 727 aa11.51□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Rdm1Q9CQK3 281 aa11.51□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Igf1rQ60751 1373 aa11.5□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Mtx1P47802 317 aa11.5□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Acot9Q9R0X4 439 aaKnown RBP11.5□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Soga3Q6NZL0 945 aa11.5□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Ppp4r3aQ6P2K6 820 aa11.5□□□□□ -0.57
Ubr1-201ENSMUST00000028728 MycbpQ9EQS3 103 aa11.5□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Gm21663A0A0G2JE01 267 aa11.5□□□□□ -0.57
Ubr1-201ENSMUST00000028728 5031410I06RikE9Q4E0 267 aa11.5□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Gm5862K7N5V5 267 aa11.5□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Gm10220K7N660 267 aa11.5□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Senp1P59110 640 aa11.5□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Ankle2Q6P1H6 964 aa11.5□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Etf1Q8BWY3 437 aaKnown RBP11.5□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Olr1Q9EQ09 363 aa11.5□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Sept3Q9Z1S5 350 aa11.5□□□□□ -0.57
Ubr1-201ENSMUST00000028728 AI481877A2ALV5 1481 aa11.5□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Map3k2Q61083 619 aa11.5□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Zscan22Q8BGS5 496 aa11.5□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Cdan1Q8CC12 1239 aa11.5□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Leo1Q5XJE5 667 aa11.49□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Tceanc2Q8R2M0 207 aa11.49□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Exoc1Q8R3S6 894 aa11.49□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Atf3Q60765 181 aa11.49□□□□□ -0.57
Ubr1-201ENSMUST00000028728 MmeQ61391 750 aa11.49□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Prpf40aQ9R1C7 953 aaKnown RBP11.49□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Nfxl1E9Q8I7 918 aaKnown RBP11.49□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Kif5cP28738 956 aaKnown RBP11.49□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Gm28047Q3US59 414 aa11.49□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Gpatch8A2A6A1 1505 aa11.49□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Mmp8O70138 465 aa11.49□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Ift122Q6NWV3 1182 aa11.49□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Ccdc82Q6PG04 518 aa11.49□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Rassf10Q8BL43 508 aa11.49□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Frat2Q8K025 231 aa11.49□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Kiaa1524Q8BWY9 907 aa11.49□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Lonp2Q9DBN5 852 aa11.49□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Igbp1Q61249 340 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Fam160b2Q80YR2 744 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Wdr3Q8BHB4 942 aaKnown RBP11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Rps6kb1Q8BSK8 525 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Zbtb43Q9DAI4 467 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Stk36Q69ZM6 1316 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Ccdc6D3YZP9 469 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Zfp42P22227 288 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Tm6sf1P58749 370 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 PsdQ5DTT2 1024 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Gle1Q8R322 699 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Vps36Q91XD6 386 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Peg3Q3URU2 1571 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Ltv1Q6NSQ7 470 aaKnown RBP11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Tbc1d5Q80XQ2 815 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Haus1Q8BHX1 278 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Antxr1Q9CZ52 562 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Ccdc91Q9D8L5 442 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Col4a3bpQ9EQG9 624 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Rapgef4Q9EQZ6 1011 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Nsd3Q6P2L6 1439 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Gm1993A6X8I0 212 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 SlxD3Z347 212 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Cetn1P41209 172 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Zap70P43404 618 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Cnpy2Q9QXT0 182 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 VimP20152 466 aaKnown RBP11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Krt15Q61414 452 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Taok3Q8BYC6 898 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 WtapQ9ER69 396 aa11.48□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Gm21698A0A087WQP8 267 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Map3k9Q3U1V8 1077 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Ift20Q61025 132 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 L1td1Q587J6 782 aaKnown RBP11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Cep19Q9CQA8 163 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Ccdc170D3YXL0 722 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Zfpm1O35615 995 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Fam83gQ5SWY7 812 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Traf3ip3Q8C0G2 513 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Krt222Q8CCX5 294 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Ctnnbl1Q9CWL8 563 aaKnown RBP11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Sept14Q9DA97 430 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 SyncQ9EPM5 470 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Homer1Q9Z2Y3 366 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Ier5O89113 308 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 ZfxP17012 799 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Tcp11l1Q8BTG3 509 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Efcab8Q8C9R9 203 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Ccdc38Q8CDN8 563 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Efhd1Q9D4J1 240 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Atp12aQ9Z1W8 1035 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Gm7347D3YYI9 267 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Fchsd1Q6PFY1 688 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Rimbp2Q80U40 1072 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Bicd1Q8BR07 835 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Nlrp3Q8R4B8 1033 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Tacc2Q9JJG0 1149 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Tbc1d4Q8BYJ6 1307 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Capza3P70190 299 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Morc2aQ69ZX6 1030 aa11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Pym1Q8CHP5 203 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 46.1 ms