RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Ell2Q3UKU1 639 aa13.81□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Rbm19Q8R3C6 952 aaKnown RBP13.81□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Klf15Q9EPW2 415 aa13.81□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Crybg2B7ZCC2 1516 aa13.81□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 DesP31001 469 aaKnown RBP13.81□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Igbp1Q61249 340 aa13.81□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Vps37dQ810I0 261 aa13.81□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Nop56Q9D6Z1 580 aaKnown RBP13.81□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Krt90E9Q1Z0 538 aa13.81□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Serpinc1P32261 465 aa13.81□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Nlrp4cQ3TKR3 982 aa13.81□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Zbtb16Q3UQ17 673 aa13.81□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 RilpQ5ND29 369 aa13.81□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Erich2E9Q1A6 463 aa13.8□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Cog7Q3UM29 770 aa13.8□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 VeztQ3ZK22 780 aa13.8□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Igf2bp2Q5SF07 592 aaKnown RBP13.8□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Golga1Q9CW79 758 aa13.8□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Sbno1Q689Z5 1390 aa13.8□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Rbm8a2A0A0N4SUH6 174 aa13.8□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Apol7aB2RT54 418 aa13.8□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Slc8a1P70414 970 aa13.8□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Rbm8aQ9CWZ3 174 aa13.8□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Pik3r4Q8VD65 1358 aa13.8□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Ankrd35E9Q9D8 996 aa13.8□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Kmt5bQ3U8K7 883 aa13.8□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Cep128Q8BI22 1102 aa13.8□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Nop2Q922K7 793 aaKnown RBP13.8□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Stag1Q9D3E6 1258 aa13.8□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 2310002L09RikQ9D7L5 217 aa13.8□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Sox13Q04891 613 aa13.8□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 GpkowQ56A08 488 aa13.8□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Osbpl1aQ91XL9 950 aa13.8□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Pde6cQ91ZQ1 861 aa13.8□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 JmyQ9QXM1 983 aa13.8□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Gm45015A0A140LII9 184 aa13.79□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Ppp1r7Q3UM45 361 aa13.79□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Ift20Q61025 132 aa13.79□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Trim27Q62158 513 aa13.79□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Atp12aQ9Z1W8 1035 aa13.79□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Pus7B7ZNL8 666 aaKnown RBP13.79□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Zcchc17Q9ESX4 241 aaKnown RBP13.79□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Art2aP17981 287 aa13.79□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 LifrP42703 1092 aa13.79□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Sept11Q8C1B7 431 aaKnown RBP13.79□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Stx17Q9D0I4 301 aa13.79□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Gm6583E9Q8Z1 469 aa13.79□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 IkbkgO88522 412 aa13.79□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Gsta4P24472 222 aa13.79□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Fkbp5Q64378 456 aa13.79□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Rnf168Q80XJ2 565 aa13.79□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Haus1Q8BHX1 278 aa13.79□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Olr1Q9EQ09 363 aa13.79□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Card6E9PWH2 1175 aa13.78□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 RpsaP14206 295 aaKnown RBP13.78□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Bach1P97302 739 aa13.78□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Vps52Q8C754 723 aaKnown RBP13.78□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Cfap57Q9D180 1249 aa13.78□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Btbd11Q6GQW0 1109 aa13.78□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 IqceQ6PCQ0 778 aa13.78□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Traf3ip3Q8C0G2 513 aa13.78□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 HscbQ8K3A0 234 aa13.78□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Pex19Q8VCI5 299 aa13.78□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Riok1Q922Q2 567 aa13.78□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Swap70Q6A028 585 aaKnown RBP13.78□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 EnahQ03173 802 aa13.78□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Caprin2Q05A80 1031 aaKnown RBP13.78□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Nol11Q8BJW5 723 aaKnown RBP13.78□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Krt71Q9R0H5 524 aa13.78□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Acot9Q9R0X4 439 aaKnown RBP13.78□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Rad50P70388 1312 aa13.78□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Rabgap1A2AWA9 1064 aa13.77□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Cd109Q8R422 1442 aa13.77□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Pdzrn3Q69ZS0 1063 aa13.77□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Gm21985Q6P6P5 1106 aa13.77□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Gtpbp10Q8K013 366 aa13.77□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Smarca2Q6DIC0 1577 aa13.77□□□□□ -0.2
Pcdhac1-201ENSMUST00000007584 Atp2a2O55143 1044 aaKnown RBP13.77□□□□□ -0.21
Pcdhac1-201ENSMUST00000007584 Clec11aO88200 328 aa13.77□□□□□ -0.21
Pcdhac1-201ENSMUST00000007584 Pde11aP0C1Q2 933 aa13.77□□□□□ -0.21
Pcdhac1-201ENSMUST00000007584 Becn2P0DM65 447 aa13.77□□□□□ -0.21
Pcdhac1-201ENSMUST00000007584 CalcaP70160 136 aa13.77□□□□□ -0.21
Pcdhac1-201ENSMUST00000007584 Tbc1d31Q6NXY1 996 aa13.77□□□□□ -0.21
Pcdhac1-201ENSMUST00000007584 Krit1Q6S5J6 736 aa13.77□□□□□ -0.21
Pcdhac1-201ENSMUST00000007584 Clec16aQ80U30 1036 aa13.77□□□□□ -0.21
Pcdhac1-201ENSMUST00000007584 Arhgef6Q8K4I3 771 aa13.77□□□□□ -0.21
Pcdhac1-201ENSMUST00000007584 Speer4dL7N216 212 aa13.77□□□□□ -0.21
Pcdhac1-201ENSMUST00000007584 Ercc5P35689 1170 aa13.77□□□□□ -0.21
Pcdhac1-201ENSMUST00000007584 Neurog2P70447 263 aa13.77□□□□□ -0.21
Pcdhac1-201ENSMUST00000007584 Traf3ip1Q149C2 625 aa13.77□□□□□ -0.21
Pcdhac1-201ENSMUST00000007584 SyncQ9EPM5 470 aa13.77□□□□□ -0.21
Pcdhac1-201ENSMUST00000007584 Elp1Q7TT37 1333 aaKnown RBP13.76□□□□□ -0.21
Pcdhac1-201ENSMUST00000007584 Dab2P98078 766 aa13.76□□□□□ -0.21
Pcdhac1-201ENSMUST00000007584 Stim2P83093 746 aa13.76□□□□□ -0.21
Pcdhac1-201ENSMUST00000007584 Nxf2Q4ZGD8 691 aa13.76□□□□□ -0.21
Pcdhac1-201ENSMUST00000007584 Ppp1r10Q80W00 888 aaKnown RBP13.76□□□□□ -0.21
Pcdhac1-201ENSMUST00000007584 Krt222Q8CCX5 294 aa13.76□□□□□ -0.21
Pcdhac1-201ENSMUST00000007584 Fam114a2Q8VE88 497 aa13.76□□□□□ -0.21
Pcdhac1-201ENSMUST00000007584 Nphp3Q7TNH6 1325 aa13.76□□□□□ -0.21
Pcdhac1-201ENSMUST00000007584 WrnO09053 1401 aa13.76□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 63.2 ms