RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Irx4Q9QY61 515 aa10.99□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Prl3d3A0A0M6L0J6 224 aa10.98□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Trim34bJ3QNR8 485 aa10.98□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Hap1O35668 628 aa10.98□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Cdc42bpgQ80UW5 1551 aa10.98□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Smc2Q8CG48 1191 aaKnown RBP10.98□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Trpm1Q2TV84 1622 aa10.98□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Anxa1P10107 346 aaKnown RBP10.98□□□□□ -0.65
Col6a1-201ENSMUST00000001147 NapbP28663 298 aa10.98□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Cdkl5Q3UTQ8 938 aa10.98□□□□□ -0.65
Col6a1-201ENSMUST00000001147 HellsQ60848 821 aa10.98□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Acnat2Q8BGG9 420 aa10.98□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Vps18Q8R307 973 aa10.98□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Topbp1Q6ZQF0 1515 aa10.98□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Col1a2Q01149 1372 aa10.98□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Metap2O08663 478 aaKnown RBP10.98□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Mtx1P47802 317 aa10.98□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Sptlc2P97363 560 aaKnown RBP10.98□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Prdm1Q60636 856 aa10.98□□□□□ -0.65
Col6a1-201ENSMUST00000001147 SdsQ8VBT2 327 aa10.98□□□□□ -0.65
Col6a1-201ENSMUST00000001147 BrapQ99MP8 591 aa10.98□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Iqca1Q9CUL5 857 aa10.98□□□□□ -0.65
Col6a1-201ENSMUST00000001147 SetQ9EQU5 289 aaKnown RBP10.98□□□□□ -0.65
Col6a1-201ENSMUST00000001147 1700113H08RikE9Q9Q5 327 aa10.97□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Gm29094F6Q785 221 aa10.97□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Nxf2Q4ZGD8 691 aa10.97□□□□□ -0.65
Col6a1-201ENSMUST00000001147 MthfsQ9D110 203 aa10.97□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Gemin5Q8BX17 1502 aaKnown RBP10.97□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Uri1Q3TLD5 531 aa10.97□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Znhit6Q3UFB2 460 aaKnown RBP10.97□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Ppp4r3aQ6P2K6 820 aa10.97□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Nxf7Q80SZ6 620 aaKnown RBP10.97□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Tmem131lQ3U3D7 1597 aa10.97□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Eva1cP58659 440 aa10.97□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Asic4Q7TNS7 539 aa10.97□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Tmem266Q8BZB3 538 aa10.97□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Fam84aQ9D650 292 aa10.97□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Cdca8Q8BHX3 289 aa10.96□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Nlrp3Q8R4B8 1033 aa10.96□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Vps16Q920Q4 839 aa10.96□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Osbpl5Q9ER64 874 aa10.96□□□□□ -0.65
Col6a1-201ENSMUST00000001147 RereQ80TZ9 1558 aa10.96□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Eef2kO08796 724 aa10.96□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Kcnj4P52189 445 aa10.96□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Myl10Q62082 202 aa10.96□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Spag5Q7TME2 1165 aa10.96□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Acot9Q9R0X4 439 aaKnown RBP10.96□□□□□ -0.65
Col6a1-201ENSMUST00000001147 A0A1L1SQF0 893 aa10.96□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Clec11aO88200 328 aa10.96□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Csrnp1P59054 583 aa10.96□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Atp2b3Q0VF55 1220 aa10.96□□□□□ -0.66
Col6a1-201ENSMUST00000001147 L1td1Q587J6 782 aaKnown RBP10.96□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Rad17Q6NXW6 688 aa10.96□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Rps6ka5Q8C050 863 aa10.96□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Slain2Q8CI08 581 aa10.96□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Fam213aQ9CYH2 218 aa10.96□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Ccdc39Q9D5Y1 937 aa10.96□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Wdr17E9Q271 1322 aa10.96□□□□□ -0.66
Col6a1-201ENSMUST00000001147 TnksQ6PFX9 1320 aa10.96□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Cdk12Q14AX6 1484 aaKnown RBP10.95□□□□□ -0.66
Col6a1-201ENSMUST00000001147 CtcfQ61164 736 aaKnown RBP10.95□□□□□ -0.66
Col6a1-201ENSMUST00000001147 CenpqQ9CPQ5 267 aa10.95□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Nip7Q9CXK8 180 aaKnown RBP10.95□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Add3Q9QYB5 706 aaKnown RBP10.95□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Zscan20B2KFW1 1030 aa10.95□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Jakmip2D3YXK0 820 aa10.95□□□□□ -0.66
Col6a1-201ENSMUST00000001147 NpeppsQ11011 920 aa10.95□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Ncbp1Q3UYV9 790 aaKnown RBP10.95□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Dnajc5gQ8C632 165 aa10.95□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Pnma3Q8JZW8 466 aa10.95□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Rdm1Q9CQK3 281 aa10.95□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Card6E9PWH2 1175 aa10.95□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Paxbp1P58501 919 aa10.95□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Fam193aQ8CGI1 1231 aaKnown RBP10.95□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Trim29Q8R2Q0 587 aa10.95□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Add2Q9QYB8 725 aa10.95□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Gcom1E9PZ54 550 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Eya2O08575 532 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Dapk3O54784 448 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 MyzapQ3UIJ9 466 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Ccnl1Q52KE7 532 aaKnown RBP10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Cyp7a1Q64505 503 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Kiaa0753Q6A000 959 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 DpydQ8CHR6 1025 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 StrbpQ91WM1 672 aaKnown RBP10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Pcdhb15Q91Y04 786 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Zbtb43Q9DAI4 467 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 CemipQ8BI06 1361 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Dnajc25A2ALW5 357 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Atp2b1G5E829 1220 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Cers3Q1A3B0 383 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Trim11Q99PQ2 467 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Col4a3bpQ9EQG9 624 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Syde2E9PUP1 1314 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 TrdnE9Q9K5 693 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Ankrd40Q5SUE8 363 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Zfp397Q7TNK4 527 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Dmrt2Q8BG36 561 aa10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Arid5bQ8BM75 1188 aaKnown RBP10.94□□□□□ -0.66
Col6a1-201ENSMUST00000001147 Trim34aQ99PP6 485 aa10.94□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms