RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 FNDC8Q8TC99 324 aa23.15■■□□□ 1.3
VEGFA-231ENST00000640499 PIGTQ969N2 578 aa23.15■■□□□ 1.3
VEGFA-231ENST00000640499 GTPBP3Q969Y2 492 aaKnown RBP23.15■■□□□ 1.3
VEGFA-231ENST00000640499 ERMAPQ96PL5 475 aaPredicted RBP23.15■■□□□ 1.3
VEGFA-231ENST00000640499 NIPSNAP1Q9BPW8 284 aa23.15■■□□□ 1.3
VEGFA-231ENST00000640499 NDEL1Q9GZM8 345 aa23.15■■□□□ 1.3
VEGFA-231ENST00000640499 MOV10Q9HCE1 1003 aaKnown RBP23.15■■□□□ 1.3
VEGFA-231ENST00000640499 IL20Q9NYY1 176 aa23.15■■□□□ 1.3
VEGFA-231ENST00000640499 ATP23Q9Y6H3 246 aa23.15■■□□□ 1.3
VEGFA-231ENST00000640499 CDH10Q9Y6N8 788 aa23.15■■□□□ 1.3
VEGFA-231ENST00000640499 IGHV2OR16-5A0A0B4J2B6 119 aa23.14■■□□□ 1.29
VEGFA-231ENST00000640499 OVOL3O00110 214 aa23.14■■□□□ 1.29
VEGFA-231ENST00000640499 AHCYL1O43865 530 aa23.14■■□□□ 1.29
VEGFA-231ENST00000640499 UBL3O95164 117 aa23.14■■□□□ 1.29
VEGFA-231ENST00000640499 HOXB6P17509 224 aaKnown RBP23.14■■□□□ 1.29
VEGFA-231ENST00000640499 SLC6A6P31641 620 aa23.14■■□□□ 1.29
VEGFA-231ENST00000640499 RPS6KA3P51812 740 aa23.14■■□□□ 1.29
VEGFA-231ENST00000640499 RAB39AQ14964 217 aa23.14■■□□□ 1.29
VEGFA-231ENST00000640499 RASSF6Q6ZTQ3 369 aa23.14■■□□□ 1.29
VEGFA-231ENST00000640499 LRRC18Q8N456 261 aa23.14■■□□□ 1.29
VEGFA-231ENST00000640499 FBXO17Q96EF6 278 aa23.14■■□□□ 1.29
VEGFA-231ENST00000640499 FEVQ99581 238 aa23.14■■□□□ 1.29
VEGFA-231ENST00000640499 DHRS9Q9BPW9 319 aa23.14■■□□□ 1.29
VEGFA-231ENST00000640499 VPS13CQ709C8 3753 aa23.14■■□□□ 1.29
VEGFA-231ENST00000640499 USF3Q68DE3 2245 aa23.14■■□□□ 1.29
VEGFA-231ENST00000640499 RTTNQ86VV8 2226 aa23.13■■□□□ 1.29
VEGFA-231ENST00000640499 XKRYO14609 159 aa23.13■■□□□ 1.29
VEGFA-231ENST00000640499 TIPRLO75663 272 aa23.13■■□□□ 1.29
VEGFA-231ENST00000640499 ZNF35P13682 527 aa23.13■■□□□ 1.29
VEGFA-231ENST00000640499 GK3PQ14409 553 aa23.13■■□□□ 1.29
VEGFA-231ENST00000640499 SGCAQ16586 387 aa23.13■■□□□ 1.29
VEGFA-231ENST00000640499 ZNF362Q5T0B9 420 aaPredicted RBP23.13■■□□□ 1.29
VEGFA-231ENST00000640499 FAM27BQ5VT28 67 aa23.13■■□□□ 1.29
VEGFA-231ENST00000640499 CCDC121Q6ZUS5 278 aa23.13■■□□□ 1.29
VEGFA-231ENST00000640499 SLC16A14Q7RTX9 510 aa23.13■■□□□ 1.29
VEGFA-231ENST00000640499 DTX2Q86UW9 622 aa23.13■■□□□ 1.29
VEGFA-231ENST00000640499 GIPC3Q8TF64 312 aa23.13■■□□□ 1.29
VEGFA-231ENST00000640499 TRAF4Q9BUZ4 470 aaPredicted RBP23.13■■□□□ 1.29
VEGFA-231ENST00000640499 IFT27Q9BW83 186 aa23.13■■□□□ 1.29
VEGFA-231ENST00000640499 SYT4Q9H2B2 425 aa23.13■■□□□ 1.29
VEGFA-231ENST00000640499 DENND2DQ9H6A0 471 aaPredicted RBP23.13■■□□□ 1.29
VEGFA-231ENST00000640499 DNAJB9Q9UBS3 223 aa23.13■■□□□ 1.29
VEGFA-231ENST00000640499 DCTN6O00399 190 aa23.12■■□□□ 1.29
VEGFA-231ENST00000640499 BHLHE40O14503 412 aa23.12■■□□□ 1.29
VEGFA-231ENST00000640499 MGRN1O60291 552 aa23.12■■□□□ 1.29
VEGFA-231ENST00000640499 FARS2O95363 451 aaKnown RBP23.12■■□□□ 1.29
VEGFA-231ENST00000640499 CRYAAP02489 173 aa23.12■■□□□ 1.29
VEGFA-231ENST00000640499 NR2C1P13056 603 aa23.12■■□□□ 1.29
VEGFA-231ENST00000640499 HIST1H1CP16403 213 aaKnown RBP23.12■■□□□ 1.29
VEGFA-231ENST00000640499 NPR2P20594 1047 aa23.12■■□□□ 1.29
VEGFA-231ENST00000640499 TTKP33981 857 aa23.12■■□□□ 1.29
VEGFA-231ENST00000640499 CLEC12AQ5QGZ9 265 aa23.12■■□□□ 1.29
VEGFA-231ENST00000640499 C1orf146Q5VVC0 180 aa23.12■■□□□ 1.29
VEGFA-231ENST00000640499 UGT2A3Q6UWM9 527 aa23.12■■□□□ 1.29
VEGFA-231ENST00000640499 CD300LDQ6UXZ3 194 aa23.12■■□□□ 1.29
VEGFA-231ENST00000640499 SPNS3Q6ZMD2 512 aa23.12■■□□□ 1.29
VEGFA-231ENST00000640499 DEPDC4Q8N2C3 294 aa23.12■■□□□ 1.29
VEGFA-231ENST00000640499 NANOS1Q8WY41 292 aaKnown RBP23.12■■□□□ 1.29
VEGFA-231ENST00000640499 DUS3LQ96G46 650 aaKnown RBP23.12■■□□□ 1.29
VEGFA-231ENST00000640499 FOXN4Q96NZ1 517 aa23.12■■□□□ 1.29
VEGFA-231ENST00000640499 TSSK2Q96PF2 358 aa23.12■■□□□ 1.29
VEGFA-231ENST00000640499 DDOQ99489 341 aa23.12■■□□□ 1.29
VEGFA-231ENST00000640499 ZNF701Q9NV72 531 aaPredicted RBP23.12■■□□□ 1.29
VEGFA-231ENST00000640499 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.12■■□□□ 1.29
VEGFA-231ENST00000640499 REV1Q9UBZ9 1251 aa23.12■■□□□ 1.29
VEGFA-231ENST00000640499 POU2F3Q9UKI9 436 aa23.12■■□□□ 1.29
VEGFA-231ENST00000640499 ARID1AO14497 2285 aa23.12■■□□□ 1.29
VEGFA-231ENST00000640499 EBAG9O00559 213 aa23.11■■□□□ 1.29
VEGFA-231ENST00000640499 SERPINA5P05154 406 aa23.11■■□□□ 1.29
VEGFA-231ENST00000640499 PAX1P15863 534 aa23.11■■□□□ 1.29
VEGFA-231ENST00000640499 PRKACGP22612 351 aa23.11■■□□□ 1.29
VEGFA-231ENST00000640499 LAP3P28838 519 aa23.11■■□□□ 1.29
VEGFA-231ENST00000640499 ENDOGQ14249 297 aaKnown RBP23.11■■□□□ 1.29
VEGFA-231ENST00000640499 C11orf71Q6IPW1 123 aa23.11■■□□□ 1.29
VEGFA-231ENST00000640499 ADCK1Q86TW2 530 aa23.11■■□□□ 1.29
VEGFA-231ENST00000640499 OR4Q3Q8NH05 313 aa23.11■■□□□ 1.29
VEGFA-231ENST00000640499 OR4K13Q8NH42 304 aa23.11■■□□□ 1.29
VEGFA-231ENST00000640499 NMNAT3Q96T66 252 aa23.11■■□□□ 1.29
VEGFA-231ENST00000640499 NUAK2Q9H093 628 aa23.11■■□□□ 1.29
VEGFA-231ENST00000640499 POLE4Q9NR33 117 aa23.11■■□□□ 1.29
VEGFA-231ENST00000640499 PDP1Q9P0J1 537 aaPredicted RBP23.11■■□□□ 1.29
VEGFA-231ENST00000640499 ITPR3Q14573 2671 aa23.11■■□□□ 1.29
VEGFA-231ENST00000640499 ARRDC5A6NEK1 342 aa23.1■■□□□ 1.29
VEGFA-231ENST00000640499 GNGT2O14610 69 aa23.1■■□□□ 1.29
VEGFA-231ENST00000640499 SLC16A7O60669 478 aa23.1■■□□□ 1.29
VEGFA-231ENST00000640499 MST1LQ2TV78 715 aa23.1■■□□□ 1.29
VEGFA-231ENST00000640499 SLC35F1Q5T1Q4 408 aa23.1■■□□□ 1.29
VEGFA-231ENST00000640499 OTPQ5XKR4 325 aa23.1■■□□□ 1.29
VEGFA-231ENST00000640499 CPEB3Q8NE35 698 aaKnown RBP23.1■■□□□ 1.29
VEGFA-231ENST00000640499 TMEM171Q8WVE6 324 aa23.1■■□□□ 1.29
VEGFA-231ENST00000640499 HIVEP1P15822 2718 aa23.1■■□□□ 1.29
VEGFA-231ENST00000640499 A0A1W2PPL8 197 aa23.09■■□□□ 1.29
VEGFA-231ENST00000640499 OR6C68A6NDL8 312 aa23.09■■□□□ 1.29
VEGFA-231ENST00000640499 IDH3BO43837 385 aa23.09■■□□□ 1.29
VEGFA-231ENST00000640499 SMPD2O60906 423 aa23.09■■□□□ 1.29
VEGFA-231ENST00000640499 ENTPD5O75356 428 aa23.09■■□□□ 1.29
VEGFA-231ENST00000640499 MPZL1O95297 269 aa23.09■■□□□ 1.29
VEGFA-231ENST00000640499 SOX14O95416 240 aa23.09■■□□□ 1.29
VEGFA-231ENST00000640499 RAB36O95755 333 aa23.09■■□□□ 1.29
VEGFA-231ENST00000640499 ZNF32P17041 273 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms