RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 ZNRF4Q8WWF5 429 aa11.53□□□□□ -0.56
GTF3A-209ENST00000640289 PIK3IP1Q96FE7 263 aa11.53□□□□□ -0.56
GTF3A-209ENST00000640289 NOX3Q9HBY0 568 aa11.53□□□□□ -0.56
GTF3A-209ENST00000640289 KLHL21Q9UJP4 597 aa11.53□□□□□ -0.56
GTF3A-209ENST00000640289 B9D1Q9UPM9 204 aa11.53□□□□□ -0.56
GTF3A-209ENST00000640289 COL12A1Q99715 3063 aa11.53□□□□□ -0.56
GTF3A-209ENST00000640289 SPTBN1Q01082 2364 aaKnown RBP11.53□□□□□ -0.56
GTF3A-209ENST00000640289 ALPK2Q86TB3 2170 aa11.52□□□□□ -0.56
GTF3A-209ENST00000640289 IGLV1-36A0A0B4J1U3 117 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 FAM183AA6NL82 134 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 A6NNC1 897 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 RIIAD1A6NNX1 92 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 H0YHG0 523 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 M0R129 80 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 SURF4O15260 269 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 MPZL1O95297 269 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 WNT11O96014 354 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 OR8G3PP0DMU2 310 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 CD79AP11912 226 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 PRF1P14222 555 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 HOXB1P14653 301 aaPredicted RBP11.52□□□□□ -0.57
GTF3A-209ENST00000640289 LOXP28300 417 aaPredicted RBP11.52□□□□□ -0.57
GTF3A-209ENST00000640289 PEX2P28328 305 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 LAP3P28838 519 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 CRABP1P29762 137 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 CENPAP49450 140 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 ZNF83P51522 516 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 PIGFQ07326 219 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 ZIK1Q3SY52 487 aaPredicted RBP11.52□□□□□ -0.57
GTF3A-209ENST00000640289 FOXL2NBQ6ZUU3 175 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 MDP1Q86V88 176 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 PLPPR2Q96GM1 343 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 HCAR1Q9BXC0 346 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 GABARAPL3Q9BY60 117 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 DCLRE1BQ9H816 532 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 MED20Q9H944 212 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 SIAEQ9HAT2 523 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 EMC7Q9NPA0 242 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 POLE4Q9NR33 117 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 B3GNT2Q9NY97 397 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 TVP23BQ9NYZ1 205 aa11.52□□□□□ -0.57
GTF3A-209ENST00000640289 USP9YO00507 2555 aaPredicted RBP11.51□□□□□ -0.57
GTF3A-209ENST00000640289 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.51□□□□□ -0.57
GTF3A-209ENST00000640289 DPRXA6NFQ7 191 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 ZAR1LA6NP61 321 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 M0R1B8 84 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 RRP9O43818 475 aaKnown RBP11.51□□□□□ -0.57
GTF3A-209ENST00000640289 FARS2O95363 451 aaKnown RBP11.51□□□□□ -0.57
GTF3A-209ENST00000640289 IFNGP01579 166 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 HRGP04196 525 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 GYPBP06028 91 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 CELA3BP08861 270 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 CLUP10909 449 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 ZNF3P17036 446 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 NPR2P20594 1047 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 PYCR1P32322 319 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 TLE4Q04727 773 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 MEP1BQ16820 701 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 BEX5Q5H9J7 111 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 SLX4IPQ5VYV7 408 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 DNM1P34Q6PK57 102 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 UGT2A3Q6UWM9 527 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 SLC16A14Q7RTX9 510 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 ZBTB46Q86UZ6 589 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 MYPOPQ86VE0 399 aaPredicted RBP11.51□□□□□ -0.57
GTF3A-209ENST00000640289 OR51L1Q8NGJ5 315 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 HS3ST6Q96QI5 342 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 NMNAT2Q9BZQ4 307 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 RACGAP1Q9H0H5 632 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 OBP2BQ9NPH6 170 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 ENOPH1Q9UHY7 261 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 FKBP7Q9Y680 259 aa11.51□□□□□ -0.57
GTF3A-209ENST00000640289 A0A1W2PPR1 153 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 FAM221AA4D161 298 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 SNAP29O95721 258 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 HMGN1P05114 100 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 GAAP10253 952 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 CBR1P16152 277 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 SPI1P17947 270 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 MSR1P21757 451 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 GUCA1AP43080 201 aaPredicted RBP11.5□□□□□ -0.57
GTF3A-209ENST00000640289 PTDSS1P48651 473 aaKnown RBP11.5□□□□□ -0.57
GTF3A-209ENST00000640289 RAD23AP54725 363 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 RAB1AP62820 205 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 BSPH1Q075Z2 132 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 SPOCK1Q08629 439 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 ENDOGQ14249 297 aaKnown RBP11.5□□□□□ -0.57
GTF3A-209ENST00000640289 SNAPC1Q16533 368 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 GSG1Q2KHT4 349 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 NRN1LQ496H8 165 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 NCMAPQ5T1S8 102 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 FAM27BQ5VT28 67 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 C12orf73Q69YU5 71 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 PLBD1Q6P4A8 553 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 LYPD4Q6UWN0 246 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.5□□□□□ -0.57
GTF3A-209ENST00000640289 GLB1L2Q8IW92 636 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 CCDC36Q8IYA8 594 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 GALNT4Q8N4A0 578 aa11.5□□□□□ -0.57
GTF3A-209ENST00000640289 PROKR2Q8NFJ6 384 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms