RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 TOMM5Q8N4H5 51 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 OR6S1Q8NH40 331 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 AMELYQ99218 206 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 MRI1Q9BV20 369 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 BEX2Q9BXY8 128 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 SLCO1C1Q9NYB5 712 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 RABL2AQ9UBK7 228 aaPredicted RBP13.55□□□□□ -0.24
TRIM3-215ENST00000639856 ING1Q9UK53 422 aaPredicted RBP13.55□□□□□ -0.24
TRIM3-215ENST00000639856 TCFL5Q9UL49 500 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 RABL2BQ9UNT1 228 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 VDAC3Q9Y277 283 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 PCSK5Q92824 1860 aa13.55□□□□□ -0.24
TRIM3-215ENST00000639856 IGLV1-36A0A0B4J1U3 117 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 SHISA8B8ZZ34 492 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 ZNF593O00488 134 aaPredicted RBP13.54□□□□□ -0.24
TRIM3-215ENST00000639856 GSTZ1O43708 216 aaPredicted RBP13.54□□□□□ -0.24
TRIM3-215ENST00000639856 SLC16A7O60669 478 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 DPP4P27487 766 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 OTX2P32243 289 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 SOX2P48431 317 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 SF3B4Q15427 424 aaKnown RBP eCLIP13.54□□□□□ -0.24
TRIM3-215ENST00000639856 EXT1Q16394 746 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 PPP1R32Q7Z5V6 425 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 CDC6Q99741 560 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 DDA1Q9BW61 102 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 SPRY4Q9C004 299 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 METTL7AQ9H8H3 244 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 LIN7BQ9HAP6 207 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 CACNA1CQ13936 2221 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 NSG1A0A0A6YYJ2 146 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 SLC22A23A1A5C7 686 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 ZNF254O75437 659 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 RAF1P04049 648 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 ADRB1P08588 477 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 APOBEC1P41238 236 aaKnown RBP13.54□□□□□ -0.24
TRIM3-215ENST00000639856 RRAS2P62070 204 aaPredicted RBP13.54□□□□□ -0.24
TRIM3-215ENST00000639856 MRPS15P82914 257 aaKnown RBP13.54□□□□□ -0.24
TRIM3-215ENST00000639856 RASGEF1BQ0VAM2 473 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 HES3Q5TGS1 186 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 FDX2Q6P4F2 183 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 LRRC69Q6ZNQ3 347 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 TCTE3Q8IZS6 198 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 PRSS35Q8N3Z0 413 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 ZNF676Q8N7Q3 588 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 SMIM4Q8WVI0 70 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 ASB17Q8WXJ9 295 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 NXPE2Q96DL1 559 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 DCBLD2Q96PD2 775 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 OR8B4Q96RC9 309 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 MRPL22Q9NWU5 206 aaKnown RBP13.54□□□□□ -0.24
TRIM3-215ENST00000639856 PPP4R1LQ9P1A2 415 aa13.54□□□□□ -0.24
TRIM3-215ENST00000639856 MED12Q93074 2177 aa13.53□□□□□ -0.24
TRIM3-215ENST00000639856 CTLA4P16410 223 aa13.53□□□□□ -0.24
TRIM3-215ENST00000639856 ADRA2CP18825 462 aa13.53□□□□□ -0.24
TRIM3-215ENST00000639856 TCEA1P23193 301 aaKnown RBP13.53□□□□□ -0.24
TRIM3-215ENST00000639856 DLX5P56178 289 aa13.53□□□□□ -0.24
TRIM3-215ENST00000639856 MELKQ14680 651 aa13.53□□□□□ -0.24
TRIM3-215ENST00000639856 BCL2A1Q16548 175 aa13.53□□□□□ -0.24
TRIM3-215ENST00000639856 MEP1BQ16820 701 aa13.53□□□□□ -0.24
TRIM3-215ENST00000639856 RNASE12Q5GAN4 147 aaKnown RBP13.53□□□□□ -0.24
TRIM3-215ENST00000639856 PRAMEF20Q5VT98 475 aa13.53□□□□□ -0.24
TRIM3-215ENST00000639856 TIGD3Q6B0B8 471 aa13.53□□□□□ -0.24
TRIM3-215ENST00000639856 FCRLAQ7L513 359 aa13.53□□□□□ -0.24
TRIM3-215ENST00000639856 NDUFAF7Q7L592 441 aa13.53□□□□□ -0.24
TRIM3-215ENST00000639856 NOXA1Q86UR1 476 aa13.53□□□□□ -0.24
TRIM3-215ENST00000639856 SIAH3Q8IW03 269 aa13.53□□□□□ -0.24
TRIM3-215ENST00000639856 ZNF248Q8NDW4 579 aa13.53□□□□□ -0.24
TRIM3-215ENST00000639856 M1APQ8TC57 530 aa13.53□□□□□ -0.24
TRIM3-215ENST00000639856 GPR148Q8TDV2 347 aa13.53□□□□□ -0.24
TRIM3-215ENST00000639856 SLC25A38Q96DW6 304 aa13.53□□□□□ -0.24
TRIM3-215ENST00000639856 RNF170Q96K19 258 aa13.53□□□□□ -0.24
TRIM3-215ENST00000639856 C4orf45Q96LM5 186 aa13.53□□□□□ -0.24
TRIM3-215ENST00000639856 FOXN4Q96NZ1 517 aa13.53□□□□□ -0.24
TRIM3-215ENST00000639856 ZPBPQ9BS86 351 aa13.53□□□□□ -0.24
TRIM3-215ENST00000639856 WIF1Q9Y5W5 379 aa13.53□□□□□ -0.24
TRIM3-215ENST00000639856 CHCHD2Q9Y6H1 151 aaPredicted RBP13.53□□□□□ -0.24
TRIM3-215ENST00000639856 TRBV5-7A0A0A0MS05 114 aa13.52□□□□□ -0.24
TRIM3-215ENST00000639856 RGS13O14921 159 aa13.52□□□□□ -0.24
TRIM3-215ENST00000639856 CALCBP10092 127 aa13.52□□□□□ -0.24
TRIM3-215ENST00000639856 IL11P20809 199 aa13.52□□□□□ -0.24
TRIM3-215ENST00000639856 RAB25P57735 213 aa13.52□□□□□ -0.24
TRIM3-215ENST00000639856 PUDPQ08623 228 aa13.52□□□□□ -0.24
TRIM3-215ENST00000639856 ZP4Q12836 540 aa13.52□□□□□ -0.24
TRIM3-215ENST00000639856 FOXF1Q12946 379 aa13.52□□□□□ -0.24
TRIM3-215ENST00000639856 SLC17A1Q14916 467 aa13.52□□□□□ -0.24
TRIM3-215ENST00000639856 MFSD13AQ14CX5 517 aa13.52□□□□□ -0.24
TRIM3-215ENST00000639856 ETFDHQ16134 617 aa13.52□□□□□ -0.24
TRIM3-215ENST00000639856 OTPQ5XKR4 325 aa13.52□□□□□ -0.24
TRIM3-215ENST00000639856 SLC18B1Q6NT16 456 aa13.52□□□□□ -0.24
TRIM3-215ENST00000639856 LRRN1Q6UXK5 716 aa13.52□□□□□ -0.24
TRIM3-215ENST00000639856 SLC35D2Q76EJ3 337 aa13.52□□□□□ -0.24
TRIM3-215ENST00000639856 PRSS45Q7RTY3 260 aa13.52□□□□□ -0.24
TRIM3-215ENST00000639856 LRRTM1Q86UE6 522 aa13.52□□□□□ -0.24
TRIM3-215ENST00000639856 ZNF679Q8IYX0 411 aa13.52□□□□□ -0.24
TRIM3-215ENST00000639856 MFSD8Q8NHS3 518 aa13.52□□□□□ -0.24
TRIM3-215ENST00000639856 ARL5BQ96KC2 179 aa13.52□□□□□ -0.24
TRIM3-215ENST00000639856 DPAGT1Q9H3H5 408 aa13.52□□□□□ -0.24
TRIM3-215ENST00000639856 ELOVL3Q9HB03 270 aa13.52□□□□□ -0.24
TRIM3-215ENST00000639856 CCDC187A0A096LP49 1063 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms