RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 SRSF5Q13243 272 aaKnown RBP1.35□□□□□ -2.19
CCDC7-211ENST00000638889 PON2Q15165 354 aa1.35□□□□□ -2.19
CCDC7-211ENST00000638889 CDC37Q16543 378 aaPredicted RBP1.35□□□□□ -2.19
CCDC7-211ENST00000638889 GALNT17Q6IS24 598 aa1.35□□□□□ -2.19
CCDC7-211ENST00000638889 ZFP1Q6P2D0 407 aa1.35□□□□□ -2.19
CCDC7-211ENST00000638889 ARL9Q6T311 187 aa1.35□□□□□ -2.19
CCDC7-211ENST00000638889 TMEM205Q6UW68 189 aa1.35□□□□□ -2.19
CCDC7-211ENST00000638889 UNQ9165/PRO28630Q6UXU0 137 aa1.35□□□□□ -2.19
CCDC7-211ENST00000638889 ASCL5Q7RTU5 278 aa1.35□□□□□ -2.19
CCDC7-211ENST00000638889 OR2T3Q8NH03 318 aa1.35□□□□□ -2.19
CCDC7-211ENST00000638889 OR8U1Q8NH10 309 aa1.35□□□□□ -2.19
CCDC7-211ENST00000638889 LINC01560Q8TB33 94 aa1.35□□□□□ -2.19
CCDC7-211ENST00000638889 FAM3DQ96BQ1 224 aa1.35□□□□□ -2.19
CCDC7-211ENST00000638889 COQ2Q96H96 371 aa1.35□□□□□ -2.19
CCDC7-211ENST00000638889 HSFY1Q96LI6 401 aa1.35□□□□□ -2.19
CCDC7-211ENST00000638889 P2RX4Q99571 388 aa1.35□□□□□ -2.19
CCDC7-211ENST00000638889 TMEM59Q9BXS4 323 aa1.35□□□□□ -2.19
CCDC7-211ENST00000638889 FN3KRPQ9HA64 309 aa1.35□□□□□ -2.19
CCDC7-211ENST00000638889 CTSFQ9UBX1 484 aa1.35□□□□□ -2.19
CCDC7-211ENST00000638889 AHDC1Q5TGY3 1603 aaPredicted RBP1.35□□□□□ -2.19
CCDC7-211ENST00000638889 SHROOM3Q8TF72 1996 aa1.34□□□□□ -2.19
CCDC7-211ENST00000638889 C16orf90A8MZG2 172 aa1.34□□□□□ -2.19
CCDC7-211ENST00000638889 SPECC1L-ADORA2AF8WAN1 911 aa1.34□□□□□ -2.19
CCDC7-211ENST00000638889 K7EQM0 130 aa1.34□□□□□ -2.19
CCDC7-211ENST00000638889 CHST1O43916 411 aa1.34□□□□□ -2.19
CCDC7-211ENST00000638889 CLDN9O95484 217 aa1.34□□□□□ -2.19
CCDC7-211ENST00000638889 CD74P04233 296 aa1.34□□□□□ -2.19
CCDC7-211ENST00000638889 HSPA5P11021 654 aaKnown RBP1.34□□□□□ -2.19
CCDC7-211ENST00000638889 CD1CP29017 333 aa1.34□□□□□ -2.19
CCDC7-211ENST00000638889 VHLP40337 213 aa1.34□□□□□ -2.19
CCDC7-211ENST00000638889 ACAA2P42765 397 aaKnown RBP1.34□□□□□ -2.19
CCDC7-211ENST00000638889 CCT3P49368 545 aaKnown RBP1.34□□□□□ -2.19
CCDC7-211ENST00000638889 NUTF2P61970 127 aaKnown RBP1.34□□□□□ -2.19
CCDC7-211ENST00000638889 PIGHQ14442 188 aaPredicted RBP1.34□□□□□ -2.19
CCDC7-211ENST00000638889 ANKRD22Q5VYY1 191 aa1.34□□□□□ -2.19
CCDC7-211ENST00000638889 SPECC1LQ69YQ0 1117 aa1.34□□□□□ -2.19
CCDC7-211ENST00000638889 CALHM1Q8IU99 346 aa1.34□□□□□ -2.19
CCDC7-211ENST00000638889 HSD17B11Q8NBQ5 300 aa1.34□□□□□ -2.19
CCDC7-211ENST00000638889 OR4K5Q8NGD3 323 aa1.34□□□□□ -2.19
CCDC7-211ENST00000638889 CIRBP-AS1Q8TBR5 109 aa1.34□□□□□ -2.19
CCDC7-211ENST00000638889 SCFD1Q8WVM8 642 aa1.34□□□□□ -2.19
CCDC7-211ENST00000638889 ZNF607Q96SK3 696 aa1.34□□□□□ -2.19
CCDC7-211ENST00000638889 CNN2Q99439 309 aaKnown RBP1.34□□□□□ -2.19
CCDC7-211ENST00000638889 SH3GL1Q99961 368 aa1.34□□□□□ -2.19
CCDC7-211ENST00000638889 RMND5AQ9H871 391 aa1.34□□□□□ -2.19
CCDC7-211ENST00000638889 LIN28AQ9H9Z2 209 aaKnown RBP1.34□□□□□ -2.19
CCDC7-211ENST00000638889 PTBP2Q9UKA9 531 aaKnown RBP1.34□□□□□ -2.19
CCDC7-211ENST00000638889 MMACHCQ9Y4U1 282 aa1.34□□□□□ -2.19
CCDC7-211ENST00000638889 SHANK1Q9Y566 2161 aa1.34□□□□□ -2.2
CCDC7-211ENST00000638889 LTBP4Q8N2S1 1624 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 TRAV26-1A0A087WT03 109 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 IGKV2-24A0A0C4DH68 120 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 ANGPT2O15123 496 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 ERLIN2O94905 339 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 C1orf105O95561 183 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 UBTFL6P0CB48 400 aaPredicted RBP1.33□□□□□ -2.2
CCDC7-211ENST00000638889 MAS1LP35410 378 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 ZNF138P52744 262 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 FBXW4P57775 412 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 BPIFB3P59826 476 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 ELP6Q0PNE2 266 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 MRPL28Q13084 256 aaKnown RBP1.33□□□□□ -2.2
CCDC7-211ENST00000638889 SNRNP35Q16560 246 aaKnown RBP1.33□□□□□ -2.2
CCDC7-211ENST00000638889 ZSCAN26Q16670 478 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 PLET1Q6UQ28 207 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 OAFQ86UD1 273 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 PRSS58Q8IYP2 241 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 LRRC52Q8N7C0 313 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 TRPV1Q8NER1 839 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 LILRB4Q8NHJ6 448 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 C17orf50Q8WW18 174 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 THRSPQ92748 146 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 FLYWCH2Q96CP2 140 aaKnown RBP1.33□□□□□ -2.2
CCDC7-211ENST00000638889 C10orf35Q96D05 121 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 PANX2Q96RD6 677 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 COPS8Q99627 209 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 LHX5Q9H2C1 402 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 NMRAL1Q9HBL8 299 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 UVRAGQ9P2Y5 699 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 PCNX2A6NKB5 2137 aa1.33□□□□□ -2.2
CCDC7-211ENST00000638889 PEX11AO75192 247 aa1.32□□□□□ -2.2
CCDC7-211ENST00000638889 C2P06681 752 aa1.32□□□□□ -2.2
CCDC7-211ENST00000638889 CT62P0C5K7 136 aa1.32□□□□□ -2.2
CCDC7-211ENST00000638889 ZNF806P0C7X5 589 aa1.32□□□□□ -2.2
CCDC7-211ENST00000638889 CALM1P0DP23 149 aa1.32□□□□□ -2.2
CCDC7-211ENST00000638889 CALM2P0DP24 149 aa1.32□□□□□ -2.2
CCDC7-211ENST00000638889 CALM3P0DP25 149 aa1.32□□□□□ -2.2
CCDC7-211ENST00000638889 PSMA5P28066 241 aa1.32□□□□□ -2.2
CCDC7-211ENST00000638889 EPS15P42566 896 aa1.32□□□□□ -2.2
CCDC7-211ENST00000638889 CLINT1Q14677 625 aa1.32□□□□□ -2.2
CCDC7-211ENST00000638889 UQCC3Q6UW78 93 aa1.32□□□□□ -2.2
CCDC7-211ENST00000638889 FBXW12Q6X9E4 464 aa1.32□□□□□ -2.2
CCDC7-211ENST00000638889 ST20-AS1Q8NBB2 130 aa1.32□□□□□ -2.2
CCDC7-211ENST00000638889 FAM83FQ8NEG4 500 aaPredicted RBP1.32□□□□□ -2.2
CCDC7-211ENST00000638889 PIK3IP1Q96FE7 263 aa1.32□□□□□ -2.2
CCDC7-211ENST00000638889 C16orf45Q96MC5 204 aaPredicted RBP1.32□□□□□ -2.2
CCDC7-211ENST00000638889 RPRD1AQ96P16 312 aaPredicted RBP1.32□□□□□ -2.2
CCDC7-211ENST00000638889 FBXO6Q9NRD1 293 aaPredicted RBP1.32□□□□□ -2.2
CCDC7-211ENST00000638889 FAM49BQ9NUQ9 324 aa1.32□□□□□ -2.2
CCDC7-211ENST00000638889 KLHL28Q9NXS3 571 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms