RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 LRRC58Q96CX6 371 aa14.38□□□□□ -0.11
SMN2-216ENST00000638794 NMD3Q96D46 503 aaKnown RBP14.38□□□□□ -0.11
SMN2-216ENST00000638794 ECSITQ9BQ95 431 aa14.38□□□□□ -0.11
SMN2-216ENST00000638794 POLR2J2Q9GZM3 115 aaKnown RBP14.38□□□□□ -0.11
SMN2-216ENST00000638794 POLR2J3Q9H1A7 115 aaKnown RBP14.38□□□□□ -0.11
SMN2-216ENST00000638794 SIAEQ9HAT2 523 aa14.38□□□□□ -0.11
SMN2-216ENST00000638794 BAG5Q9UL15 447 aa14.38□□□□□ -0.11
SMN2-216ENST00000638794 UGT2A1Q9Y4X1 527 aa14.38□□□□□ -0.11
SMN2-216ENST00000638794 IGKV1D-43A0A0B4J1Z2 117 aa14.37□□□□□ -0.11
SMN2-216ENST00000638794 VENTXO95231 258 aa14.37□□□□□ -0.11
SMN2-216ENST00000638794 CCNOP22674 350 aa14.37□□□□□ -0.11
SMN2-216ENST00000638794 CRYBB2P43320 205 aa14.37□□□□□ -0.11
SMN2-216ENST00000638794 OR1E2P47887 323 aa14.37□□□□□ -0.11
SMN2-216ENST00000638794 MRPS34P82930 218 aaKnown RBP14.37□□□□□ -0.11
SMN2-216ENST00000638794 MVKQ03426 396 aa14.37□□□□□ -0.11
SMN2-216ENST00000638794 FMODQ06828 376 aa14.37□□□□□ -0.11
SMN2-216ENST00000638794 MMEL1Q495T6 779 aa14.37□□□□□ -0.11
SMN2-216ENST00000638794 SHQ1Q6PI26 577 aaKnown RBP14.37□□□□□ -0.11
SMN2-216ENST00000638794 OR1J1Q8NGS3 322 aa14.37□□□□□ -0.11
SMN2-216ENST00000638794 LIPHQ8WWY8 451 aa14.37□□□□□ -0.11
SMN2-216ENST00000638794 HDAC2Q92769 488 aaKnown RBP14.37□□□□□ -0.11
SMN2-216ENST00000638794 NABP1Q96AH0 204 aa14.37□□□□□ -0.11
SMN2-216ENST00000638794 SH3GL1Q99961 368 aa14.37□□□□□ -0.11
SMN2-216ENST00000638794 NKIRAS2Q9NYR9 191 aa14.37□□□□□ -0.11
SMN2-216ENST00000638794 TRAV20A0A0B4J274 112 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 IGHV1-69-2A0A0G2JMI3 117 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 MGRN1O60291 552 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 PIP5K1CO60331 668 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 IGHV3-13P01766 116 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 ZNF32P17041 273 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 DRD4P21917 467 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 STOMP27105 288 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 LAPTM4AQ15012 233 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 TSTQ16762 297 aaKnown RBP14.36□□□□□ -0.11
SMN2-216ENST00000638794 FAHD2BQ6P2I3 314 aaPredicted RBP14.36□□□□□ -0.11
SMN2-216ENST00000638794 THSD4Q6ZMP0 1018 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 USP51Q70EK9 711 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 ZNF101Q8IZC7 436 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 SEMA6DQ8NFY4 1073 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 NSMAFQ92636 917 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 FAHD2AQ96GK7 314 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 ZNF583Q96ND8 569 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 TMEM120AQ9BXJ8 343 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 KCNN2Q9H2S1 579 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 ZNF665Q9H7R5 613 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 SMURF2Q9HAU4 748 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 CCNB1IP1Q9NPC3 277 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 DECR2Q9NUI1 292 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 STX18Q9P2W9 335 aaKnown RBP14.36□□□□□ -0.11
SMN2-216ENST00000638794 MED31Q9Y3C7 131 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 CACNG2Q9Y698 323 aa14.36□□□□□ -0.11
SMN2-216ENST00000638794 A0A0A6YYJ9 748 aa14.35□□□□□ -0.11
SMN2-216ENST00000638794 NPIPB13A6NJU9 1138 aa14.35□□□□□ -0.11
SMN2-216ENST00000638794 NPIPB4C9JG80 1138 aa14.35□□□□□ -0.11
SMN2-216ENST00000638794 TPD52L2O43399 206 aaKnown RBP14.35□□□□□ -0.11
SMN2-216ENST00000638794 PNPP00491 289 aa14.35□□□□□ -0.11
SMN2-216ENST00000638794 MT-ND5P03915 603 aa14.35□□□□□ -0.11
SMN2-216ENST00000638794 THRBP10828 461 aa14.35□□□□□ -0.11
SMN2-216ENST00000638794 WNT5AP41221 380 aa14.35□□□□□ -0.11
SMN2-216ENST00000638794 TEKQ02763 1124 aa14.35□□□□□ -0.11
SMN2-216ENST00000638794 CD47Q08722 323 aa14.35□□□□□ -0.11
SMN2-216ENST00000638794 TOP3AQ13472 1001 aaPredicted RBP14.35□□□□□ -0.11
SMN2-216ENST00000638794 SGCAQ16586 387 aa14.35□□□□□ -0.11
SMN2-216ENST00000638794 MOGQ16653 247 aa14.35□□□□□ -0.11
SMN2-216ENST00000638794 LRRC23Q53EV4 343 aaPredicted RBP14.35□□□□□ -0.11
SMN2-216ENST00000638794 COQ5Q5HYK3 327 aa14.35□□□□□ -0.11
SMN2-216ENST00000638794 TMEM255AQ5JRV8 349 aa14.35□□□□□ -0.11
SMN2-216ENST00000638794 SPATA46Q5T0L3 261 aa14.35□□□□□ -0.11
SMN2-216ENST00000638794 ERICH5Q6P6B1 374 aa14.35□□□□□ -0.11
SMN2-216ENST00000638794 C1orf229Q6ZS94 237 aaPredicted RBP14.35□□□□□ -0.11
SMN2-216ENST00000638794 AKR7LQ8NHP1 331 aa14.35□□□□□ -0.11
SMN2-216ENST00000638794 C10orf82Q8WW14 230 aa14.35□□□□□ -0.11
SMN2-216ENST00000638794 IPCEF1Q8WWN9 437 aaPredicted RBP14.35□□□□□ -0.11
SMN2-216ENST00000638794 POM121L2Q96KW2 1035 aa14.35□□□□□ -0.11
SMN2-216ENST00000638794 TXNIPQ9H3M7 391 aa14.35□□□□□ -0.11
SMN2-216ENST00000638794 SAP30LQ9HAJ7 183 aa14.35□□□□□ -0.11
SMN2-216ENST00000638794 G6PC2Q9NQR9 355 aa14.35□□□□□ -0.11
SMN2-216ENST00000638794 HIF3AQ9Y2N7 669 aa14.35□□□□□ -0.11
SMN2-216ENST00000638794 TANC2Q9HCD6 1990 aa14.34□□□□□ -0.11
SMN2-216ENST00000638794 LOC100509620A0A075B734 347 aa14.34□□□□□ -0.11
SMN2-216ENST00000638794 C5orf49A4QMS7 147 aa14.34□□□□□ -0.11
SMN2-216ENST00000638794 CLDN25C9JDP6 229 aa14.34□□□□□ -0.11
SMN2-216ENST00000638794 MRASO14807 208 aa14.34□□□□□ -0.11
SMN2-216ENST00000638794 DEAF1O75398 565 aaPredicted RBP14.34□□□□□ -0.11
SMN2-216ENST00000638794 RGS9O75916 674 aaPredicted RBP14.34□□□□□ -0.11
SMN2-216ENST00000638794 MPZL1O95297 269 aa14.34□□□□□ -0.11
SMN2-216ENST00000638794 AVPP01185 164 aa14.34□□□□□ -0.11
SMN2-216ENST00000638794 IFNA14P01570 189 aa14.34□□□□□ -0.11
SMN2-216ENST00000638794 MPV17P39210 176 aa14.34□□□□□ -0.11
SMN2-216ENST00000638794 ZNF81P51508 661 aa14.34□□□□□ -0.11
SMN2-216ENST00000638794 ERVK-25P63136 954 aa14.34□□□□□ -0.11
SMN2-216ENST00000638794 PSG4Q00888 419 aa14.34□□□□□ -0.11
SMN2-216ENST00000638794 SCGB2A2Q13296 93 aa14.34□□□□□ -0.11
SMN2-216ENST00000638794 CYBRD1Q53TN4 286 aa14.34□□□□□ -0.11
SMN2-216ENST00000638794 ALG10Q5BKT4 473 aa14.34□□□□□ -0.11
SMN2-216ENST00000638794 THEM4Q5T1C6 240 aa14.34□□□□□ -0.11
SMN2-216ENST00000638794 ACSM5Q6NUN0 579 aa14.34□□□□□ -0.11
SMN2-216ENST00000638794 SLC25A47Q6Q0C1 308 aa14.34□□□□□ -0.11
SMN2-216ENST00000638794 HDXQ7Z353 690 aa14.34□□□□□ -0.11
SMN2-216ENST00000638794 CLDN22Q8N7P3 220 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms