RNA–Protein interactions for RNA: ENST00000638708.1

STRADA-231, Transcript of STE20-related kinase adaptor alpha, human

TSL 2 BASIC

Gene STRADA, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-231	ENST00000638708	PRRT3	Q5FWE3	981 aa		10.07	□□□□□ -0.8
STRADA-231	ENST00000638708	NSUN5P2	Q63ZY6	315 aa		10.07	□□□□□ -0.8
STRADA-231	ENST00000638708	TBC1D3C	Q6IPX1	549 aa		10.07	□□□□□ -0.8
STRADA-231	ENST00000638708	EIF5AL1	Q6IS14	154 aa	Known RBP	10.07	□□□□□ -0.8
STRADA-231	ENST00000638708	SLC39A5	Q6ZMH5	540 aa		10.07	□□□□□ -0.8
STRADA-231	ENST00000638708	TBC1D3	Q8IZP1	549 aa	Predicted RBP	10.07	□□□□□ -0.8
STRADA-231	ENST00000638708	ZNF619	Q8N2I2	560 aa		10.07	□□□□□ -0.8
STRADA-231	ENST00000638708	ARL14EP	Q8N8R7	260 aa	Predicted RBP	10.07	□□□□□ -0.8
STRADA-231	ENST00000638708	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	10.07	□□□□□ -0.8
STRADA-231	ENST00000638708	HHIPL1	Q96JK4	782 aa		10.07	□□□□□ -0.8
STRADA-231	ENST00000638708		Q96M85	177 aa		10.07	□□□□□ -0.8
STRADA-231	ENST00000638708	ZNF681	Q96N22	645 aa		10.07	□□□□□ -0.8
STRADA-231	ENST00000638708	PRRT1	Q99946	306 aa		10.07	□□□□□ -0.8
STRADA-231	ENST00000638708	CHST5	Q9GZS9	411 aa		10.07	□□□□□ -0.8
STRADA-231	ENST00000638708	ZNF350	Q9GZX5	532 aa		10.07	□□□□□ -0.8
STRADA-231	ENST00000638708	OR2AG1	Q9H205	316 aa		10.07	□□□□□ -0.8
STRADA-231	ENST00000638708	OR52A5	Q9H2C5	316 aa		10.07	□□□□□ -0.8
STRADA-231	ENST00000638708	SAGE1	Q9NXZ1	904 aa		10.07	□□□□□ -0.8
STRADA-231	ENST00000638708	KCNE5	Q9UJ90	142 aa		10.07	□□□□□ -0.8
STRADA-231	ENST00000638708	ADAM18	Q9Y3Q7	739 aa		10.07	□□□□□ -0.8
STRADA-231	ENST00000638708	YIPF1	Q9Y548	306 aa		10.07	□□□□□ -0.8
STRADA-231	ENST00000638708	LRRK1	Q38SD2	2015 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	EEF1E1-BLOC1S5	C9J1V9	151 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	SLC17A2	O00624	439 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	DOK2	O60496	412 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	MED6	O75586	246 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	NDUFB2	O95178	105 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	ELFN1	P0C7U0	828 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	LIPC	P11150	499 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	SLC2A1	P11166	492 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	LYL1	P12980	280 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	HIST1H1T	P22492	207 aa	Predicted RBP	10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	S100A2	P29034	98 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	TACR3	P29371	465 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	CDX1	P47902	265 aa	Predicted RBP	10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	CX3CR1	P49238	355 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	CSNK1G2	P78368	415 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	CYCS	P99999	105 aa	Known RBP	10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	ELOC	Q15369	112 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	TGIF1	Q15583	401 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	ZNF585A	Q6P3V2	769 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	OR2A12	Q8NGT7	310 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	OR2L2	Q8NH16	312 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	ZNRF4	Q8WWF5	429 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	THRSP	Q92748	146 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	FAM3D	Q96BQ1	224 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	TRIM43	Q96BQ3	446 aa	Predicted RBP	10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	RRNAD1	Q96FB5	475 aa	Known RBP	10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	MARS2	Q96GW9	593 aa	Known RBP	10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	AKR1E2	Q96JD6	320 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	SLC6A7	Q99884	636 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	ZNF559	Q9BR84	538 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	NMNAT2	Q9BZQ4	307 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	CST11	Q9H112	138 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	PRDM13	Q9H4Q3	707 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	FN3KRP	Q9HA64	309 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	PARP11	Q9NR21	331 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	COL4A6	Q14031	1691 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	CENPF	P49454	3210 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708	EML5	Q05BV3	1969 aa		10.06	□□□□□ -0.8
STRADA-231	ENST00000638708		A0A1B0GWJ7	208 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	SYNDIG1L	A6NDD5	238 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	C4orf51	C9J302	202 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	C1QTNF3-AMACR	E9PGA6	284 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	PSMD9	O00233	223 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	BCAT2	O15382	392 aa	Predicted RBP	10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	KCNAB3	O43448	404 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	ADAMTS4	O75173	837 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	GLCE	O94923	617 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	ABHD16A	O95870	558 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	SNRNP70	P08621	437 aa	Known RBP	10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	OR8G3P	P0DMU2	310 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	NME1	P15531	152 aa	Known RBP	10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	OR1D2	P34982	312 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	GSK3A	P49840	483 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	SKP2	Q13309	424 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	ZIC1	Q15915	447 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	SCGB2B2	Q4G0G5	96 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	LBH	Q53QV2	105 aa	Predicted RBP	10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	ARHGAP40	Q5TG30	622 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	ZNF614	Q8N883	585 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	ACOT4	Q8N9L9	421 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	OR56B1	Q8NGI3	324 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	OR6K6	Q8NGW6	343 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	OR2G2	Q8NGZ5	317 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	AKR7L	Q8NHP1	331 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	ASB17	Q8WXJ9	295 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	ZNF514	Q96K75	400 aa	Predicted RBP	10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	RHOV	Q96L33	236 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	TMEM68	Q96MH6	324 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	SDF2	Q99470	211 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	RNF126	Q9BV68	326 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	FRRS1L	Q9P0K9	344 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	MSRA	Q9UJ68	235 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	FBXL21	Q9UKT6	434 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	TMEM184B	Q9Y519	407 aa	Predicted RBP	10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	ENTPD2	Q9Y5L3	495 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708	IER3IP1	Q9Y5U9	82 aa		10.05	□□□□□ -0.8
STRADA-231	ENST00000638708		A0A0A6YYC8	382 aa	Predicted RBP	10.05	□□□□□ -0.8
STRADA-231	ENST00000638708		A0A0B4J2E0	115 aa		10.05	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms