RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 TSEN15Q8WW01 171 aaKnown RBP19.3■□□□□ 0.68
CLN6-224ENST00000638076 C5orf34Q96MH7 638 aa19.3■□□□□ 0.68
CLN6-224ENST00000638076 RASL10BQ96S79 203 aa19.3■□□□□ 0.68
CLN6-224ENST00000638076 MRI1Q9BV20 369 aa19.3■□□□□ 0.68
CLN6-224ENST00000638076 DPAGT1Q9H3H5 408 aa19.3■□□□□ 0.68
CLN6-224ENST00000638076 CENPBD1B2RD01 187 aa19.29■□□□□ 0.68
CLN6-224ENST00000638076 CCR9P51686 369 aa19.29■□□□□ 0.68
CLN6-224ENST00000638076 BTG1P62324 171 aa19.29■□□□□ 0.68
CLN6-224ENST00000638076 HSF1Q00613 529 aa19.29■□□□□ 0.68
CLN6-224ENST00000638076 BTBD16Q32M84 506 aa19.29■□□□□ 0.68
CLN6-224ENST00000638076 OR7E24Q6IFN5 339 aa19.29■□□□□ 0.68
CLN6-224ENST00000638076 MDGA2Q7Z553 956 aa19.29■□□□□ 0.68
CLN6-224ENST00000638076 DND1Q8IYX4 353 aaKnown RBP19.29■□□□□ 0.68
CLN6-224ENST00000638076 DEFB123Q8N688 67 aa19.29■□□□□ 0.68
CLN6-224ENST00000638076 GCDHQ92947 438 aaPredicted RBP19.29■□□□□ 0.68
CLN6-224ENST00000638076 PPP1R14AQ96A00 147 aa19.29■□□□□ 0.68
CLN6-224ENST00000638076 MRGPRX4Q96LA9 322 aa19.29■□□□□ 0.68
CLN6-224ENST00000638076 SDHAF3Q9NRP4 125 aa19.29■□□□□ 0.68
CLN6-224ENST00000638076 NUDT15Q9NV35 164 aa19.29■□□□□ 0.68
CLN6-224ENST00000638076 RABL2AQ9UBK7 228 aaPredicted RBP19.29■□□□□ 0.68
CLN6-224ENST00000638076 RABL2BQ9UNT1 228 aa19.29■□□□□ 0.68
CLN6-224ENST00000638076 MUC3AQ02505 3323 aa19.29■□□□□ 0.68
CLN6-224ENST00000638076 TRAV6A0A075B6T7 132 aa19.29■□□□□ 0.68
CLN6-224ENST00000638076 LIPT2A6NK58 231 aa19.29■□□□□ 0.68
CLN6-224ENST00000638076 RAD1O60671 282 aa19.29■□□□□ 0.68
CLN6-224ENST00000638076 RRAS2P62070 204 aaPredicted RBP19.29■□□□□ 0.68
CLN6-224ENST00000638076 NOXA1Q86UR1 476 aa19.29■□□□□ 0.68
CLN6-224ENST00000638076 POC1BQ8TC44 478 aa19.29■□□□□ 0.68
CLN6-224ENST00000638076 MCHR2Q969V1 340 aa19.29■□□□□ 0.68
CLN6-224ENST00000638076 WDR54Q9H977 334 aa19.29■□□□□ 0.68
CLN6-224ENST00000638076 GPN3Q9UHW5 284 aaPredicted RBP19.29■□□□□ 0.68
CLN6-224ENST00000638076 IGLV3-32A0A0A0MS00 114 aa19.28■□□□□ 0.68
CLN6-224ENST00000638076 GDNFP39905 211 aa19.28■□□□□ 0.68
CLN6-224ENST00000638076 SPACA9Q96E40 222 aaPredicted RBP19.28■□□□□ 0.68
CLN6-224ENST00000638076 S100A16Q96FQ6 103 aaKnown RBP19.28■□□□□ 0.68
CLN6-224ENST00000638076 KCNK17Q96T54 332 aa19.28■□□□□ 0.68
CLN6-224ENST00000638076 POTEKPQ9BYX7 375 aa19.28■□□□□ 0.68
CLN6-224ENST00000638076 MCUBQ9NWR8 336 aa19.28■□□□□ 0.68
CLN6-224ENST00000638076 ALKBH4Q9NXW9 302 aa19.28■□□□□ 0.68
CLN6-224ENST00000638076 LRP12Q9Y561 859 aa19.28■□□□□ 0.68
CLN6-224ENST00000638076 H0YC42 278 aa19.28■□□□□ 0.68
CLN6-224ENST00000638076 NTN3O00634 580 aaPredicted RBP19.28■□□□□ 0.68
CLN6-224ENST00000638076 CYC1P08574 325 aa19.28■□□□□ 0.68
CLN6-224ENST00000638076 GIFP27352 417 aa19.28■□□□□ 0.68
CLN6-224ENST00000638076 RIDAP52758 137 aaKnown RBP19.28■□□□□ 0.68
CLN6-224ENST00000638076 ZXDAP98168 799 aa19.28■□□□□ 0.68
CLN6-224ENST00000638076 MFGE8Q08431 387 aaPredicted RBP19.28■□□□□ 0.68
CLN6-224ENST00000638076 KLF9Q13886 244 aaPredicted RBP19.28■□□□□ 0.68
CLN6-224ENST00000638076 PCOLCEQ15113 449 aa19.28■□□□□ 0.68
CLN6-224ENST00000638076 TRIM61Q5EBN2 209 aa19.28■□□□□ 0.68
CLN6-224ENST00000638076 SLC25A53Q5H9E4 307 aa19.28■□□□□ 0.68
CLN6-224ENST00000638076 BCL2L15Q5TBC7 163 aa19.28■□□□□ 0.68
CLN6-224ENST00000638076 BMPERQ8N8U9 685 aa19.28■□□□□ 0.68
CLN6-224ENST00000638076 ZNF454Q8N9F8 522 aa19.28■□□□□ 0.68
CLN6-224ENST00000638076 OR52N5Q8NH56 324 aa19.28■□□□□ 0.68
CLN6-224ENST00000638076 ELP5Q8TE02 316 aa19.28■□□□□ 0.68
CLN6-224ENST00000638076 RNF170Q96K19 258 aa19.28■□□□□ 0.68
CLN6-224ENST00000638076 IGKV1D-43A0A0B4J1Z2 117 aa19.27■□□□□ 0.68
CLN6-224ENST00000638076 CER1O95813 267 aa19.27■□□□□ 0.68
CLN6-224ENST00000638076 TCRBP04435 133 aa19.27■□□□□ 0.68
CLN6-224ENST00000638076 RAB40ALP0C0E4 278 aa19.27■□□□□ 0.68
CLN6-224ENST00000638076 CCL4P13236 92 aa19.27■□□□□ 0.68
CLN6-224ENST00000638076 ZNF823P16415 610 aa19.27■□□□□ 0.68
CLN6-224ENST00000638076 PTGS2P35354 604 aa19.27■□□□□ 0.68
CLN6-224ENST00000638076 MAP2K6P52564 334 aa19.27■□□□□ 0.68
CLN6-224ENST00000638076 C19orf57Q0VDD7 668 aa19.27■□□□□ 0.68
CLN6-224ENST00000638076 MYBPHQ13203 477 aa19.27■□□□□ 0.68
CLN6-224ENST00000638076 DNM1P34Q6PK57 102 aa19.27■□□□□ 0.68
CLN6-224ENST00000638076 TCTE3Q8IZS6 198 aa19.27■□□□□ 0.68
CLN6-224ENST00000638076 AGBL5Q8NDL9 886 aa19.27■□□□□ 0.68
CLN6-224ENST00000638076 SLC26A10Q8NG04 563 aa19.27■□□□□ 0.68
CLN6-224ENST00000638076 RAB40AQ8WXH6 277 aa19.27■□□□□ 0.68
CLN6-224ENST00000638076 AKAP1Q92667 903 aaKnown RBP eCLIP19.27■□□□□ 0.682e-7■■□□□ 11.5
CLN6-224ENST00000638076 FBXL2Q9UKC9 423 aa19.27■□□□□ 0.68
CLN6-224ENST00000638076 NXT1Q9UKK6 140 aaKnown RBP19.27■□□□□ 0.68
CLN6-224ENST00000638076 FOXJ3Q9UPW0 622 aa19.27■□□□□ 0.68
CLN6-224ENST00000638076 B3GALT5Q9Y2C3 310 aa19.27■□□□□ 0.68
CLN6-224ENST00000638076 B3GALT1Q9Y5Z6 326 aa19.27■□□□□ 0.68
CLN6-224ENST00000638076 NPIPB13A6NJU9 1138 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 NPIPB4C9JG80 1138 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 MT-ND4P03905 459 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 OPN1LWP04000 364 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 KLK3P07288 261 aaPredicted RBP19.26■□□□□ 0.67
CLN6-224ENST00000638076 ART1P52961 327 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 RPS15P62841 145 aaKnown RBP19.26■□□□□ 0.67
CLN6-224ENST00000638076 SNTB2Q13425 540 aaKnown RBP19.26■□□□□ 0.67
CLN6-224ENST00000638076 OR5M1Q8NGP8 315 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 MIB2Q96AX9 1013 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 HAVCR1Q96D42 359 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 GTPBP2Q9BX10 602 aaKnown RBP19.26■□□□□ 0.67
CLN6-224ENST00000638076 TMEM185BQ9H7F4 350 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 NUBP2Q9Y5Y2 271 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 ETV7Q9Y603 341 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 A0A0A6YYJ9 748 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 DKK1O94907 266 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 DHFRP00374 187 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 YES1P07947 543 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 CELA2AP08217 269 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 RCVRNP35243 200 aa19.26■□□□□ 0.67
CLN6-224ENST00000638076 DUSP3P51452 185 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms