RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 LALBAP00709 142 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 HIST1H1CP16403 213 aaKnown RBP10.41□□□□□ -0.74
CLN6-217ENST00000636964 ZP1P60852 638 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 ERVK-25P63136 954 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 EGR4Q05215 589 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 C1QL3Q5VWW1 255 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 BICRALQ6AI39 1079 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 C1orf122Q6ZSJ8 110 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 ASB18Q6ZVZ8 466 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 MEPCEQ7L2J0 689 aaKnown RBP10.41□□□□□ -0.74
CLN6-217ENST00000636964 ADAMTS14Q8WXS8 1223 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 MR1Q95460 341 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 LPAR4Q99677 370 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 LAT2Q9GZY6 243 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 RNF32Q9H0A6 362 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 MED28Q9H204 178 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 ING4Q9UNL4 249 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 RP1L1Q8IWN7 2480 aaPredicted RBP10.41□□□□□ -0.74
CLN6-217ENST00000636964 A0A1B0GVC2 190 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 hCG_1807616A0A1W2PRN6 198 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 A6NIN4 97 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 TO15178 435 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 NDUFB2O95178 105 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 PEPDP12955 493 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 AQP2P41181 271 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 PNLIPRP2P54317 469 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 PPP3R1P63098 170 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 CPEB2Q7Z5Q1 589 aaKnown RBP10.41□□□□□ -0.74
CLN6-217ENST00000636964 TMEM99Q8N816 258 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 KCTD7Q96MP8 289 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 TEAD3Q99594 435 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 TTTY10Q9BZA0 68 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 ULBP3Q9BZM4 244 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 RXFP3Q9NSD7 469 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 SDHAF2Q9NX18 166 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 ZNF69Q9UC07 566 aa10.41□□□□□ -0.74
CLN6-217ENST00000636964 CNOT1A5YKK6 2376 aaKnown RBP10.4□□□□□ -0.74
CLN6-217ENST00000636964 VSTM2BA6NLU5 285 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 OR6C76A6NM76 312 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 ALG1L2C9J202 215 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 GPR37O15354 613 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 FGF5P12034 268 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 S100PP25815 95 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 SRP9P49458 86 aaKnown RBP10.4□□□□□ -0.74
CLN6-217ENST00000636964 NRG3P56975 720 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 BTG1P62324 171 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 LTBQ06643 244 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 ZFP36L1Q07352 338 aaKnown RBP10.4□□□□□ -0.74
CLN6-217ENST00000636964 ZNF57Q68EA5 555 aaPredicted RBP10.4□□□□□ -0.74
CLN6-217ENST00000636964 ISG20L2Q9H9L3 353 aaKnown RBP10.4□□□□□ -0.74
CLN6-217ENST00000636964 LNP1A1A4G5 178 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 RGS11O94810 467 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 F13BP05160 661 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 ELK1P19419 428 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 HCCSP53701 268 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 DEFA6Q01524 100 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 OR10H4Q8NGA5 316 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 OR2T4Q8NH00 348 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 SPRYD4Q8WW59 207 aaPredicted RBP10.4□□□□□ -0.74
CLN6-217ENST00000636964 RASD2Q96D21 266 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 ZNF251Q9BRH9 671 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 GSX2Q9BZM3 304 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 OPN3Q9H1Y3 402 aaPredicted RBP10.4□□□□□ -0.74
CLN6-217ENST00000636964 NANSQ9NR45 359 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 DLL4Q9NR61 685 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 NUDT15Q9NV35 164 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 EXOSC1Q9Y3B2 195 aaKnown RBP10.4□□□□□ -0.74
CLN6-217ENST00000636964 DMRT1Q9Y5R6 373 aa10.4□□□□□ -0.74
CLN6-217ENST00000636964 TMEM200CA6NKL6 621 aa10.4□□□□□ -0.75
CLN6-217ENST00000636964 FADS1O60427 444 aa10.4□□□□□ -0.75
CLN6-217ENST00000636964 WDPCPO95876 746 aa10.4□□□□□ -0.75
CLN6-217ENST00000636964 PNMTP11086 282 aa10.4□□□□□ -0.75
CLN6-217ENST00000636964 AVPR2P30518 371 aa10.4□□□□□ -0.75
CLN6-217ENST00000636964 GRK6P43250 576 aa10.4□□□□□ -0.75
CLN6-217ENST00000636964 CCR9P51686 369 aa10.4□□□□□ -0.75
CLN6-217ENST00000636964 IL11RAQ14626 422 aa10.4□□□□□ -0.75
CLN6-217ENST00000636964 ZNF169Q14929 603 aaPredicted RBP10.4□□□□□ -0.75
CLN6-217ENST00000636964 PON3Q15166 354 aa10.4□□□□□ -0.75
CLN6-217ENST00000636964 RNLSQ5VYX0 342 aa10.4□□□□□ -0.75
CLN6-217ENST00000636964 GID4Q8IVV7 300 aa10.4□□□□□ -0.75
CLN6-217ENST00000636964 ZPLD1Q8TCW7 415 aa10.4□□□□□ -0.75
CLN6-217ENST00000636964 HGDQ93099 445 aa10.4□□□□□ -0.75
CLN6-217ENST00000636964 KISS1RQ969F8 398 aaPredicted RBP10.4□□□□□ -0.75
CLN6-217ENST00000636964 C1GALT1C1Q96EU7 318 aa10.4□□□□□ -0.75
CLN6-217ENST00000636964 NMNAT3Q96T66 252 aa10.4□□□□□ -0.75
CLN6-217ENST00000636964 SEMA4CQ9C0C4 833 aa10.4□□□□□ -0.75
CLN6-217ENST00000636964 EXOSC3Q9NQT5 275 aaKnown RBP10.4□□□□□ -0.75
CLN6-217ENST00000636964 EXOGQ9Y2C4 368 aaKnown RBP10.4□□□□□ -0.75
CLN6-217ENST00000636964 ZNF337Q9Y3M9 751 aa10.4□□□□□ -0.75
CLN6-217ENST00000636964 PTPRZ1P23471 2315 aaPredicted RBP10.39□□□□□ -0.75
CLN6-217ENST00000636964 IRGMA1A4Y4 181 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 FAM171A2A8MVW0 826 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 MASP2O00187 686 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 IFNA7P01567 189 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 CELA2AP08217 269 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 CXCR1P25024 350 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 GPX4P36969 197 aaPredicted RBP10.39□□□□□ -0.75
CLN6-217ENST00000636964 NHLRC3Q5JS37 347 aa10.39□□□□□ -0.75
CLN6-217ENST00000636964 MRPL14Q6P1L8 145 aaKnown RBP10.39□□□□□ -0.75
CLN6-217ENST00000636964 BEST4Q8NFU0 473 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms