RNA–Protein interactions for RNA: ENST00000636652.1

CHRNA4-216, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 195 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-216ENST00000636652 ZNF627Q7L945 461 aa11.76□□□□□ -0.53
CHRNA4-216ENST00000636652 C1orf162Q8NEQ5 155 aaPredicted RBP11.76□□□□□ -0.53
CHRNA4-216ENST00000636652 SLC26A10Q8NG04 563 aa11.76□□□□□ -0.53
CHRNA4-216ENST00000636652 OR51L1Q8NGJ5 315 aa11.76□□□□□ -0.53
CHRNA4-216ENST00000636652 LILRB4Q8NHJ6 448 aa11.76□□□□□ -0.53
CHRNA4-216ENST00000636652 ZNRF4Q8WWF5 429 aa11.76□□□□□ -0.53
CHRNA4-216ENST00000636652 KISS1RQ969F8 398 aaPredicted RBP11.76□□□□□ -0.53
CHRNA4-216ENST00000636652 ZNF837Q96EG3 531 aaPredicted RBP11.76□□□□□ -0.53
CHRNA4-216ENST00000636652 DOCK7Q96N67 2140 aa11.76□□□□□ -0.53
CHRNA4-216ENST00000636652 TEAD3Q99594 435 aa11.76□□□□□ -0.53
CHRNA4-216ENST00000636652 FOXB1Q99853 325 aa11.76□□□□□ -0.53
CHRNA4-216ENST00000636652 TMEM38BQ9NVV0 291 aa11.76□□□□□ -0.53
CHRNA4-216ENST00000636652 HAO2Q9NYQ3 351 aa11.76□□□□□ -0.53
CHRNA4-216ENST00000636652 ARHGAP21Q5T5U3 1957 aa11.76□□□□□ -0.53
CHRNA4-216ENST00000636652 PHF3Q92576 2039 aaKnown RBP11.76□□□□□ -0.53
CHRNA4-216ENST00000636652 HRGP04196 525 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 MSR1P21757 451 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 GSTT1P30711 240 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 ASCL1P50553 236 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 FOXG1P55316 489 aaPredicted RBP11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 CXCR4P61073 352 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 CSNK2BP67870 215 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 ARF1P84077 181 aaKnown RBP11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 HSF2Q03933 536 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 ZNF91Q05481 1191 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 DBPQ10586 325 aaPredicted RBP11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 GGTLC2Q14390 218 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 KCNMB1Q16558 191 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 FBXL19-AS1Q494R0 122 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 C6orf141Q5SZD1 244 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 LAIR2Q6ISS4 152 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 ANKRD16Q6P6B7 361 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 LUZP2Q86TE4 346 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 OR1K1Q8NGR3 316 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 NABP1Q96AH0 204 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 ZMYND19Q96E35 227 aaPredicted RBP11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 BOD1Q96IK1 185 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 NELFAQ9H3P2 528 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 MARCH7Q9H992 704 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 SEC61A2Q9H9S3 476 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 POLE4Q9NR33 117 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 ELOVL5Q9NYP7 299 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 LRCH1Q9Y2L9 728 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 RPL36Q9Y3U8 105 aaKnown RBP11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 MED12LQ86YW9 2145 aa11.75□□□□□ -0.53
CHRNA4-216ENST00000636652 CHD6Q8TD26 2715 aa11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 RP1L1Q8IWN7 2480 aaPredicted RBP11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 HLA-DQA2P01906 255 aa11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 DBTP11182 482 aaKnown RBP11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 PSMB1P20618 241 aaKnown RBP11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 CDAP32320 146 aa11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 MTNR1AP48039 350 aa11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 NUDT6P53370 316 aa11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 POU4F2Q12837 409 aa11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 SMN1Q16637 294 aaKnown RBP11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 SFRP5Q5T4F7 317 aa11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 C9orf135Q5VTT2 229 aa11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 XKRXQ6PP77 449 aa11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 ZNF813Q6ZN06 617 aa11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 CXorf67Q86X51 503 aaPredicted RBP11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 ZNF808Q8N4W9 903 aaPredicted RBP11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 ZNF433Q8N7K0 673 aaPredicted RBP11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 CA5BP1Q8WTZ4 195 aa11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 C11orf40Q8WZ69 217 aa11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 FOXN4Q96NZ1 517 aa11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 CNN2Q99439 309 aaKnown RBP11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 HDHD5Q9BXW7 423 aa11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 SIAEQ9HAT2 523 aa11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 PLCXD1Q9NUJ7 323 aa11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 MRPL22Q9NWU5 206 aaKnown RBP11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 UBAP1Q9NZ09 502 aa11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 KCNG2Q9UJ96 466 aa11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 COMMD3-BMI1R4GMX3 469 aa11.74□□□□□ -0.53
CHRNA4-216ENST00000636652 CIB4A0PJX0 185 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 IRGMA1A4Y4 181 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 TVP23AA6NH52 213 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 FAM90A27PA6NNH2 459 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 SLC1A7O00341 560 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 ZG16O60844 167 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 LYZL6O75951 148 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 SEC14L2O76054 403 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 FARS2O95363 451 aaKnown RBP11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 GPANK1O95872 356 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 TFP02787 698 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 CCDC159P0C7I6 412 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 OR8G3PP0DMU2 310 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 B4GALT1P15291 398 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 ZNF823P16415 610 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 CD79BP40259 229 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 LSM6P62312 80 aaKnown RBP11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 FAM27BQ5VT28 67 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 OR7E24Q6IFN5 339 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 KLHL24Q6TFL4 600 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 B3GLCTQ6Y288 498 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 DPPA2Q7Z7J5 298 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 TIGD4Q8IY51 512 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 C17orf78Q8N4C9 275 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 SLC22A24Q8N4F4 322 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 ZNF511Q8NB15 262 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 OR10H5Q8NGA6 315 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms