RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 C9orf172C9J069 976 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 OR7C2O60412 319 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 SIX6O95475 246 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 S100A4P26447 101 aaKnown RBP16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 HTR2CP28335 458 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 INSM1Q01101 510 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 PGGHGQ32M88 737 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 GLTPQ9NZD2 209 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 OR2J2O76002 312 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 RIPPLY1Q0D2K3 151 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 CRMP1Q14194 572 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 RTP5Q14D33 572 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 C15orf54Q8N8G6 183 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 TGIF2Q9GZN2 237 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 TAS2R5Q9NYW4 299 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 IFT172Q9UG01 1749 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 C10orf71Q711Q0 1435 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 HPRP00739 348 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 QDPRP09417 244 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 PTTG1IPP53801 180 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 CDK5R2Q13319 367 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 CRISPLD2Q9H0B8 497 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 GAPDHSO14556 408 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 FZD7O75084 574 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 GLCEO94923 617 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 MEF2DQ14814 521 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 PMS2P1A4D2B8 440 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 SRP9P49458 86 aaKnown RBP16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 TAS2R19P59542 299 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 OR56B4Q8NH76 319 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 TMEM163Q8TC26 289 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 LGALS14Q8TCE9 139 aa16.39■□□□□ 0.21
CACNA1A-227ENST00000636549 PIGBOS1A0A0B4J2F0 54 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 RTL8BQ17RB0 113 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 SKA3Q8IX90 412 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 CTSFQ9UBX1 484 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 A0A1B0GX78 115 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 ZNF320A2RRD8 509 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 ZNF93P35789 620 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 CPZQ66K79 652 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 STUMQ69YW2 141 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 ZNF740Q8NDX6 193 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 TAGLN2P37802 199 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 MINDY1Q8N5J2 469 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 PLPP5Q8NEB5 264 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 OR5K3A6NET4 321 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 MMP12P39900 470 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 RPL13AP40429 203 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 GLYATL3Q5SZD4 288 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 NECAP2Q9NVZ3 263 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 MAGEB4O15481 346 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 MYF6P23409 242 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 SHC1P29353 583 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 CLDN15P56746 228 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 TFF2Q03403 129 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 CCSMST1Q4G0I0 132 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 YOD1Q5VVQ6 348 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 ZFP62Q8NB50 900 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 OR4Q3Q8NH05 313 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 OR51F2Q8NH61 342 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 ASIC5Q9NY37 505 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 SLAMF8Q9P0V8 285 aa16.38■□□□□ 0.21
CACNA1A-227ENST00000636549 CHD4Q14839 1912 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 LINC01553A4QN01 128 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 C2CD4DB7Z1M9 353 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 NME2P1O60361 137 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 RAP2BP61225 183 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 SMN1Q16637 294 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 HRO43593 1189 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 SLC25A6P12236 298 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 PRDX4Q13162 271 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 HAGHQ16775 308 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 FAM109AQ8N4B1 249 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 OR6T1Q8NGN1 323 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 OR51E1Q8TCB6 317 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 SLC22A23A1A5C7 686 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 ATXN1LP0C7T5 689 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 ADRA1AP35348 466 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 PRLHRP49683 370 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 BTG2P78543 158 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 SRSF5Q13243 272 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 ANKRD13BQ86YJ7 626 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 APH1BQ8WW43 257 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 C3P01024 1663 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 WDR1O75083 606 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 RGS11O94810 467 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 CT45A10P0DMU9 189 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 CDAP32320 146 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 OPRL1P41146 370 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 MRPL19P49406 292 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 SUOXP51687 545 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 SUB1P53999 127 aaKnown RBP eCLIP16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 SLC5A12Q1EHB4 618 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 SEMA6DQ8NFY4 1073 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 TRAV36DV7A0A075B6V5 113 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 SCGB1C2P0DMR2 95 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 ZNF169Q14929 603 aaPredicted RBP16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 ANGPTL5Q86XS5 388 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 GALNT16Q8N428 558 aa16.37■□□□□ 0.21
CACNA1A-227ENST00000636549 SLC37A2Q8TED4 501 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms