RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 CCL21O00585 134 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 BHLHE40O14503 412 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 SCG5P05408 212 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 STSP08842 583 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 TMIGD3P0DMS9 266 aaPredicted RBP12.81□□□□□ -0.36
LINC00339-208ENST00000634934 GAAP10253 952 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 AGTR1P30556 359 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 TIMP3P35625 211 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 ACVR1BP36896 505 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 ARMCX4Q5H9R4 360 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 CARD17Q5XLA6 110 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 TMEM211Q6ICI0 200 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 NHLRC1Q6VVB1 395 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 NCCRP1Q6ZVX7 275 aaPredicted RBP12.81□□□□□ -0.36
LINC00339-208ENST00000634934 AAED1Q7RTV5 226 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 CCDC190Q86UF4 302 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 LNX2Q8N448 690 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 RASD2Q96D21 266 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 WDFY2Q96P53 400 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 TEX12Q9BXU0 123 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 GP6Q9HCN6 339 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 CRNNQ9UBG3 495 aaPredicted RBP12.81□□□□□ -0.36
LINC00339-208ENST00000634934 BAIAP2Q9UQB8 552 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 MEMO1Q9Y316 297 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 LSM2Q9Y333 95 aaKnown RBP12.81□□□□□ -0.36
LINC00339-208ENST00000634934 EMC9Q9Y3B6 208 aa12.81□□□□□ -0.36
LINC00339-208ENST00000634934 XKRYO14609 159 aa12.8□□□□□ -0.36
LINC00339-208ENST00000634934 ARPC3O15145 178 aa12.8□□□□□ -0.36
LINC00339-208ENST00000634934 AKAP8O43823 692 aaKnown RBP12.8□□□□□ -0.36
LINC00339-208ENST00000634934 SS18L1O75177 396 aaPredicted RBP12.8□□□□□ -0.36
LINC00339-208ENST00000634934 MRPL33O75394 65 aaKnown RBP12.8□□□□□ -0.36
LINC00339-208ENST00000634934 IGHMP01871 453 aa12.8□□□□□ -0.36
LINC00339-208ENST00000634934 APEHP13798 732 aaKnown RBP12.8□□□□□ -0.36
LINC00339-208ENST00000634934 SDHAP31040 664 aa12.8□□□□□ -0.36
LINC00339-208ENST00000634934 CDK5Q00535 292 aa12.8□□□□□ -0.36
LINC00339-208ENST00000634934 FOXF2Q12947 444 aa12.8□□□□□ -0.36
LINC00339-208ENST00000634934 CAMK2DQ13557 499 aa12.8□□□□□ -0.36
LINC00339-208ENST00000634934 ARMC4Q5T2S8 1044 aa12.8□□□□□ -0.36
LINC00339-208ENST00000634934 GPR139Q6DWJ6 353 aa12.8□□□□□ -0.36
LINC00339-208ENST00000634934 ACSM5Q6NUN0 579 aa12.8□□□□□ -0.36
LINC00339-208ENST00000634934 NIPAL3Q6P499 406 aa12.8□□□□□ -0.36
LINC00339-208ENST00000634934 CASP12Q6UXS9 341 aa12.8□□□□□ -0.36
LINC00339-208ENST00000634934 FAM214BQ7L5A3 538 aa12.8□□□□□ -0.36
LINC00339-208ENST00000634934 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.8□□□□□ -0.36
LINC00339-208ENST00000634934 FAM122BQ7Z309 247 aa12.8□□□□□ -0.36
LINC00339-208ENST00000634934 NUFIP2Q7Z417 695 aaKnown RBP12.8□□□□□ -0.36
LINC00339-208ENST00000634934 ARIH2OSQ8N7S6 290 aa12.8□□□□□ -0.36
LINC00339-208ENST00000634934 OR8J1Q8NGP2 316 aa12.8□□□□□ -0.36
LINC00339-208ENST00000634934 ASB10Q8WXI3 467 aa12.8□□□□□ -0.36
LINC00339-208ENST00000634934 C12orf49Q9H741 205 aa12.8□□□□□ -0.36
LINC00339-208ENST00000634934 ISYNA1Q9NPH2 558 aa12.8□□□□□ -0.36
LINC00339-208ENST00000634934 MRPS18AQ9NVS2 196 aaKnown RBP12.8□□□□□ -0.36
LINC00339-208ENST00000634934 TVP23BQ9NYZ1 205 aa12.8□□□□□ -0.36
LINC00339-208ENST00000634934 AASSQ9UDR5 926 aa12.8□□□□□ -0.36
LINC00339-208ENST00000634934 IRGMA1A4Y4 181 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 A6NIZ1 184 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 NPIPB13A6NJU9 1138 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 NPIPB4C9JG80 1138 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 ARHGEF9O43307 516 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 IDH3BO43837 385 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 PTHP01270 115 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 HMGN1P05114 100 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 HIST1H1CP16403 213 aaKnown RBP12.79□□□□□ -0.36
LINC00339-208ENST00000634934 CEACAM8P31997 349 aaPredicted RBP12.79□□□□□ -0.36
LINC00339-208ENST00000634934 NTF4P34130 210 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 GRK5P34947 590 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 SELENOPP49908 381 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 DEFA1P59665 94 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 DEFA3P59666 94 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 RAP1BP61224 184 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 RAP1AP62834 184 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 RUNX1T1Q06455 604 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 RIPPLY2Q5TAB7 128 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 FAM205BPQ63HN1 556 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 HDDC2Q7Z4H3 204 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 FJX1Q86VR8 437 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 JAZF1Q86VZ6 243 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 WDFY1Q8IWB7 410 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 ZNF100Q8IYN0 542 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 NAXEQ8NCW5 288 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 PROKR2Q8NFJ6 384 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 OR4K13Q8NH42 304 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 OR6X1Q8NH79 312 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 TMEM45BQ96B21 275 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 ADAD1Q96M93 576 aaKnown RBP12.79□□□□□ -0.36
LINC00339-208ENST00000634934 ZFP3Q96NJ6 502 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 DMRTA2Q96SC8 542 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 MGLLQ99685 303 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 MOV10Q9HCE1 1003 aaKnown RBP12.79□□□□□ -0.36
LINC00339-208ENST00000634934 PARPBPQ9NWS1 579 aa12.79□□□□□ -0.36
LINC00339-208ENST00000634934 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.79□□□□□ -0.36
LINC00339-208ENST00000634934 RPL36Q9Y3U8 105 aaKnown RBP12.79□□□□□ -0.36
LINC00339-208ENST00000634934 COL12A1Q99715 3063 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 RIIAD1A6NNX1 92 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 H7C1C5 153 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 IMPA2O14732 288 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 LRRTM2O43300 516 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 SLC43A1O75387 559 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 SLC2A10O95528 541 aa12.78□□□□□ -0.36
LINC00339-208ENST00000634934 TXNDC12O95881 172 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms