RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 FUZQ9BT04 418 aa19.31■□□□□ 0.68
SF1-220ENST00000626028 WACQ9BTA9 647 aa19.31■□□□□ 0.68
SF1-220ENST00000626028 LRMDAQ9H2I8 198 aa19.31■□□□□ 0.68
SF1-220ENST00000626028 FAM53CQ9NYF3 392 aa19.31■□□□□ 0.68
SF1-220ENST00000626028 ACTR3BQ9P1U1 418 aa19.31■□□□□ 0.68
SF1-220ENST00000626028 GRHPRQ9UBQ7 328 aa19.31■□□□□ 0.68
SF1-220ENST00000626028 SIGLEC7Q9Y286 467 aa19.31■□□□□ 0.68
SF1-220ENST00000626028 UGT2A1Q9Y4X1 527 aa19.31■□□□□ 0.68
SF1-220ENST00000626028 B2RBV5 119 aa19.3■□□□□ 0.68
SF1-220ENST00000626028 RNF223E7ERA6 249 aa19.3■□□□□ 0.68
SF1-220ENST00000626028 PTP4A3O75365 173 aa19.3■□□□□ 0.68
SF1-220ENST00000626028 NDUFB2O95178 105 aa19.3■□□□□ 0.68
SF1-220ENST00000626028 SLC25A16P16260 332 aa19.3■□□□□ 0.68
SF1-220ENST00000626028 RAB39AQ14964 217 aa19.3■□□□□ 0.68
SF1-220ENST00000626028 FGFBP3Q8TAT2 258 aa19.3■□□□□ 0.68
SF1-220ENST00000626028 FAM168AQ92567 244 aa19.3■□□□□ 0.68
SF1-220ENST00000626028 FAM46AQ96IP4 442 aaKnown RBP19.3■□□□□ 0.68
SF1-220ENST00000626028 DOK1Q99704 481 aa19.3■□□□□ 0.68
SF1-220ENST00000626028 RAB1BQ9H0U4 201 aa19.3■□□□□ 0.68
SF1-220ENST00000626028 RNF121Q9H920 327 aa19.3■□□□□ 0.68
SF1-220ENST00000626028 AURKCQ9UQB9 309 aa19.3■□□□□ 0.68
SF1-220ENST00000626028 NAV3Q8IVL0 2385 aa19.3■□□□□ 0.68
SF1-220ENST00000626028 TRBV4-1A0A0J9YWV2 114 aa19.29■□□□□ 0.68
SF1-220ENST00000626028 IQCMA0A1B0GVH7 501 aa19.29■□□□□ 0.68
SF1-220ENST00000626028 SH3PXD2BA1X283 911 aa19.29■□□□□ 0.68
SF1-220ENST00000626028 NDUFS8O00217 210 aa19.29■□□□□ 0.68
SF1-220ENST00000626028 XKRYO14609 159 aa19.29■□□□□ 0.68
SF1-220ENST00000626028 GADD45GO95257 159 aa19.29■□□□□ 0.68
SF1-220ENST00000626028 SLC2A10O95528 541 aa19.29■□□□□ 0.68
SF1-220ENST00000626028 FABP3P05413 133 aa19.29■□□□□ 0.68
SF1-220ENST00000626028 MMP7P09237 267 aaPredicted RBP19.29■□□□□ 0.68
SF1-220ENST00000626028 IFNGR2P38484 337 aa19.29■□□□□ 0.68
SF1-220ENST00000626028 KRTAP21-3Q3LHN1 58 aa19.29■□□□□ 0.68
SF1-220ENST00000626028 KRT80Q6KB66 452 aa19.29■□□□□ 0.68
SF1-220ENST00000626028 FOXL2NBQ6ZUU3 175 aa19.29■□□□□ 0.68
SF1-220ENST00000626028 FAM122BQ7Z309 247 aa19.29■□□□□ 0.68
SF1-220ENST00000626028 SLC30A7Q8NEW0 376 aa19.29■□□□□ 0.68
SF1-220ENST00000626028 MRPL24Q96A35 216 aaKnown RBP19.29■□□□□ 0.68
SF1-220ENST00000626028 NABP1Q96AH0 204 aa19.29■□□□□ 0.68
SF1-220ENST00000626028 C1orf21Q9H246 121 aa19.29■□□□□ 0.68
SF1-220ENST00000626028 NRIP3Q9NQ35 241 aa19.29■□□□□ 0.68
SF1-220ENST00000626028 ADAM21Q9UKJ8 722 aa19.29■□□□□ 0.68
SF1-220ENST00000626028 KRT36O76013 467 aa19.28■□□□□ 0.68
SF1-220ENST00000626028 PATE4P0C8F1 98 aa19.28■□□□□ 0.68
SF1-220ENST00000626028 PCSK6P29122 969 aa19.28■□□□□ 0.68
SF1-220ENST00000626028 MSX2P35548 267 aaPredicted RBP19.28■□□□□ 0.68
SF1-220ENST00000626028 PCBD1P61457 104 aa19.28■□□□□ 0.68
SF1-220ENST00000626028 TBC1D28Q2M2D7 210 aa19.28■□□□□ 0.68
SF1-220ENST00000626028 SYT9Q86SS6 491 aa19.28■□□□□ 0.68
SF1-220ENST00000626028 ADCK1Q86TW2 530 aa19.28■□□□□ 0.68
SF1-220ENST00000626028 IGFN1Q86VF2 1251 aa19.28■□□□□ 0.68
SF1-220ENST00000626028 NEU4Q8WWR8 484 aaPredicted RBP19.28■□□□□ 0.68
SF1-220ENST00000626028 SORCS2Q96PQ0 1159 aa19.28■□□□□ 0.68
SF1-220ENST00000626028 CCNB1IP1Q9NPC3 277 aa19.28■□□□□ 0.68
SF1-220ENST00000626028 PRPF19Q9UMS4 504 aaKnown RBP19.28■□□□□ 0.68
SF1-220ENST00000626028 TMEM129A0AVI4 362 aa19.27■□□□□ 0.68
SF1-220ENST00000626028 CST2P09228 141 aa19.27■□□□□ 0.68
SF1-220ENST00000626028 APEHP13798 732 aaKnown RBP19.27■□□□□ 0.68
SF1-220ENST00000626028 SDHAP31040 664 aa19.27■□□□□ 0.68
SF1-220ENST00000626028 ERVK-25P63136 954 aa19.27■□□□□ 0.68
SF1-220ENST00000626028 FMODQ06828 376 aa19.27■□□□□ 0.68
SF1-220ENST00000626028 SEC23BQ15437 767 aa19.27■□□□□ 0.68
SF1-220ENST00000626028 UNQ6126/PRO20091Q6UXV3 157 aa19.27■□□□□ 0.68
SF1-220ENST00000626028 DPY19L2P2Q6ZN68 376 aa19.27■□□□□ 0.68
SF1-220ENST00000626028 MEX3DQ86XN8 651 aaKnown RBP19.27■□□□□ 0.68
SF1-220ENST00000626028 C1orf174Q8IYL3 243 aa19.27■□□□□ 0.68
SF1-220ENST00000626028 LRRC18Q8N456 261 aa19.27■□□□□ 0.68
SF1-220ENST00000626028 LINC00471Q8N535 108 aa19.27■□□□□ 0.68
SF1-220ENST00000626028 ZNF525Q8N782 197 aa19.27■□□□□ 0.68
SF1-220ENST00000626028 RSRC1Q96IZ7 334 aaKnown RBP19.27■□□□□ 0.68
SF1-220ENST00000626028 ZNF570Q96NI8 536 aa19.27■□□□□ 0.68
SF1-220ENST00000626028 VRK1Q99986 396 aaPredicted RBP19.27■□□□□ 0.68
SF1-220ENST00000626028 V9GYQ6 96 aa19.27■□□□□ 0.68
SF1-220ENST00000626028 FN1P02751 2386 aaKnown RBP19.26■□□□□ 0.67
SF1-220ENST00000626028 IGKV1D-43A0A0B4J1Z2 117 aa19.26■□□□□ 0.67
SF1-220ENST00000626028 PRSS37A4D1T9 235 aa19.26■□□□□ 0.67
SF1-220ENST00000626028 SYNGR3O43761 229 aa19.26■□□□□ 0.67
SF1-220ENST00000626028 DIRAS1O95057 198 aa19.26■□□□□ 0.67
SF1-220ENST00000626028 ZNF26P17031 533 aaPredicted RBP19.26■□□□□ 0.67
SF1-220ENST00000626028 CDAP32320 146 aa19.26■□□□□ 0.67
SF1-220ENST00000626028 RAD52P43351 418 aa19.26■□□□□ 0.67
SF1-220ENST00000626028 PDLIM4P50479 330 aa19.26■□□□□ 0.67
SF1-220ENST00000626028 HMGA2P52926 109 aa19.26■□□□□ 0.67
SF1-220ENST00000626028 SPIBQ01892 262 aa19.26■□□□□ 0.67
SF1-220ENST00000626028 HSF2Q03933 536 aa19.26■□□□□ 0.67
SF1-220ENST00000626028 LOXL1Q08397 574 aaPredicted RBP19.26■□□□□ 0.67
SF1-220ENST00000626028 TRIM25Q14258 630 aaKnown RBP19.26■□□□□ 0.67
SF1-220ENST00000626028 ZDHHC21Q8IVQ6 265 aa19.26■□□□□ 0.67
SF1-220ENST00000626028 ALDH16A1Q8IZ83 802 aa19.26■□□□□ 0.67
SF1-220ENST00000626028 SVOPLQ8N434 492 aa19.26■□□□□ 0.67
SF1-220ENST00000626028 OR52J3Q8NH60 311 aa19.26■□□□□ 0.67
SF1-220ENST00000626028 C10orf105Q8TEF2 133 aa19.26■□□□□ 0.67
SF1-220ENST00000626028 NSMAFQ92636 917 aa19.26■□□□□ 0.67
SF1-220ENST00000626028 POM121Q96HA1 1249 aa19.26■□□□□ 0.67
SF1-220ENST00000626028 BCL2L14Q9BZR8 327 aa19.26■□□□□ 0.67
SF1-220ENST00000626028 MS4A5Q9H3V2 200 aa19.26■□□□□ 0.67
SF1-220ENST00000626028 MAGIXQ9H6Y5 334 aa19.26■□□□□ 0.67
SF1-220ENST00000626028 CDH20Q9HBT6 801 aa19.26■□□□□ 0.67
SF1-220ENST00000626028 TMCC3Q9ULS5 477 aa19.26■□□□□ 0.67
SF1-220ENST00000626028 ADAM18Q9Y3Q7 739 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms