RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 SFT2D3Q587I9 215 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 KPRPQ5T749 579 aaPredicted RBP1.75□□□□□ -2.13
VBP1-204ENST00000625964 FBXW9Q5XUX1 488 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 ZNF880Q6PDB4 577 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 LINC00173Q6ZV60 143 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 PIANPQ8IYJ0 282 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 MREGQ8N565 214 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 SGK3Q96BR1 496 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 SMIM10Q96HG1 83 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 TTC25Q96NG3 672 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 RBM14Q96PK6 669 aaKnown RBP1.75□□□□□ -2.13
VBP1-204ENST00000625964 TSSK3Q96PN8 268 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 UGT1A7Q9HAW7 530 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 UGT1A10Q9HAW8 530 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 UGT1A8Q9HAW9 530 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 ADAP2Q9NPF8 381 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 AP1M2Q9Y6Q5 423 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 PCNTO95613 3336 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 ARHGEF5Q12774 1597 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 MN1Q10571 1320 aaPredicted RBP1.75□□□□□ -2.13
VBP1-204ENST00000625964 EIF2AK4Q9P2K8 1649 aaKnown RBP1.74□□□□□ -2.13
VBP1-204ENST00000625964 BCL9O00512 1426 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 EEA1Q15075 1411 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 CEP162Q5TB80 1403 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 TULP4Q9NRJ4 1543 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 TRAV40A0A0B4J280 105 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 ZNF705GA8MUZ8 300 aaPredicted RBP1.74□□□□□ -2.13
VBP1-204ENST00000625964 UPK3AO75631 287 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 VAMP5O95183 116 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 ADRA2AP08913 450 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 GPR6P46095 362 aaPredicted RBP1.74□□□□□ -2.13
VBP1-204ENST00000625964 DUSP3P51452 185 aaPredicted RBP1.74□□□□□ -2.13
VBP1-204ENST00000625964 RAP1AP62834 184 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 CDK16Q00536 496 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 SCRN3Q0VDG4 424 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 CHRFAM7AQ494W8 412 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 PDZK1Q5T2W1 519 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 OR4F3Q6IEY1 312 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 TRIM69Q86WT6 500 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 VSTM4Q8IW00 320 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 ZNF679Q8IYX0 411 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 OR10G4Q8NGN3 311 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 EMG1Q92979 244 aaKnown RBP1.74□□□□□ -2.13
VBP1-204ENST00000625964 RMI2Q96E14 147 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 RMND5AQ9H871 391 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 MCCC2Q9HCC0 563 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 POLE4Q9NR33 117 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 SNX6Q9UNH7 406 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 PLCH1Q4KWH8 1693 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 BRD4O60885 1362 aaPredicted RBP1.74□□□□□ -2.13
VBP1-204ENST00000625964 KIAA0232Q92628 1395 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 NRAPQ86VF7 1730 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 NALCNQ8IZF0 1738 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 LRRIQ1Q96JM4 1722 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 NAIPQ13075 1403 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 C10orf71Q711Q0 1435 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 SSH2Q76I76 1423 aa1.74□□□□□ -2.13
VBP1-204ENST00000625964 CDC42BPGQ6DT37 1551 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 IGKV1D-13A0A0B4J2D9 117 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 A0A1B0GVI7 797 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 ANGPT2O15123 496 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 KMOO15229 486 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 MGRN1O60291 552 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 NOL3O60936 208 aaKnown RBP1.73□□□□□ -2.13
VBP1-204ENST00000625964 CAPN1P07384 714 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 IGKV1-13P0DP09 117 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 TCN2P20062 427 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 OPRD1P41143 372 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 NPBWR2P48146 333 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 CCR8P51685 355 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 ATP1B3P54709 279 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 RPS21P63220 83 aaKnown RBP1.73□□□□□ -2.13
VBP1-204ENST00000625964 KLHL30Q0D2K2 578 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 COX19Q49B96 90 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 CCDC92Q53HC0 331 aaPredicted RBP1.73□□□□□ -2.13
VBP1-204ENST00000625964 VAX1Q5SQQ9 334 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 HES5Q5TA89 166 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 SHISA6Q6ZSJ9 500 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 NCCRP1Q6ZVX7 275 aaPredicted RBP1.73□□□□□ -2.13
VBP1-204ENST00000625964 STRADAQ7RTN6 431 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 UBALD2Q8IYN6 164 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 C15orf56Q8N910 161 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 ZNF461Q8TAF7 563 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 MAGEE2Q8TD90 523 aaPredicted RBP1.73□□□□□ -2.13
VBP1-204ENST00000625964 RLN3Q8WXF3 142 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.73□□□□□ -2.13
VBP1-204ENST00000625964 MED8Q96G25 268 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 OR10C1Q96KK4 312 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 WFIKKN1Q96NZ8 548 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 RPRD1AQ96P16 312 aaPredicted RBP1.73□□□□□ -2.13
VBP1-204ENST00000625964 MS4A4EQ96PG1 132 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 OSBPL10Q9BXB5 764 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 RPP21Q9H633 154 aaKnown RBP1.73□□□□□ -2.13
VBP1-204ENST00000625964 COL14A1Q05707 1796 aaKnown RBP1.73□□□□□ -2.13
VBP1-204ENST00000625964 CNTNAP1P78357 1384 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 PXDNLA1KZ92 1463 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 ATP7BP35670 1465 aa1.73□□□□□ -2.13
VBP1-204ENST00000625964 PHRF1Q9P1Y6 1649 aaKnown RBP1.73□□□□□ -2.13
VBP1-204ENST00000625964 ARHGEF28Q8N1W1 1705 aaKnown RBP1.72□□□□□ -2.13
VBP1-204ENST00000625964 RGPD3A6NKT7 1758 aaPredicted RBP1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms