RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 P2RY4P51582 365 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 CDH15P55291 814 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 CTXN1P60606 82 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 ERVK-25P63136 954 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 PMS2P3Q13401 168 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 TOP3AQ13472 1001 aaPredicted RBP11.1□□□□□ -0.63
PNKP-217ENST00000625216 APOFQ13790 326 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 MFSD13AQ14CX5 517 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 STK11Q15831 433 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 ZNF362Q5T0B9 420 aaPredicted RBP11.1□□□□□ -0.63
PNKP-217ENST00000625216 DPY19L2P2Q6ZN68 376 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 HIST3H2AQ7L7L0 130 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 BIVMQ86UB2 503 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 KRTAP1-3Q8IUG1 177 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 SCAIQ8N9R8 606 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 BPIFB6Q8NFQ5 453 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 HIST1H2ACQ93077 130 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 TMEM45BQ96B21 275 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 RASD2Q96D21 266 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 RADILQ96JH8 1075 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 C18orf12Q96KH6 178 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 ERMAPQ96PL5 475 aaPredicted RBP11.1□□□□□ -0.63
PNKP-217ENST00000625216 YTHDF1Q9BYJ9 559 aaKnown RBP11.1□□□□□ -0.63
PNKP-217ENST00000625216 CMC2Q9NRP2 79 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 ZNF701Q9NV72 531 aaPredicted RBP11.1□□□□□ -0.63
PNKP-217ENST00000625216 TAS2R16Q9NYV7 291 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 CORINQ9Y5Q5 1042 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 FLVCR1Q9Y5Y0 555 aa11.1□□□□□ -0.63
PNKP-217ENST00000625216 ZNF469Q96JG9 3925 aaPredicted RBP11.1□□□□□ -0.63
PNKP-217ENST00000625216 ROS1P08922 2347 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 ACANP16112 2415 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 TEX13CA0A0J9YWL9 993 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 DPRXA6NFQ7 191 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 AQP7P3A6NL99 342 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 MS4A18H0YCH9 400 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 ARPC3O15145 178 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 TLX2O43763 284 aaPredicted RBP11.09□□□□□ -0.63
PNKP-217ENST00000625216 RAMP1O60894 148 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 ENTPD6O75354 484 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 AKR7A3O95154 331 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 TXNDC12O95881 172 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 CCDC159P0C7I6 412 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 ADORA3P0DMS8 318 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 APEHP13798 732 aaKnown RBP11.09□□□□□ -0.63
PNKP-217ENST00000625216 HIST1H1CP16403 213 aaKnown RBP11.09□□□□□ -0.63
PNKP-217ENST00000625216 GTF2E2P29084 291 aaKnown RBP11.09□□□□□ -0.63
PNKP-217ENST00000625216 NTF4P34130 210 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 CXCR4P61073 352 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 TGFBR3Q03167 851 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 DBPQ10586 325 aaPredicted RBP11.09□□□□□ -0.63
PNKP-217ENST00000625216 CRMP1Q14194 572 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 OCLNQ16625 522 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 MS4A18Q3C1V0 323 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 Q5PR19 223 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 AADACL4Q5VUY2 407 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 TMEM225Q6GV28 225 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 SEZ6L2Q6UXD5 910 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 ADPRHL1Q8NDY3 354 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 SDR9C7Q8NEX9 313 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 BBS1Q8NFJ9 593 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 TRUB1Q8WWH5 349 aaKnown RBP11.09□□□□□ -0.63
PNKP-217ENST00000625216 FBXW5Q969U6 566 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 PLEKHA8Q96JA3 519 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 Q96M85 177 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 ZNF582Q96NG8 517 aaPredicted RBP11.09□□□□□ -0.63
PNKP-217ENST00000625216 TSPAN32Q96QS1 320 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 HCAR1Q9BXC0 346 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 FN3KQ9H479 309 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 MED20Q9H944 212 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 INIPQ9NRY2 104 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 CLN6Q9NWW5 311 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 UPB1Q9UBR1 384 aa11.09□□□□□ -0.63
PNKP-217ENST00000625216 VPS13CQ709C8 3753 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 OR6C65A6NJZ3 312 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 FAM183AA6NL82 134 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 FAM171A2A8MVW0 826 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 IMPA2O14732 288 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 SERPINI2O75830 405 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 IGHV3-9P01782 118 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 IGHMP01871 453 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 HTR1AP08908 422 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 HLA-DOBP13765 273 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 NOS3P29474 1203 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 GABARAPL2P60520 117 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 ZNF91Q05481 1191 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 PIGFQ07326 219 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 BSPH1Q075Z2 132 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.08□□□□□ -0.64
PNKP-217ENST00000625216 PUDPQ08623 228 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 ZP4Q12836 540 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 FAPQ12884 760 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 KRR1Q13601 381 aaKnown RBP11.08□□□□□ -0.64
PNKP-217ENST00000625216 GABRA6Q16445 453 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 ZNF672Q499Z4 452 aaPredicted RBP11.08□□□□□ -0.64
PNKP-217ENST00000625216 MESTQ5EB52 335 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 SLC25A30Q5SVS4 291 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 TMEM108Q6UXF1 575 aa11.08□□□□□ -0.64
PNKP-217ENST00000625216 H1FNTQ75WM6 255 aaPredicted RBP11.08□□□□□ -0.64
PNKP-217ENST00000625216 CXXC5Q7LFL8 322 aaKnown RBP11.08□□□□□ -0.64
PNKP-217ENST00000625216 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms