RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 ZNF454Q8N9F8 522 aa7.49□□□□□ -1.21
SND1-IT1-201ENST00000623342 OR8K3Q8NH51 312 aa7.49□□□□□ -1.21
SND1-IT1-201ENST00000623342 NUBPLQ8TB37 319 aa7.49□□□□□ -1.21
SND1-IT1-201ENST00000623342 DACT3Q96B18 629 aaPredicted RBP7.49□□□□□ -1.21
SND1-IT1-201ENST00000623342 CLDN23Q96B33 292 aa7.49□□□□□ -1.21
SND1-IT1-201ENST00000623342 KLK11Q9UBX7 282 aa7.49□□□□□ -1.21
SND1-IT1-201ENST00000623342 ATXN7L1Q9ULK2 861 aaPredicted RBP7.49□□□□□ -1.21
SND1-IT1-201ENST00000623342 PRRC2CQ9Y520 2896 aaKnown RBP7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 CPAMD8Q8IZJ3 1885 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 GPR179Q6PRD1 2367 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 TMEM265A0A087WTH1 108 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 A6NIZ1 184 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 H3BSH0 61 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 SSNA1O43805 119 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 ALOX12BO75342 701 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 GLSO94925 669 aaPredicted RBP7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 SULT1A3P0DMM9 295 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 SULT1A4P0DMN0 295 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 PNLIPP16233 465 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 CXCL3P19876 107 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 CSRP1P21291 193 aaKnown RBP7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 CFPP27918 469 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 APOBEC1P41238 236 aaKnown RBP7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 RIDAP52758 137 aaKnown RBP7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 SUMO3P55854 103 aaPredicted RBP7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 RAP1BP61224 184 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 RAP1AP62834 184 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 GLO1Q04760 184 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 PUDPQ08623 228 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 ZP4Q12836 540 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 EIF2B1Q14232 305 aaKnown RBP7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 MFSD13AQ14CX5 517 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 NKAIN1Q4KMZ8 207 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 TMEM255AQ5JRV8 349 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 OLFML2AQ68BL7 652 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 SLC38A9Q8NBW4 561 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 BEST4Q8NFU0 473 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 OR11G2Q8NGC1 345 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 THAP3Q8WTV1 239 aaPredicted RBP7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 RELTQ969Z4 430 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 NXPE2Q96DL1 559 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 ZFP64Q9NPA5 681 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 NKIRAS2Q9NYR9 191 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 PTTG3PQ9NZH4 202 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 SUSD2Q9UGT4 822 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 GTF2A1LQ9UNN4 478 aa7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 SPENQ96T58 3664 aaKnown RBP7.48□□□□□ -1.21
SND1-IT1-201ENST00000623342 MEIKINA0A087WXM9 373 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 A0A1B0GVI7 797 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 ANKRD34BA5PLL1 514 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 C2orf72A6NCS6 295 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 H0YC42 278 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 MS4A18H0YCH9 400 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 XRCC3O43542 346 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 ZNF354AO60765 605 aaPredicted RBP7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 PRAF2O60831 178 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 PNPP00491 289 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 TMIGD3P0DMS9 266 aaPredicted RBP7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 HLA-DOBP13765 273 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 IL11P20809 199 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 CCKBRP32239 447 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 GALK2Q01415 458 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 SQSTM1Q13501 440 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 MS4A18Q3C1V0 323 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 DNM1P46Q6ZS02 220 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 ZNF767PQ75MW2 155 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 KDM8Q8N371 416 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 MFSD8Q8NHS3 518 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 ZNF431Q8TF32 576 aaPredicted RBP7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 HGDQ93099 445 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 HLA-CQ95604 372 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 OR6C1Q96RD1 312 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 MESP1Q9BRJ9 268 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 ABHD6Q9BV23 337 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 DUSP23Q9BVJ7 150 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 PPIEQ9UNP9 301 aaKnown RBP7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 SLC22A13Q9Y226 551 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 COA3Q9Y2R0 106 aaPredicted RBP7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 PCNX3Q9H6A9 2034 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 CPED1A4D0V7 1026 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 TTLL8A6PVC2 850 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 NPIPA5E9PKD4 350 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 SCRG1O75711 98 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 ALX3O95076 343 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 TIAF1O95411 115 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 TGM6O95932 706 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 SYPP08247 313 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 PTHLHP12272 177 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 NAGAP17050 411 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 SDHBP21912 280 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 DAP3P51398 398 aaKnown RBP7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 DLX5P56178 289 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 DCDP81605 110 aaKnown RBP7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 PLA2G7Q13093 441 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 NR0B2Q15466 257 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 OR7A5Q15622 319 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 OR7E24Q6IFN5 339 aa7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 PAPD4Q6PIY7 484 aaKnown RBP7.47□□□□□ -1.21
SND1-IT1-201ENST00000623342 DNM1P34Q6PK57 102 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms