RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 SLC25A53Q5H9E4 307 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 ABHD17BQ5VST6 288 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 TMPPEQ6ZT21 453 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 GPALPP1Q8IXQ4 340 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 UBE2J2Q8N2K1 259 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 KDF1Q8NAX2 398 aaPredicted RBP6.95□□□□□ -1.3
NEK3-207ENST00000617054 ROBO4Q8WZ75 1007 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 GPR87Q9BY21 358 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 SRXN1Q9BYN0 137 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 RNF32Q9H0A6 362 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 MIXL1Q9H2W2 232 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 TIGARQ9NQ88 270 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 INPP5EQ9NRR6 644 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 ALKBH4Q9NXW9 302 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 DAPK2Q9UIK4 370 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 MOKQ9UQ07 419 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 SLC22A13Q9Y226 551 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 HTR3EA5X5Y0 456 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 LRRC3CA6NJW4 275 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 ETV2O00321 342 aaPredicted RBP6.95□□□□□ -1.3
NEK3-207ENST00000617054 UPK3AO75631 287 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 PNPP00491 289 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 IL1AP01583 271 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 ZNF43P17038 809 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 CLDN17P56750 224 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 EIF2B1Q14232 305 aaKnown RBP6.95□□□□□ -1.3
NEK3-207ENST00000617054 RSPO4Q2I0M5 234 aaPredicted RBP6.95□□□□□ -1.3
NEK3-207ENST00000617054 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.95□□□□□ -1.3
NEK3-207ENST00000617054 H3F3CQ6NXT2 135 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 ANKRD11Q6UB99 2663 aaPredicted RBP6.95□□□□□ -1.3
NEK3-207ENST00000617054 PXKQ7Z7A4 578 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 UEVLDQ8IX04 471 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 FNDC8Q8TC99 324 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 RGP1Q92546 391 aaPredicted RBP6.95□□□□□ -1.3
NEK3-207ENST00000617054 SMIM19Q96E16 107 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 SGCZQ96LD1 299 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 POTEKPQ9BYX7 375 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 ELOVL3Q9HB03 270 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 EMC7Q9NPA0 242 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 CENPMQ9NSP4 180 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 SACM1LQ9NTJ5 587 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 B3GALT5Q9Y2C3 310 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 AK6Q9Y3D8 172 aaKnown RBP6.95□□□□□ -1.3
NEK3-207ENST00000617054 RP1L1Q8IWN7 2480 aaPredicted RBP6.95□□□□□ -1.3
NEK3-207ENST00000617054 A0A1W2PPL8 197 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 C21orf140B9A014 251 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 LOC110117498-PIK3R3F6TDL0 507 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 ITGB2P05107 769 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 ACTA2P62736 377 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 ACTG2P63267 376 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 SELENBP1Q13228 472 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 ZNF684Q5T5D7 378 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 TUBA3EQ6PEY2 450 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 DCXRQ7Z4W1 244 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 PRSS35Q8N3Z0 413 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 GTPBP8Q8N3Z3 284 aaPredicted RBP6.95□□□□□ -1.3
NEK3-207ENST00000617054 CLEC1AQ8NC01 280 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 OTOSQ8NHW6 89 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 DIRAS2Q96HU8 199 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 ZNF845Q96IR2 970 aaPredicted RBP6.95□□□□□ -1.3
NEK3-207ENST00000617054 SDHCQ99643 169 aaPredicted RBP6.95□□□□□ -1.3
NEK3-207ENST00000617054 VSX1Q9NZR4 365 aaPredicted RBP6.95□□□□□ -1.3
NEK3-207ENST00000617054 FKBP7Q9Y680 259 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 FREM1Q5H8C1 2179 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 A0A1W2PQ72 361 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.94□□□□□ -1.3
NEK3-207ENST00000617054 KRT8P05787 483 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 CD63P08962 238 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 RBMS1P29558 406 aaKnown RBP6.94□□□□□ -1.3
NEK3-207ENST00000617054 CD40LGP29965 261 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 NTF4P34130 210 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 EIF1P41567 113 aaKnown RBP6.94□□□□□ -1.3
NEK3-207ENST00000617054 NOVA1P51513 510 aaKnown RBP6.94□□□□□ -1.3
NEK3-207ENST00000617054 CLRN1P58418 232 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 GLO1Q04760 184 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 OR1C1Q15619 314 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 SPANXN2Q5MJ10 180 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 PHYHD1Q5SRE7 291 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 STEAP3Q658P3 488 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 GALNTL5Q7Z4T8 443 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 SULF2Q8IWU5 870 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 OR8H2Q8N162 312 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 CENPSQ8N2Z9 138 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 ZNF433Q8N7K0 673 aaPredicted RBP6.94□□□□□ -1.3
NEK3-207ENST00000617054 S100ZQ8WXG8 99 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 ZBTB8AQ96BR9 441 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 ZNF837Q96EG3 531 aaPredicted RBP6.94□□□□□ -1.3
NEK3-207ENST00000617054 KLHL15Q96M94 604 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 ATF6BQ99941 703 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 ABHD6Q9BV23 337 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 WDR12Q9GZL7 423 aaKnown RBP6.94□□□□□ -1.3
NEK3-207ENST00000617054 NOX4Q9NPH5 578 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 PEX16Q9Y5Y5 336 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 NCOA6Q14686 2063 aaPredicted RBP6.94□□□□□ -1.3
NEK3-207ENST00000617054 PIN1P1O15428 100 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 OGG1O15527 345 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 TRAF3IP2O43734 574 aaPredicted RBP6.94□□□□□ -1.3
NEK3-207ENST00000617054 SSX4O60224 188 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 WISP2O76076 250 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 SPINK2P20155 84 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms