RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 ZNF628Q5EBL2 1059 aa8.01□□□□□ -1.13
VPS11-206ENST00000614944 SFRP5Q5T4F7 317 aa8.01□□□□□ -1.13
VPS11-206ENST00000614944 CDCP2Q5VXM1 449 aa8.01□□□□□ -1.13
VPS11-206ENST00000614944 CMIPQ8IY22 773 aa8.01□□□□□ -1.13
VPS11-206ENST00000614944 OR10K1Q8NGX5 313 aa8.01□□□□□ -1.13
VPS11-206ENST00000614944 CNOT9Q92600 299 aaKnown RBP8.01□□□□□ -1.13
VPS11-206ENST00000614944 ANKRD9Q96BM1 317 aaPredicted RBP8.01□□□□□ -1.13
VPS11-206ENST00000614944 SMAD5Q99717 465 aaKnown RBP8.01□□□□□ -1.13
VPS11-206ENST00000614944 SLC38A1Q9H2H9 487 aa8.01□□□□□ -1.13
VPS11-206ENST00000614944 SMCO4Q9NRQ5 59 aa8.01□□□□□ -1.13
VPS11-206ENST00000614944 CUTCQ9NTM9 273 aa8.01□□□□□ -1.13
VPS11-206ENST00000614944 GPATCH2Q9NW75 528 aa8.01□□□□□ -1.13
VPS11-206ENST00000614944 CHRNA9Q9UGM1 479 aa8.01□□□□□ -1.13
VPS11-206ENST00000614944 MRPS2Q9Y399 296 aaKnown RBP8.01□□□□□ -1.13
VPS11-206ENST00000614944 C5orf58C9J3I9 102 aa8□□□□□ -1.13
VPS11-206ENST00000614944 BLOC1S5-TXNDC5H3BN57 136 aa8□□□□□ -1.13
VPS11-206ENST00000614944 GTPBP1O00178 669 aaKnown RBP8□□□□□ -1.13
VPS11-206ENST00000614944 PRSS23O95084 383 aa8□□□□□ -1.13
VPS11-206ENST00000614944 ZNF35P13682 527 aa8□□□□□ -1.13
VPS11-206ENST00000614944 CD59P13987 128 aa8□□□□□ -1.13
VPS11-206ENST00000614944 TUBG1P23258 451 aa8□□□□□ -1.13
VPS11-206ENST00000614944 OR4D2P58180 307 aa8□□□□□ -1.13
VPS11-206ENST00000614944 MTPNP58546 118 aa8□□□□□ -1.13
VPS11-206ENST00000614944 PRR5P85299 388 aa8□□□□□ -1.13
VPS11-206ENST00000614944 LASP1Q14847 261 aaKnown RBP8□□□□□ -1.13
VPS11-206ENST00000614944 SLC9A3R2Q15599 337 aa8□□□□□ -1.13
VPS11-206ENST00000614944 GCNT6Q5T4J0 391 aa8□□□□□ -1.13
VPS11-206ENST00000614944 ZNF621Q6ZSS3 439 aa8□□□□□ -1.13
VPS11-206ENST00000614944 DTWD1Q8N5C7 304 aa8□□□□□ -1.13
VPS11-206ENST00000614944 OR4C15Q8NGM1 316 aa8□□□□□ -1.13
VPS11-206ENST00000614944 RNF2Q99496 336 aa8□□□□□ -1.13
VPS11-206ENST00000614944 VPS25Q9BRG1 176 aa8□□□□□ -1.13
VPS11-206ENST00000614944 THUMPD3Q9BV44 507 aaKnown RBP8□□□□□ -1.13
VPS11-206ENST00000614944 PIGMQ9H3S5 423 aa8□□□□□ -1.13
VPS11-206ENST00000614944 TUBG2Q9NRH3 451 aa8□□□□□ -1.13
VPS11-206ENST00000614944 SAMD4AQ9UPU9 718 aaKnown RBP8□□□□□ -1.13
VPS11-206ENST00000614944 A0A1B0GX78 115 aa8□□□□□ -1.13
VPS11-206ENST00000614944 PATE3B3GLJ2 98 aa8□□□□□ -1.13
VPS11-206ENST00000614944 PROB1E7EW31 1015 aa8□□□□□ -1.13
VPS11-206ENST00000614944 UPK1AO00322 258 aa8□□□□□ -1.13
VPS11-206ENST00000614944 CXCR6O00574 342 aa8□□□□□ -1.13
VPS11-206ENST00000614944 CCSO14618 274 aa8□□□□□ -1.13
VPS11-206ENST00000614944 CDX4O14627 284 aaPredicted RBP8□□□□□ -1.13
VPS11-206ENST00000614944 HCRTR1O43613 425 aa8□□□□□ -1.13
VPS11-206ENST00000614944 GBAP04062 536 aa8□□□□□ -1.13
VPS11-206ENST00000614944 DAOP14920 347 aa8□□□□□ -1.13
VPS11-206ENST00000614944 NPBWR1P48145 328 aa8□□□□□ -1.13
VPS11-206ENST00000614944 SRP9P49458 86 aaKnown RBP8□□□□□ -1.13
VPS11-206ENST00000614944 KHKP50053 298 aa8□□□□□ -1.13
VPS11-206ENST00000614944 CEBPGP53567 150 aa8□□□□□ -1.13
VPS11-206ENST00000614944 CDH11P55287 796 aa8□□□□□ -1.13
VPS11-206ENST00000614944 HLXQ14774 488 aaPredicted RBP8□□□□□ -1.13
VPS11-206ENST00000614944 TSTQ16762 297 aaKnown RBP8□□□□□ -1.13
VPS11-206ENST00000614944 DEFB134Q4QY38 66 aa8□□□□□ -1.13
VPS11-206ENST00000614944 NKAIN2Q5VXU1 208 aa8□□□□□ -1.13
VPS11-206ENST00000614944 Q8N402 240 aa8□□□□□ -1.13
VPS11-206ENST00000614944 OR10D4PQ8NGN7 298 aa8□□□□□ -1.13
VPS11-206ENST00000614944 OR10A6Q8NH74 314 aa8□□□□□ -1.13
VPS11-206ENST00000614944 OR1L3Q8NH93 324 aa8□□□□□ -1.13
VPS11-206ENST00000614944 NUDT8Q8WV74 236 aa8□□□□□ -1.13
VPS11-206ENST00000614944 WFIKKN1Q96NZ8 548 aa8□□□□□ -1.13
VPS11-206ENST00000614944 STACQ99469 402 aa8□□□□□ -1.13
VPS11-206ENST00000614944 RHNO1Q9BSD3 238 aa8□□□□□ -1.13
VPS11-206ENST00000614944 IL1RL2Q9HB29 575 aa8□□□□□ -1.13
VPS11-206ENST00000614944 SOHLH2Q9NX45 425 aa8□□□□□ -1.13
VPS11-206ENST00000614944 IGKV3D-11A0A0A0MRZ8 115 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 MT-ND4LP03901 98 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 SSTR4P31391 388 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 LIMS1P48059 325 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 ARL4DP49703 201 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 AP3S2P59780 193 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 CHRNB3Q05901 458 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.99□□□□□ -1.13
VPS11-206ENST00000614944 DUSP8Q13202 625 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 TBCEQ15813 527 aaPredicted RBP7.99□□□□□ -1.13
VPS11-206ENST00000614944 C18orf63Q68DL7 685 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 WDR88Q6ZMY6 472 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 CBLL1Q75N03 491 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 PIP4P1Q86T03 277 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 BMPERQ8N8U9 685 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 C14orf79Q96F83 325 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 ZNF430Q9H8G1 570 aaPredicted RBP7.99□□□□□ -1.13
VPS11-206ENST00000614944 MKKSQ9NPJ1 570 aaPredicted RBP7.99□□□□□ -1.13
VPS11-206ENST00000614944 FTSJ1Q9UET6 329 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 ZNF223Q9UK11 482 aaPredicted RBP7.99□□□□□ -1.13
VPS11-206ENST00000614944 MAP4K5Q9Y4K4 846 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 DSPPQ9NZW4 1301 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 TGOLN2O43493 480 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 OR2T1O43869 369 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 FMO6PO60774 539 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 CPSF4O95639 269 aaKnown RBP7.99□□□□□ -1.13
VPS11-206ENST00000614944 ALDOBP05062 364 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 F13BP05160 661 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 CXCL2P19875 107 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 EFNA1P20827 205 aaPredicted RBP7.99□□□□□ -1.13
VPS11-206ENST00000614944 NCBP2P52298 156 aaKnown RBP eCLIP7.99□□□□□ -1.13
VPS11-206ENST00000614944 UBE2G2P60604 165 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 MGAT2Q10469 447 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 PRICKLE4Q2TBC4 344 aa7.99□□□□□ -1.13
VPS11-206ENST00000614944 PLPP5Q8NEB5 264 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms