RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 A6NIN4 97 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 DVL2O14641 736 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 B3GALT4O96024 378 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 SOD1P00441 154 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 FASLGP48023 281 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 AKR1C2P52895 323 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 RAB4BP61018 213 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 RPP30P78346 268 aaKnown RBP13.47□□□□□ -0.25
SNPH-203ENST00000614659 FAM53BQ14153 422 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 TRMT12Q53H54 448 aaKnown RBP13.47□□□□□ -0.25
SNPH-203ENST00000614659 DPY19L4Q7Z388 723 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 LIN37Q96GY3 246 aaPredicted RBP13.47□□□□□ -0.25
SNPH-203ENST00000614659 SENP5Q96HI0 755 aaPredicted RBP13.47□□□□□ -0.25
SNPH-203ENST00000614659 LOXL4Q96JB6 756 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 SLC38A1Q9H2H9 487 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 C1orf123Q9NWV4 160 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 B3GNT2Q9NY97 397 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 ZNF223Q9UK11 482 aaPredicted RBP13.47□□□□□ -0.25
SNPH-203ENST00000614659 SBF2Q86WG5 1849 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 ZNF587BE7ETH6 402 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 GPR137BO60478 399 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 RAE1P78406 368 aaKnown RBP13.47□□□□□ -0.25
SNPH-203ENST00000614659 DEFA6Q01524 100 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 TAGLNQ01995 201 aaKnown RBP13.47□□□□□ -0.25
SNPH-203ENST00000614659 AQP6Q13520 282 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 SSX2Q16385 188 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 ZNF628Q5EBL2 1059 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 CPEB2Q7Z5Q1 589 aaKnown RBP13.47□□□□□ -0.25
SNPH-203ENST00000614659 MSRB3Q8IXL7 192 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 CPEB3Q8NE35 698 aaKnown RBP13.47□□□□□ -0.25
SNPH-203ENST00000614659 OR56B2PQ8NGI1 322 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 DUSP19Q8WTR2 217 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 RBBP6Q7Z6E9 1792 aaKnown RBP13.47□□□□□ -0.25
SNPH-203ENST00000614659 CHRM2P08172 466 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 CD22P20273 847 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 PPICP45877 212 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 WNT3P56703 355 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 NKG7Q16617 165 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 GDPD3Q7L5L3 318 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 ZNF679Q8IYX0 411 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 BCORP1Q8N888 145 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 RAB3CQ96E17 227 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 RBM38Q9H0Z9 239 aaKnown RBP13.47□□□□□ -0.25
SNPH-203ENST00000614659 OR52A1Q9UKL2 312 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 RHBDD3Q9Y3P4 386 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 GIPP09681 153 aaPredicted RBP13.47□□□□□ -0.25
SNPH-203ENST00000614659 MAKP20794 623 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 KIR2DL3P43628 341 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 CX3CR1P49238 355 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 H1FNTQ75WM6 255 aaPredicted RBP13.47□□□□□ -0.25
SNPH-203ENST00000614659 TMEM99Q8N816 258 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 OR2A1Q8NGT9 310 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 SGCZQ96LD1 299 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 ZNF416Q9BWM5 594 aa13.47□□□□□ -0.25
SNPH-203ENST00000614659 MRPS28Q9Y2Q9 187 aaKnown RBP13.47□□□□□ -0.25
SNPH-203ENST00000614659 SELENOFO60613 162 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 SFTPCP11686 197 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 CD82P27701 267 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 DEFB109BQ30KR1 87 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 CD300LDQ6UXZ3 194 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 FAM57BQ71RH2 274 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 SLC16A14Q7RTX9 510 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 TOMM40LQ969M1 308 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 BOD1Q96IK1 185 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 MEIS3P1A6NDR6 274 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 CYB5BO43169 146 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 RPL23AP62750 156 aaKnown RBP13.46□□□□□ -0.25
SNPH-203ENST00000614659 HMGN3Q15651 99 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 SLC35D2Q76EJ3 337 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 SLC51BQ86UW2 128 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 RSPRY1Q96DX4 576 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 ARPC5LQ9BPX5 153 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 UQCC2Q9BRT2 126 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 EHFQ9NZC4 300 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 MYEF2Q9P2K5 600 aaKnown RBP13.46□□□□□ -0.25
SNPH-203ENST00000614659 A0A1W2PS29 197 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 POM121CA8CG34 1229 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 UPK1AO00322 258 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 PDGFAP04085 211 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 ELK1P19419 428 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 ZNF133P52736 654 aaPredicted RBP13.46□□□□□ -0.25
SNPH-203ENST00000614659 HMGA2P52926 109 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 SSBP1Q04837 148 aaKnown RBP13.46□□□□□ -0.25
SNPH-203ENST00000614659 TRIP6Q15654 476 aaKnown RBP13.46□□□□□ -0.25
SNPH-203ENST00000614659 MEP1BQ16820 701 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 SLC22A6Q4U2R8 563 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 PLCXD3Q63HM9 321 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 XAF1Q6GPH4 301 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 RASD2Q96D21 266 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 POMT2Q9UKY4 750 aa13.46□□□□□ -0.25
SNPH-203ENST00000614659 NRXN2Q9P2S2 1712 aa13.46□□□□□ -0.26
SNPH-203ENST00000614659 TRAV1-2A0A0B4J238 106 aa13.46□□□□□ -0.26
SNPH-203ENST00000614659 IDSB3KWA1 339 aa13.46□□□□□ -0.26
SNPH-203ENST00000614659 FGF17O60258 216 aa13.46□□□□□ -0.26
SNPH-203ENST00000614659 CEACAM5P06731 702 aa13.46□□□□□ -0.26
SNPH-203ENST00000614659 EVX1P49640 407 aa13.46□□□□□ -0.26
SNPH-203ENST00000614659 CLDN20P56880 219 aa13.46□□□□□ -0.26
SNPH-203ENST00000614659 ZXDAP98168 799 aa13.46□□□□□ -0.26
SNPH-203ENST00000614659 SORDQ00796 357 aa13.46□□□□□ -0.26
SNPH-203ENST00000614659 Q7L0L9 218 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms