RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 CANT1Q8WVQ1 401 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 ZG16BQ96DA0 208 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 ELOVL1Q9BW60 279 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 BARHL1Q9BZE3 327 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 MED28Q9H204 178 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 C6orf50Q9HD87 102 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 NDRG4Q9ULP0 352 aaKnown RBP4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 FBXO7Q9Y3I1 522 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 CACNA1SQ13698 1873 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 A0A087X0K7 114 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 DHRS12A0PJE2 317 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 CDHR4A6H8M9 788 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 HHLA1C9JL84 531 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 FGF10O15520 208 aaPredicted RBP4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 TGOLN2O43493 480 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 CDC14BO60729 498 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 TRIM13O60858 407 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 HPP00738 406 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 HAPLN1P10915 354 aaPredicted RBP4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 IDSP22304 550 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 STOMP27105 288 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 CDH11P55287 796 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 ARF6P62330 175 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 AESQ08117 197 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 SURF2Q15527 256 aaPredicted RBP4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 SAMD4BQ5PRF9 694 aaKnown RBP4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 C10orf91Q5T1B1 145 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 ZNF770Q6IQ21 691 aaPredicted RBP4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 EPGNQ6UW88 154 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 LRRN1Q6UXK5 716 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 CEACAM20Q6UY09 585 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 GPC2Q8N158 579 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 ZNF655Q8N720 491 aaPredicted RBP4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 HSD17B11Q8NBQ5 300 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 OR52E5Q8NH55 327 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 SLC35B2Q8TB61 432 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 EXTL1Q92935 676 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 UCN3Q969E3 161 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 TADA1Q96BN2 335 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 COQ2Q96H96 371 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 ZNF354BQ96LW1 612 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 ZNF426Q9BUY5 554 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 ALG8Q9BVK2 526 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 GALNT9Q9HCQ5 603 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 TMEM138Q9NPI0 162 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 PLEKHJ1Q9NW61 149 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 SIDT1Q9NXL6 827 aaKnown RBP4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 GSKIPQ9P0R6 139 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 MYOTQ9UBF9 498 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 MUTYHQ9UIF7 546 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 FBXO4Q9UKT5 387 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 C14orf166Q9Y224 244 aaKnown RBP4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 CARHSP1Q9Y2V2 147 aaKnown RBP4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 COLCA2A8K830 154 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 CXCR6O00574 342 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 CASKO14936 926 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 SLC19A2O60779 497 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 NDUFB10O96000 172 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 RPLP0P05388 317 aaKnown RBP4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 CD2P06729 351 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 BMP7P18075 431 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 CD82P27701 267 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 HTR2AP28223 471 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 HOXC5Q00444 222 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 RSU1Q15404 277 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 EFNB3Q15768 340 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 OTUD1Q5VV17 481 aaPredicted RBP4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 ACSM6Q6P461 480 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 TMPRSS11AQ6ZMR5 421 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 ZNF621Q6ZSS3 439 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 SSX6Q7RTT6 188 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 SLC26A11Q86WA9 606 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 GALNT16Q8N428 558 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 ZNF555Q8NEP9 628 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 NUP43Q8NFH3 380 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 TBCKQ8TEA7 893 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 LINC01599Q8WXQ3 324 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 RAB34Q9BZG1 259 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 SLITRK2Q9H156 845 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 DUSP21Q9H596 190 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 RHOFQ9HBH0 211 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 KRCC1Q9NPI7 259 aaPredicted RBP4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 STOX2Q9P2F5 926 aaPredicted RBP4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 TPRKBQ9Y3C4 175 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 YIPF1Q9Y548 306 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 MTCL1Q9Y4B5 1905 aaKnown RBP4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 ASTN1O14525 1302 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 A0A1W2PR48 441 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 C7orf66A4D0T2 115 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 GPR31O00270 319 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 IMPA2O14732 288 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 PLA2G10O15496 165 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 SLC37A4O43826 429 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 FCN3O75636 299 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 SERPINE1P05121 402 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 SERPIND1P05546 499 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 HOXB5P09067 269 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 SNRPCP09234 159 aaKnown RBP4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 CSF3P09919 207 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 CT62P0C5K7 136 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms