RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 FUZQ9BT04 418 aa16.82■□□□□ 0.28
UPF1-212ENST00000601689 NRIP3Q9NQ35 241 aa16.82■□□□□ 0.28
UPF1-212ENST00000601689 CA10Q9NS85 328 aa16.82■□□□□ 0.28
UPF1-212ENST00000601689 IER3IP1Q9Y5U9 82 aa16.82■□□□□ 0.28
UPF1-212ENST00000601689 LYVE1Q9Y5Y7 322 aa16.82■□□□□ 0.28
UPF1-212ENST00000601689 AKAP9Q99996 3911 aa16.81■□□□□ 0.28
UPF1-212ENST00000601689 A0A1W2PPL8 197 aa16.81■□□□□ 0.28
UPF1-212ENST00000601689 IMPA2O14732 288 aa16.81■□□□□ 0.28
UPF1-212ENST00000601689 ACOT8O14734 319 aa16.81■□□□□ 0.28
UPF1-212ENST00000601689 ARHGDIAP52565 204 aa16.81■□□□□ 0.28
UPF1-212ENST00000601689 RPS23P62266 143 aaKnown RBP16.81■□□□□ 0.28
UPF1-212ENST00000601689 DAG1Q14118 895 aa16.81■□□□□ 0.28
UPF1-212ENST00000601689 RAB35Q15286 201 aa16.81■□□□□ 0.28
UPF1-212ENST00000601689 SLC25A47Q6Q0C1 308 aa16.81■□□□□ 0.28
UPF1-212ENST00000601689 ERMAPQ96PL5 475 aaPredicted RBP16.81■□□□□ 0.28
UPF1-212ENST00000601689 WACQ9BTA9 647 aa16.81■□□□□ 0.28
UPF1-212ENST00000601689 BDH2Q9BUT1 245 aa16.81■□□□□ 0.28
UPF1-212ENST00000601689 IFT27Q9BW83 186 aa16.81■□□□□ 0.28
UPF1-212ENST00000601689 CHID1Q9BWS9 393 aa16.81■□□□□ 0.28
UPF1-212ENST00000601689 OR52D1Q9H346 318 aa16.81■□□□□ 0.28
UPF1-212ENST00000601689 CDH20Q9HBT6 801 aa16.81■□□□□ 0.28
UPF1-212ENST00000601689 ADAM18Q9Y3Q7 739 aa16.81■□□□□ 0.28
UPF1-212ENST00000601689 IGHV2OR16-5A0A0B4J2B6 119 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 TEX13CA0A0J9YWL9 993 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 PRSS37A4D1T9 235 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 OVOL3O00110 214 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 SOCS2O14508 198 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 GSC2O15499 205 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 IDH3BO43837 385 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 RENP00797 406 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 ERCC1P07992 297 aaPredicted RBP16.8■□□□□ 0.28
UPF1-212ENST00000601689 CELA3BP08861 270 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 GSTM3P21266 225 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 CRABP1P29762 137 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 APLNRP35414 380 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 SERPINF1P36955 418 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 CDKN1AP38936 164 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 FMODQ06828 376 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 FHL1Q13642 323 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 RAB39AQ14964 217 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 TBC1D28Q2M2D7 210 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 PGM2L1Q6PCE3 622 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 FAM122BQ7Z309 247 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 IGFBPL1Q8WX77 278 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 CACNG6Q9BXT2 260 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 ZNF442Q9H7R0 627 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 IL20RAQ9UHF4 553 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 SLC7A8Q9UHI5 535 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 USF3Q68DE3 2245 aa16.8■□□□□ 0.28
UPF1-212ENST00000601689 OTOGQ6ZRI0 2925 aa16.79■□□□□ 0.28
UPF1-212ENST00000601689 C12orf71A8MTZ7 269 aa16.79■□□□□ 0.28
UPF1-212ENST00000601689 B9A039 149 aa16.79■□□□□ 0.28
UPF1-212ENST00000601689 KHDRBS3O75525 346 aaKnown RBP16.79■□□□□ 0.28
UPF1-212ENST00000601689 ZNF14P17017 642 aaPredicted RBP16.79■□□□□ 0.28
UPF1-212ENST00000601689 MSR1P21757 451 aa16.79■□□□□ 0.28
UPF1-212ENST00000601689 GSSP48637 474 aa16.79■□□□□ 0.28
UPF1-212ENST00000601689 SELENOVP59797 346 aa16.79■□□□□ 0.28
UPF1-212ENST00000601689 SNTB2Q13425 540 aaKnown RBP16.79■□□□□ 0.28
UPF1-212ENST00000601689 MICAQ29983 383 aa16.79■□□□□ 0.28
UPF1-212ENST00000601689 FAM27BQ5VT28 67 aa16.79■□□□□ 0.28
UPF1-212ENST00000601689 PGBD2Q6P3X8 592 aa16.79■□□□□ 0.28
UPF1-212ENST00000601689 B3GLCTQ6Y288 498 aa16.79■□□□□ 0.28
UPF1-212ENST00000601689 CANT1Q8WVQ1 401 aa16.79■□□□□ 0.28
UPF1-212ENST00000601689 FBXO17Q96EF6 278 aa16.79■□□□□ 0.28
UPF1-212ENST00000601689 RERGLQ9H628 205 aa16.79■□□□□ 0.28
UPF1-212ENST00000601689 NOX3Q9HBY0 568 aa16.79■□□□□ 0.28
UPF1-212ENST00000601689 POMPQ9Y244 141 aa16.79■□□□□ 0.28
UPF1-212ENST00000601689 CMAHPQ9Y471 501 aa16.79■□□□□ 0.28
UPF1-212ENST00000601689 U3KQV3 271 aa16.79■□□□□ 0.28
UPF1-212ENST00000601689 MED13LQ71F56 2210 aa16.79■□□□□ 0.28
UPF1-212ENST00000601689 ZNF503-AS2A6NEH8 195 aa16.78■□□□□ 0.28
UPF1-212ENST00000601689 E2F6O75461 281 aa16.78■□□□□ 0.28
UPF1-212ENST00000601689 PPP1R3DO95685 299 aa16.78■□□□□ 0.28
UPF1-212ENST00000601689 TXNDC12O95881 172 aa16.78■□□□□ 0.28
UPF1-212ENST00000601689 PATE4P0C8F1 98 aa16.78■□□□□ 0.28
UPF1-212ENST00000601689 CALCRP30988 508 aa16.78■□□□□ 0.28
UPF1-212ENST00000601689 CDAP32320 146 aa16.78■□□□□ 0.28
UPF1-212ENST00000601689 MESTQ5EB52 335 aa16.78■□□□□ 0.28
UPF1-212ENST00000601689 KRT80Q6KB66 452 aa16.78■□□□□ 0.28
UPF1-212ENST00000601689 SYT9Q86SS6 491 aa16.78■□□□□ 0.28
UPF1-212ENST00000601689 AQP11Q8NBQ7 271 aa16.78■□□□□ 0.28
UPF1-212ENST00000601689 SLC30A7Q8NEW0 376 aa16.78■□□□□ 0.28
UPF1-212ENST00000601689 RASD2Q96D21 266 aa16.78■□□□□ 0.28
UPF1-212ENST00000601689 NMD3Q96D46 503 aaKnown RBP16.78■□□□□ 0.28
UPF1-212ENST00000601689 ZNF224Q9NZL3 707 aa16.78■□□□□ 0.28
UPF1-212ENST00000601689 EIF3KQ9UBQ5 218 aaKnown RBP16.78■□□□□ 0.28
UPF1-212ENST00000601689 H7C1C5 153 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 ARPC3O15145 178 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 SLC16A7O60669 478 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 CD8AP01732 235 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 CST2P09228 141 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 OR4A8P0C604 315 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 FOSL1P15407 271 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 NR4A1P22736 598 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 RAD52P43351 418 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 CENPAP49450 140 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 LCN6P62502 163 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 THSD4Q6ZMP0 1018 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 ZNF620Q6ZNG0 422 aa16.77■□□□□ 0.28
UPF1-212ENST00000601689 ADGRG5Q8IZF4 528 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms