RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 GSSP48637 474 aa14.03□□□□□ -0.16
LSM4-206ENST00000600289 IDH3GP51553 393 aaPredicted RBP14.03□□□□□ -0.16
LSM4-206ENST00000600289 RAB1AP62820 205 aa14.03□□□□□ -0.16
LSM4-206ENST00000600289 ERVK-25P63136 954 aa14.03□□□□□ -0.16
LSM4-206ENST00000600289 CD47Q08722 323 aa14.03□□□□□ -0.16
LSM4-206ENST00000600289 SMARCD3Q6STE5 483 aa14.03□□□□□ -0.16
LSM4-206ENST00000600289 DPY19L2P2Q6ZN68 376 aa14.03□□□□□ -0.16
LSM4-206ENST00000600289 MUC15Q8N387 334 aa14.03□□□□□ -0.16
LSM4-206ENST00000600289 NABP1Q96AH0 204 aa14.03□□□□□ -0.16
LSM4-206ENST00000600289 ZNF570Q96NI8 536 aa14.03□□□□□ -0.16
LSM4-206ENST00000600289 RBP7Q96R05 134 aa14.03□□□□□ -0.16
LSM4-206ENST00000600289 SIAEQ9HAT2 523 aa14.03□□□□□ -0.16
LSM4-206ENST00000600289 CBLN4Q9NTU7 201 aa14.03□□□□□ -0.16
LSM4-206ENST00000600289 ADAM18Q9Y3Q7 739 aa14.03□□□□□ -0.16
LSM4-206ENST00000600289 IGHV2OR16-5A0A0B4J2B6 119 aa14.02□□□□□ -0.17
LSM4-206ENST00000600289 RAB36O95755 333 aa14.02□□□□□ -0.17
LSM4-206ENST00000600289 CD79AP11912 226 aa14.02□□□□□ -0.17
LSM4-206ENST00000600289 RASSF2P50749 326 aa14.02□□□□□ -0.17
LSM4-206ENST00000600289 MYBPC1Q00872 1141 aa14.02□□□□□ -0.17
LSM4-206ENST00000600289 FMODQ06828 376 aa14.02□□□□□ -0.17
LSM4-206ENST00000600289 TSPAN31Q12999 210 aa14.02□□□□□ -0.17
LSM4-206ENST00000600289 ETFDHQ16134 617 aa14.02□□□□□ -0.17
LSM4-206ENST00000600289 SLC36A2Q495M3 483 aa14.02□□□□□ -0.17
LSM4-206ENST00000600289 MESTQ5EB52 335 aa14.02□□□□□ -0.17
LSM4-206ENST00000600289 Q5PR19 223 aa14.02□□□□□ -0.17
LSM4-206ENST00000600289 ZNF770Q6IQ21 691 aaPredicted RBP14.02□□□□□ -0.17
LSM4-206ENST00000600289 PGBD2Q6P3X8 592 aa14.02□□□□□ -0.17
LSM4-206ENST00000600289 THSD4Q6ZMP0 1018 aa14.02□□□□□ -0.17
LSM4-206ENST00000600289 ADCK1Q86TW2 530 aa14.02□□□□□ -0.17
LSM4-206ENST00000600289 ADGRG5Q8IZF4 528 aa14.02□□□□□ -0.17
LSM4-206ENST00000600289 FBXL14Q8N1E6 418 aa14.02□□□□□ -0.17
LSM4-206ENST00000600289 GNPDA2Q8TDQ7 276 aa14.02□□□□□ -0.17
LSM4-206ENST00000600289 GTPBP3Q969Y2 492 aaKnown RBP14.02□□□□□ -0.17
LSM4-206ENST00000600289 PERPQ96FX8 193 aa14.02□□□□□ -0.17
LSM4-206ENST00000600289 Q96M85 177 aa14.02□□□□□ -0.17
LSM4-206ENST00000600289 C1orf198Q9H425 327 aa14.02□□□□□ -0.17
LSM4-206ENST00000600289 ZNF442Q9H7R0 627 aa14.02□□□□□ -0.17
LSM4-206ENST00000600289 ARID1AO14497 2285 aa14.02□□□□□ -0.17
LSM4-206ENST00000600289 IGKV1D-43A0A0B4J1Z2 117 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 SLC22A23A1A5C7 686 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 PRSS37A4D1T9 235 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 TNFRSF11BO00300 401 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 XKRYO14609 159 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 IMPA2O14732 288 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 ARPC3O15145 178 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 GSC2O15499 205 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 SERPINA5P05154 406 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 MMP7P09237 267 aaPredicted RBP14.01□□□□□ -0.17
LSM4-206ENST00000600289 ZNF35P13682 527 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 GIPRP48546 466 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 PTDSS1P48651 473 aaKnown RBP14.01□□□□□ -0.17
LSM4-206ENST00000600289 FABP6P51161 128 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 RPS6KA3P51812 740 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 NPRL3Q12980 569 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 KRR1Q13601 381 aaKnown RBP14.01□□□□□ -0.17
LSM4-206ENST00000600289 RFX4Q33E94 735 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 OR2T5Q6IEZ7 315 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 RPL13AP3Q6NVV1 102 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 TMEM53Q6P2H8 277 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 SLC16A14Q7RTX9 510 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 ZNF584Q8IVC4 421 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 OR2T29Q8NH02 315 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 FANK1Q8TC84 345 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 TRMT61AQ96FX7 289 aaKnown RBP14.01□□□□□ -0.17
LSM4-206ENST00000600289 SNX18Q96RF0 628 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 SH3GL3Q99963 347 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 WACQ9BTA9 647 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 OR52D1Q9H346 318 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 CA10Q9NS85 328 aa14.01□□□□□ -0.17
LSM4-206ENST00000600289 VSX1Q9NZR4 365 aaPredicted RBP14.01□□□□□ -0.17
LSM4-206ENST00000600289 ARFGEF3Q5TH69 2177 aa14□□□□□ -0.17
LSM4-206ENST00000600289 TEX13CA0A0J9YWL9 993 aa14□□□□□ -0.17
LSM4-206ENST00000600289 DHRS12A0PJE2 317 aa14□□□□□ -0.17
LSM4-206ENST00000600289 H7C417 338 aa14□□□□□ -0.17
LSM4-206ENST00000600289 LY6G6DO95868 133 aa14□□□□□ -0.17
LSM4-206ENST00000600289 PCSK6P29122 969 aa14□□□□□ -0.17
LSM4-206ENST00000600289 SLC6A6P31641 620 aa14□□□□□ -0.17
LSM4-206ENST00000600289 HGFACQ04756 655 aa14□□□□□ -0.17
LSM4-206ENST00000600289 PIGFQ07326 219 aa14□□□□□ -0.17
LSM4-206ENST00000600289 FLOT2Q14254 428 aa14□□□□□ -0.17
LSM4-206ENST00000600289 EFNB3Q15768 340 aa14□□□□□ -0.17
LSM4-206ENST00000600289 SWI5Q1ZZU3 235 aa14□□□□□ -0.17
LSM4-206ENST00000600289 FAM27BQ5VT28 67 aa14□□□□□ -0.17
LSM4-206ENST00000600289 ZNF620Q6ZNG0 422 aa14□□□□□ -0.17
LSM4-206ENST00000600289 CLDN22Q8N7P3 220 aa14□□□□□ -0.17
LSM4-206ENST00000600289 FGFBP3Q8TAT2 258 aa14□□□□□ -0.17
LSM4-206ENST00000600289 CADM1Q9BY67 442 aaKnown RBP14□□□□□ -0.17
LSM4-206ENST00000600289 REEP1Q9H902 201 aa14□□□□□ -0.17
LSM4-206ENST00000600289 FBXO9Q9UK97 447 aaPredicted RBP14□□□□□ -0.17
LSM4-206ENST00000600289 POMPQ9Y244 141 aa14□□□□□ -0.17
LSM4-206ENST00000600289 TCRBV3S1A0A5B6 114 aa13.99□□□□□ -0.17
LSM4-206ENST00000600289 ARRDC5A6NEK1 342 aa13.99□□□□□ -0.17
LSM4-206ENST00000600289 CCNB2O95067 398 aa13.99□□□□□ -0.17
LSM4-206ENST00000600289 PTHP01270 115 aa13.99□□□□□ -0.17
LSM4-206ENST00000600289 CST2P09228 141 aa13.99□□□□□ -0.17
LSM4-206ENST00000600289 BMP4P12644 408 aa13.99□□□□□ -0.17
LSM4-206ENST00000600289 ATP5J2P56134 94 aa13.99□□□□□ -0.17
LSM4-206ENST00000600289 ADIPOQQ15848 244 aa13.99□□□□□ -0.17
LSM4-206ENST00000600289 MICAQ29983 383 aa13.99□□□□□ -0.17
LSM4-206ENST00000600289 YTHDF3Q7Z739 585 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms