RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 MMP7P09237 267 aaPredicted RBP11.97□□□□□ -0.49
VRK3-219ENST00000600137 PATE4P0C8F1 98 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 CBR1P16152 277 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 ZNF23P17027 643 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 ZNF83P51522 516 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.97□□□□□ -0.49
VRK3-219ENST00000600137 GINS1Q14691 196 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 PGGHGQ32M88 737 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 FAM27BQ5VT28 67 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 ALKBH2Q6NS38 261 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 LEG1Q6P5S2 330 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 ZBTB46Q86UZ6 589 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 CDC20BQ86Y33 519 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 CCDC36Q8IYA8 594 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 PQLC1Q8N2U9 271 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 OR2T33Q8NG76 320 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 OR52E2Q8NGJ4 325 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 PIK3IP1Q96FE7 263 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 SH3GL3Q99963 347 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 RBM4Q9BWF3 364 aaKnown RBP11.97□□□□□ -0.49
VRK3-219ENST00000600137 NMNAT2Q9BZQ4 307 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 SEC61A2Q9H9S3 476 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 SIAEQ9HAT2 523 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 TBC1D23Q9NUY8 699 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 TEX15Q9BXT5 2789 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 IGHV1-18A0A0C4DH31 117 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 MGRN1O60291 552 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 SLC16A7O60669 478 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 MPZL1O95297 269 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 CELA3BP08861 270 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 OR8G3PP0DMU2 310 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 CD40P25942 277 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 GRK5P34947 590 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 POLR2IP36954 125 aaKnown RBP11.96□□□□□ -0.49
VRK3-219ENST00000600137 ZNF84P51523 738 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 CRISP1P54107 249 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 EFNB1P98172 346 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 BSPH1Q075Z2 132 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 ENDOGQ14249 297 aaKnown RBP11.96□□□□□ -0.49
VRK3-219ENST00000600137 C3orf36Q3SXR2 165 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 TMEM236Q5W0B7 351 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 UGT2A3Q6UWM9 527 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 MDP1Q86V88 176 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 ZNF584Q8IVC4 421 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 CYB561A3Q8NBI2 242 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 SLC37A3Q8NCC5 494 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 ICA1LQ8NDH6 482 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 SDR9C7Q8NEX9 313 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 OR52L1Q8NGH7 329 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 DNAJC9Q8WXX5 260 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 PTP4A1Q93096 173 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 FBXO17Q96EF6 278 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 SLC29A1Q99808 456 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 LIME1Q9H400 295 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 ZNF556Q9HAH1 456 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 SLC25A19Q9HC21 320 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 POLE4Q9NR33 117 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 PAPOLBQ9NRJ5 636 aaKnown RBP11.96□□□□□ -0.49
VRK3-219ENST00000600137 CMC2Q9NRP2 79 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 BAIAP2Q9UQB8 552 aa11.96□□□□□ -0.49
VRK3-219ENST00000600137 COA3Q9Y2R0 106 aaPredicted RBP11.96□□□□□ -0.49
VRK3-219ENST00000600137 SHISA9B4DS77 424 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 H3BN98 237 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 KHDRBS3O75525 346 aaKnown RBP11.95□□□□□ -0.5
VRK3-219ENST00000600137 GPANK1O95872 356 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 WNT11O96014 354 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 ALPLP05186 524 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 GAAP10253 952 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 NR2C1P13056 603 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 ZNF14P17017 642 aaPredicted RBP11.95□□□□□ -0.5
VRK3-219ENST00000600137 POU1F1P28069 291 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 LAP3P28838 519 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 NOS3P29474 1203 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 UBE2NP61088 152 aaKnown RBP11.95□□□□□ -0.5
VRK3-219ENST00000600137 RAB1AP62820 205 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 ELF3P78545 371 aaPredicted RBP11.95□□□□□ -0.5
VRK3-219ENST00000600137 PIGFQ07326 219 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 CRMP1Q14194 572 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 PTGES3Q15185 160 aaKnown RBP11.95□□□□□ -0.5
VRK3-219ENST00000600137 KCNMB1Q16558 191 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 OTPQ5XKR4 325 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 SLC27A4Q6P1M0 643 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 TEX47Q8TBZ9 253 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 FOXN4Q96NZ1 517 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 CIB1Q99828 191 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 HCAR1Q9BXC0 346 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 CLEC4MQ9H2X3 399 aaPredicted RBP11.95□□□□□ -0.5
VRK3-219ENST00000600137 FN3KQ9H479 309 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 SRA1Q9HD15 236 aaKnown RBP11.95□□□□□ -0.5
VRK3-219ENST00000600137 NGBQ9NPG2 151 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 USE1Q9NZ43 259 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 FKBP7Q9Y680 259 aa11.95□□□□□ -0.5
VRK3-219ENST00000600137 SURF4O15260 269 aa11.94□□□□□ -0.5
VRK3-219ENST00000600137 TFP02787 698 aa11.94□□□□□ -0.5
VRK3-219ENST00000600137 CECR9P0C854 216 aa11.94□□□□□ -0.5
VRK3-219ENST00000600137 NPR2P20594 1047 aa11.94□□□□□ -0.5
VRK3-219ENST00000600137 PAX7P23759 505 aa11.94□□□□□ -0.5
VRK3-219ENST00000600137 PTAFRP25105 342 aa11.94□□□□□ -0.5
VRK3-219ENST00000600137 NR1H2P55055 460 aa11.94□□□□□ -0.5
VRK3-219ENST00000600137 ESRRGP62508 458 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms