RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 PLEKHA8Q96JA3 519 aa12.56□□□□□ -0.4
VRK3-213ENST00000597215 SLC38A2Q96QD8 506 aa12.56□□□□□ -0.4
VRK3-213ENST00000597215 RIBC2Q9H4K1 309 aa12.56□□□□□ -0.4
VRK3-213ENST00000597215 RERGLQ9H628 205 aa12.56□□□□□ -0.4
VRK3-213ENST00000597215 SEC61A2Q9H9S3 476 aa12.56□□□□□ -0.4
VRK3-213ENST00000597215 SIAEQ9HAT2 523 aa12.56□□□□□ -0.4
VRK3-213ENST00000597215 MOV10Q9HCE1 1003 aaKnown RBP12.56□□□□□ -0.4
VRK3-213ENST00000597215 FKBP7Q9Y680 259 aa12.56□□□□□ -0.4
VRK3-213ENST00000597215 PRR14LQ5THK1 2151 aa12.56□□□□□ -0.4
VRK3-213ENST00000597215 A6NNC1 897 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 ZAR1LA6NP61 321 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 SURF4O15260 269 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 UBL3O95164 117 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 MSR1P21757 451 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 PAICSP22234 425 aaKnown RBP12.55□□□□□ -0.4
VRK3-213ENST00000597215 NPRL3Q12980 569 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 ETFDHQ16134 617 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 SGCAQ16586 387 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 BEX5Q5H9J7 111 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 TMEM236Q5W0B7 351 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 ZNF787Q6DD87 383 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 SEZ6L2Q6UXD5 910 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 DPPA2Q7Z7J5 298 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 ZBTB46Q86UZ6 589 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 GLB1L2Q8IW92 636 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 OR6V1Q8N148 313 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 OR2T4Q8NH00 348 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 NABP1Q96AH0 204 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 C14orf79Q96F83 325 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 TSSK2Q96PF2 358 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 DDOQ99489 341 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 RACGAP1Q9H0H5 632 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 KCNN2Q9H2S1 579 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 FN3KQ9H479 309 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 RNPEPL1Q9HAU8 725 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 SRA1Q9HD15 236 aaKnown RBP12.55□□□□□ -0.4
VRK3-213ENST00000597215 C8orf4Q9NR00 106 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 B9D1Q9UPM9 204 aa12.55□□□□□ -0.4
VRK3-213ENST00000597215 COA3Q9Y2R0 106 aaPredicted RBP12.55□□□□□ -0.4
VRK3-213ENST00000597215 IGLV1-36A0A0B4J1U3 117 aa12.54□□□□□ -0.4
VRK3-213ENST00000597215 CD79AP11912 226 aa12.54□□□□□ -0.4
VRK3-213ENST00000597215 LAP3P28838 519 aa12.54□□□□□ -0.4
VRK3-213ENST00000597215 EPHA2P29317 976 aa12.54□□□□□ -0.4
VRK3-213ENST00000597215 CENPAP49450 140 aa12.54□□□□□ -0.4
VRK3-213ENST00000597215 SLC25A1P53007 311 aa12.54□□□□□ -0.4
VRK3-213ENST00000597215 NR1H2P55055 460 aa12.54□□□□□ -0.4
VRK3-213ENST00000597215 TUBA1BP68363 451 aa12.54□□□□□ -0.4
VRK3-213ENST00000597215 TUBA4AP68366 448 aa12.54□□□□□ -0.4
VRK3-213ENST00000597215 GLO1Q04760 184 aa12.54□□□□□ -0.4
VRK3-213ENST00000597215 SNAPC1Q16533 368 aa12.54□□□□□ -0.4
VRK3-213ENST00000597215 SLX4IPQ5VYV7 408 aa12.54□□□□□ -0.4
VRK3-213ENST00000597215 TUBA1AQ71U36 451 aa12.54□□□□□ -0.4
VRK3-213ENST00000597215 SLC16A14Q7RTX9 510 aa12.54□□□□□ -0.4
VRK3-213ENST00000597215 SKA3Q8IX90 412 aa12.54□□□□□ -0.4
VRK3-213ENST00000597215 FAM169BQ8N8A8 192 aa12.54□□□□□ -0.4
VRK3-213ENST00000597215 PROKR2Q8NFJ6 384 aa12.54□□□□□ -0.4
VRK3-213ENST00000597215 HTRA1Q92743 480 aa12.54□□□□□ -0.4
VRK3-213ENST00000597215 SLC29A1Q99808 456 aa12.54□□□□□ -0.4
VRK3-213ENST00000597215 SH3GL3Q99963 347 aa12.54□□□□□ -0.4
VRK3-213ENST00000597215 POLE4Q9NR33 117 aa12.54□□□□□ -0.4
VRK3-213ENST00000597215 TVP23BQ9NYZ1 205 aa12.54□□□□□ -0.4
VRK3-213ENST00000597215 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.53□□□□□ -0.4
VRK3-213ENST00000597215 DEFB108AA8MXU0 73 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 PRR23D1E9PI22 279 aaPredicted RBP12.53□□□□□ -0.4
VRK3-213ENST00000597215 DCTN6O00399 190 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 CASQ2O14958 399 aaPredicted RBP12.53□□□□□ -0.4
VRK3-213ENST00000597215 HLA-HP01893 362 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 PRR23D2P0DMB1 279 aaPredicted RBP12.53□□□□□ -0.4
VRK3-213ENST00000597215 PEX2P28328 305 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 SSTR2P30874 369 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 POLR2IP36954 125 aaKnown RBP12.53□□□□□ -0.4
VRK3-213ENST00000597215 ZNF83P51522 516 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 SLC34A1Q06495 639 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 LRRC36Q1X8D7 754 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 GSG1Q2KHT4 349 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 C3orf36Q3SXR2 165 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 SLC36A2Q495M3 483 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 FAM27BQ5VT28 67 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 FBXW10Q5XX13 1052 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 LPCAT4Q643R3 524 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 C12orf73Q69YU5 71 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 MDP1Q86V88 176 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 LRRC18Q8N456 261 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 PACRGLQ8N7B6 248 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 OR9Q1Q8NGQ5 310 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 OTULINQ96BN8 352 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 PLPPR2Q96GM1 343 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 RDH12Q96NR8 316 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 FOXN4Q96NZ1 517 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 C1QTNF6Q9BXI9 259 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 NMNAT2Q9BZQ4 307 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 ESRP2Q9H6T0 727 aaKnown RBP12.53□□□□□ -0.4
VRK3-213ENST00000597215 ZNF224Q9NZL3 707 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 NPAP1Q9NZP6 1156 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 HECTD1Q9ULT8 2610 aa12.53□□□□□ -0.4
VRK3-213ENST00000597215 ZNF503-AS2A6NEH8 195 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 FAM183AA6NL82 134 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 M0R1B8 84 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 SIAH2O43255 324 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 RAB36O95755 333 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms