RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 SDR9C7Q8NEX9 313 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 OR1K1Q8NGR3 316 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 LINC01560Q8TB33 94 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 BOD1Q96IK1 185 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 WFIKKN1Q96NZ8 548 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 SNX18Q96RF0 628 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 DDOQ99489 341 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 FOXB1Q99853 325 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 USB1Q9BQ65 265 aaKnown RBP13.12□□□□□ -0.31
DDX49-204ENST00000595858 SLC25A19Q9HC21 320 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 NDRG3Q9UGV2 375 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 ORC6Q9Y5N6 252 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 A0A1B0GVG6 124 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 RENP00797 406 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 HMGN1P05114 100 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 PPP3CBP16298 524 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 RAD23AP54725 363 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 ANKRD16Q6P6B7 361 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 ZNF627Q7L945 461 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 ZNF786Q8N393 782 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 NSMAFQ92636 917 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 BCL2L2Q92843 193 aaPredicted RBP13.12□□□□□ -0.31
DDX49-204ENST00000595858 GABARAPL3Q9BY60 117 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 NUAK2Q9H093 628 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 CMC2Q9NRP2 79 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 PLEKHB1Q9UF11 243 aaPredicted RBP13.12□□□□□ -0.31
DDX49-204ENST00000595858 KLHL21Q9UJP4 597 aa13.12□□□□□ -0.31
DDX49-204ENST00000595858 OR6C68A6NDL8 312 aa13.11□□□□□ -0.31
DDX49-204ENST00000595858 OR5H1A6NKK0 313 aa13.11□□□□□ -0.31
DDX49-204ENST00000595858 ZAR1LA6NP61 321 aa13.11□□□□□ -0.31
DDX49-204ENST00000595858 SLC16A7O60669 478 aa13.11□□□□□ -0.31
DDX49-204ENST00000595858 SEC14L2O76054 403 aa13.11□□□□□ -0.31
DDX49-204ENST00000595858 CTLA4P16410 223 aa13.11□□□□□ -0.31
DDX49-204ENST00000595858 ZNF84P51523 738 aa13.11□□□□□ -0.31
DDX49-204ENST00000595858 DCTN2Q13561 401 aaKnown RBP13.11□□□□□ -0.31
DDX49-204ENST00000595858 ETFDHQ16134 617 aa13.11□□□□□ -0.31
DDX49-204ENST00000595858 TIMM23BQ5SRD1 257 aa13.11□□□□□ -0.31
DDX49-204ENST00000595858 MEX3BQ6ZN04 569 aaKnown RBP13.11□□□□□ -0.31
DDX49-204ENST00000595858 P2RY8Q86VZ1 359 aa13.11□□□□□ -0.31
DDX49-204ENST00000595858 CYB561A3Q8NBI2 242 aa13.11□□□□□ -0.31
DDX49-204ENST00000595858 SLC37A3Q8NCC5 494 aa13.11□□□□□ -0.31
DDX49-204ENST00000595858 TSSK2Q96PF2 358 aa13.11□□□□□ -0.31
DDX49-204ENST00000595858 SPOCK3Q9BQ16 436 aa13.11□□□□□ -0.31
DDX49-204ENST00000595858 MED18Q9BUE0 208 aa13.11□□□□□ -0.31
DDX49-204ENST00000595858 TEX12Q9BXU0 123 aa13.11□□□□□ -0.31
DDX49-204ENST00000595858 NELFAQ9H3P2 528 aa13.11□□□□□ -0.31
DDX49-204ENST00000595858 RIBC2Q9H4K1 309 aa13.11□□□□□ -0.31
DDX49-204ENST00000595858 A0A096LPE4 126 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 A0A1W2PPZ6 126 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 SH3D21A4FU49 640 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 IFNGP01579 166 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 COL8A1P27658 744 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 PCSK6P29122 969 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 KIR2DL3P43628 341 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 CRMP1Q14194 572 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 TBRG1Q3YBR2 411 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 HIKESHIQ53FT3 197 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 ZNF813Q6ZN06 617 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 OR6V1Q8N148 313 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 C17orf78Q8N4C9 275 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 WDR31Q8NA23 367 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 ZNF420Q8TAQ5 688 aaPredicted RBP13.1□□□□□ -0.31
DDX49-204ENST00000595858 HSD17B8Q92506 261 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 DACH2Q96NX9 599 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 SRA1Q9HD15 236 aaKnown RBP13.1□□□□□ -0.31
DDX49-204ENST00000595858 RPRD1BQ9NQG5 326 aaKnown RBP13.1□□□□□ -0.31
DDX49-204ENST00000595858 SLC17A5Q9NRA2 495 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 TVP23BQ9NYZ1 205 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 UGT2A1Q9Y4X1 527 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 PRR14LQ5THK1 2151 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 RIIAD1A6NNX1 92 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 DCTN6O00399 190 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 SURF4O15260 269 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 GNAO1P09471 354 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 B4GALT1P15291 398 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 CRABP1P29762 137 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 CDAP32320 146 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 DBPQ10586 325 aaPredicted RBP13.1□□□□□ -0.31
DDX49-204ENST00000595858 TAB1Q15750 504 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 ZIK1Q3SY52 487 aaPredicted RBP13.1□□□□□ -0.31
DDX49-204ENST00000595858 SLX4IPQ5VYV7 408 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 USP51Q70EK9 711 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 OR52N5Q8NH56 324 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 CYGBQ8WWM9 190 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 TMIGD2Q96BF3 282 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 RDH12Q96NR8 316 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 FN3KQ9H479 309 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 RERGLQ9H628 205 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 TMEM38BQ9NVV0 291 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 CRIM1Q9NZV1 1036 aa13.1□□□□□ -0.31
DDX49-204ENST00000595858 A0A1W2PR80 420 aa13.09□□□□□ -0.31
DDX49-204ENST00000595858 KHDRBS3O75525 346 aaKnown RBP13.09□□□□□ -0.31
DDX49-204ENST00000595858 SNAP29O95721 258 aa13.09□□□□□ -0.31
DDX49-204ENST00000595858 THBDP07204 575 aa13.09□□□□□ -0.31
DDX49-204ENST00000595858 HOXB1P14653 301 aaPredicted RBP13.09□□□□□ -0.31
DDX49-204ENST00000595858 ZNF3P17036 446 aa13.09□□□□□ -0.31
DDX49-204ENST00000595858 ADARB1P78563 741 aaKnown RBP13.09□□□□□ -0.31
DDX49-204ENST00000595858 MRPS34P82930 218 aaKnown RBP13.09□□□□□ -0.31
DDX49-204ENST00000595858 KLHL24Q6TFL4 600 aa13.09□□□□□ -0.31
DDX49-204ENST00000595858 CROCCP3Q8IVE0 287 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms