RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 YAP1P46937 504 aaKnown RBP11.33□□□□□ -0.6
H3F3B-213ENST00000593254 GSK3BP49841 420 aa11.33□□□□□ -0.6
H3F3B-213ENST00000593254 MRPS34P82930 218 aaKnown RBP11.33□□□□□ -0.6
H3F3B-213ENST00000593254 FHL1Q13642 323 aa11.33□□□□□ -0.6
H3F3B-213ENST00000593254 IFI44LQ53G44 452 aa11.33□□□□□ -0.6
H3F3B-213ENST00000593254 ALG10Q5BKT4 473 aa11.33□□□□□ -0.6
H3F3B-213ENST00000593254 TMEM53Q6P2H8 277 aa11.33□□□□□ -0.6
H3F3B-213ENST00000593254 NRMQ8IXM6 262 aa11.33□□□□□ -0.6
H3F3B-213ENST00000593254 ZNF786Q8N393 782 aa11.33□□□□□ -0.6
H3F3B-213ENST00000593254 PAQR4Q8N4S7 273 aaPredicted RBP11.33□□□□□ -0.6
H3F3B-213ENST00000593254 SLC30A7Q8NEW0 376 aa11.33□□□□□ -0.6
H3F3B-213ENST00000593254 HDAC2Q92769 488 aaKnown RBP11.33□□□□□ -0.6
H3F3B-213ENST00000593254 SYT3Q9BQG1 590 aa11.33□□□□□ -0.6
H3F3B-213ENST00000593254 FNDC11Q9BVV2 318 aa11.33□□□□□ -0.6
H3F3B-213ENST00000593254 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.33□□□□□ -0.6
H3F3B-213ENST00000593254 RHCGQ9UBD6 479 aa11.33□□□□□ -0.6
H3F3B-213ENST00000593254 ABCD2Q9UBJ2 740 aa11.33□□□□□ -0.6
H3F3B-213ENST00000593254 CMYA5Q8N3K9 4069 aa11.33□□□□□ -0.6
H3F3B-213ENST00000593254 IGKV1D-43A0A0B4J1Z2 117 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 SLC22A23A1A5C7 686 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 NDUFAB1O14561 156 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 GSTA4O15217 222 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 TCF21O43680 179 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 SLC2A10O95528 541 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 SNAP29O95721 258 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 ZNF682O95780 498 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 SERPINA1P01009 418 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 NR2C1P13056 603 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 MAKP20794 623 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 NUDT2P50583 147 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 RPL27P61353 136 aaKnown RBP11.32□□□□□ -0.6
H3F3B-213ENST00000593254 PRKCDQ05655 676 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 FMODQ06828 376 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 RIN1Q13671 783 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 TRAM2Q15035 370 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 ANKDD1AQ495B1 522 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 IQCCQ4KMZ1 466 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 C12orf54Q6X4T0 127 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 LRP11Q86VZ4 500 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 RNF113BQ8IZP6 322 aaKnown RBP11.32□□□□□ -0.6
H3F3B-213ENST00000593254 LRRC75AQ8NAA5 344 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 RBM15BQ8NDT2 890 aaKnown RBP11.32□□□□□ -0.6
H3F3B-213ENST00000593254 UBASH3BQ8TF42 649 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 ACOT11Q8WXI4 607 aaPredicted RBP11.32□□□□□ -0.6
H3F3B-213ENST00000593254 NABP1Q96AH0 204 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 HSH2DQ96JZ2 352 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 ALG12Q9BV10 488 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 MYLK2Q9H1R3 596 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 TPK1Q9H3S4 243 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 MS4A5Q9H3V2 200 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 RNF121Q9H920 327 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 SIAEQ9HAT2 523 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 MYEF2Q9P2K5 600 aaKnown RBP11.32□□□□□ -0.6
H3F3B-213ENST00000593254 REV1Q9UBZ9 1251 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 FZR1Q9UM11 496 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 UGT2A1Q9Y4X1 527 aa11.32□□□□□ -0.6
H3F3B-213ENST00000593254 TRAV27A0A087WT01 109 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 A0A087WUU8 490 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 GMNCA6NCL1 334 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 LILRA1O75019 489 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 PTHP01270 115 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 TACSTD2P09758 323 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 FAM157BP0CG42 384 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 SAGP10523 405 aaPredicted RBP11.31□□□□□ -0.6
H3F3B-213ENST00000593254 CCL2P13500 99 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 ITGA2P17301 1181 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 EGR1P18146 543 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 CDAP32320 146 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 ALDH3B1P43353 468 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 PLP2Q04941 152 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 CD47Q08722 323 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 TOP3AQ13472 1001 aaPredicted RBP11.31□□□□□ -0.6
H3F3B-213ENST00000593254 TBC1D28Q2M2D7 210 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 FAM205BPQ63HN1 556 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 RGS7BPQ6MZT1 257 aaPredicted RBP11.31□□□□□ -0.6
H3F3B-213ENST00000593254 SLC25A47Q6Q0C1 308 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 FKBP9P1Q75LS8 142 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 LRRC18Q8N456 261 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.31□□□□□ -0.6
H3F3B-213ENST00000593254 ZNF519Q8TB69 540 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 FNDC8Q8TC99 324 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 CMTM5Q96DZ9 223 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 KCTD14Q9BQ13 255 aaPredicted RBP11.31□□□□□ -0.6
H3F3B-213ENST00000593254 ELAC2Q9BQ52 826 aaKnown RBP11.31□□□□□ -0.6
H3F3B-213ENST00000593254 CDH20Q9HBT6 801 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 ZNF346Q9UL40 294 aaKnown RBP11.31□□□□□ -0.6
H3F3B-213ENST00000593254 WNK2Q9Y3S1 2297 aa11.31□□□□□ -0.6
H3F3B-213ENST00000593254 PRKDCP78527 4128 aaKnown RBP11.31□□□□□ -0.6
H3F3B-213ENST00000593254 IGLV3-9A0A075B6K5 115 aa11.3□□□□□ -0.6
H3F3B-213ENST00000593254 IQCMA0A1B0GVH7 501 aa11.3□□□□□ -0.6
H3F3B-213ENST00000593254 EFCAB9A8MZ26 197 aa11.3□□□□□ -0.6
H3F3B-213ENST00000593254 ZNF250P15622 560 aa11.3□□□□□ -0.6
H3F3B-213ENST00000593254 APEX1P27695 318 aaKnown RBP11.3□□□□□ -0.6
H3F3B-213ENST00000593254 SLC9A3P48764 834 aa11.3□□□□□ -0.6
H3F3B-213ENST00000593254 SEC24CP53992 1094 aa11.3□□□□□ -0.6
H3F3B-213ENST00000593254 CTXN1P60606 82 aa11.3□□□□□ -0.6
H3F3B-213ENST00000593254 PSME3P61289 254 aa11.3□□□□□ -0.6
H3F3B-213ENST00000593254 MAD2L1BPQ15013 274 aaPredicted RBP11.3□□□□□ -0.6
H3F3B-213ENST00000593254 PABPC1L2AQ5JQF8 200 aa11.3□□□□□ -0.6
H3F3B-213ENST00000593254 ELFN2Q5R3F8 820 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms