RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 PITPNAQ00169 270 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 CYP24A1Q07973 514 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 RBBP4Q09028 425 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 SMARCB1Q12824 385 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 KIAA0141Q14154 515 aaPredicted RBP3.98□□□□□ -1.77
SMAD4-216ENST00000593223 EXOSC7Q15024 291 aaKnown RBP3.98□□□□□ -1.77
SMAD4-216ENST00000593223 QRICH1Q2TAL8 776 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 NDUFAF6Q330K2 333 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 AKIRIN2Q53H80 203 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 GPR107Q5VW38 600 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 KHDRBS2Q5VWX1 349 aaKnown RBP3.98□□□□□ -1.77
SMAD4-216ENST00000593223 OR52W1Q6IF63 320 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 Q71RC1 249 aaPredicted RBP3.98□□□□□ -1.77
SMAD4-216ENST00000593223 RANBP3LQ86VV4 465 aaPredicted RBP3.98□□□□□ -1.77
SMAD4-216ENST00000593223 P2RY8Q86VZ1 359 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 MCOLN2Q8IZK6 566 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 TMEM99Q8N816 258 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 OR5M9Q8NGP3 310 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 NUBPLQ8TB37 319 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 SAP25Q8TEE9 199 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 PIH1D2Q8WWB5 315 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 CPB2Q96IY4 423 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 CSPG4P5Q96PW8 444 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 IL4I1Q96RQ9 567 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 RANBP9Q96S59 729 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 CHCHD5Q9BSY4 110 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 CCDC28BQ9BUN5 200 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 PAPOLGQ9BWT3 736 aaKnown RBP3.98□□□□□ -1.77
SMAD4-216ENST00000593223 ERVK-6Q9BXR3 956 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 NXF3Q9H4D5 531 aaKnown RBP3.98□□□□□ -1.77
SMAD4-216ENST00000593223 C5orf66Q9H5L9 145 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 KAT8Q9H7Z6 458 aaKnown RBP3.98□□□□□ -1.77
SMAD4-216ENST00000593223 IL1RL2Q9HB29 575 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 TRMT112Q9UI30 125 aaKnown RBP3.98□□□□□ -1.77
SMAD4-216ENST00000593223 PRG3Q9Y2Y8 225 aaPredicted RBP3.98□□□□□ -1.77
SMAD4-216ENST00000593223 RNF115Q9Y4L5 304 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 CACNG2Q9Y698 323 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 RELNP78509 3460 aa3.98□□□□□ -1.77
SMAD4-216ENST00000593223 SPTA1P02549 2419 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 DMXL2Q8TDJ6 3036 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 SPTAN1Q13813 2472 aaKnown RBP3.97□□□□□ -1.77
SMAD4-216ENST00000593223 AKAP13Q12802 2813 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 RALGAPA2Q2PPJ7 1873 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 CCT8L1PA6NM43 557 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 LOC730098B7Z3J9 87 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 RFXANKO14593 260 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 CLOCKO15516 846 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 SYT7O43581 403 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 OR2J3O76001 311 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 NXPH4O95158 308 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 EPOP01588 193 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 IGHV3-13P01766 116 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 FABP1P07148 127 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 GATA1P15976 413 aaPredicted RBP3.97□□□□□ -1.77
SMAD4-216ENST00000593223 M6PRP20645 277 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 MAGP20916 626 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 HSD11B1P28845 292 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 GTF2H1P32780 548 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 UGT1A5P35504 534 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 SLC1A2P43004 574 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 RFX3P48380 749 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 MRPL19P49406 292 aaKnown RBP3.97□□□□□ -1.77
SMAD4-216ENST00000593223 HMGCS2P54868 508 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 NUP107P57740 925 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 ATP6V0D1P61421 351 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 LMO4P61968 165 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 LCN2P80188 198 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 GABPAQ06546 454 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 FCHO2Q0JRZ9 810 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 GRB7Q14451 532 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 TSC22D1Q15714 1073 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 ZNF699Q32M78 642 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 ACSF3Q4G176 576 aaPredicted RBP3.97□□□□□ -1.77
SMAD4-216ENST00000593223 PAN3Q58A45 887 aaKnown RBP3.97□□□□□ -1.77
SMAD4-216ENST00000593223 SPANXN4Q5MJ08 99 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 SEL1L2Q5TEA6 688 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 SLX4IPQ5VYV7 408 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 STUMQ69YW2 141 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 TCEAL6Q6IPX3 200 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 TMPRSS11AQ6ZMR5 421 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 TAC4Q86UU9 113 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 GPBP1Q86WP2 473 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 ZNF677Q86XU0 584 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 CRLF3Q8IUI8 442 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 GID4Q8IVV7 300 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 ZC3H3Q8IXZ2 948 aaKnown RBP3.97□□□□□ -1.77
SMAD4-216ENST00000593223 SLC38A6Q8IZM9 456 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 SYS1Q8N2H4 156 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 Q8N377 158 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 Q8N9G6 341 aaPredicted RBP3.97□□□□□ -1.77
SMAD4-216ENST00000593223 SUMF1Q8NBK3 374 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 MFSD9Q8NBP5 474 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 RNF149Q8NC42 400 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 WDR36Q8NI36 951 aaKnown RBP3.97□□□□□ -1.77
SMAD4-216ENST00000593223 PYDC1Q8WXC3 89 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 PSMG2Q969U7 264 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 MYLPFQ96A32 169 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 CELF6Q96J87 481 aaKnown RBP3.97□□□□□ -1.77
SMAD4-216ENST00000593223 HSD17B14Q9BPX1 270 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 FUNDC2Q9BWH2 189 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms