RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 POC1BQ8TC44 478 aa17.66■□□□□ 0.42
CLIP3-206ENST00000593074 LOXL4Q96JB6 756 aa17.66■□□□□ 0.42
CLIP3-206ENST00000593074 CMKLR1Q99788 373 aa17.66■□□□□ 0.42
CLIP3-206ENST00000593074 NUFIP1Q9UHK0 495 aaKnown RBP17.66■□□□□ 0.42
CLIP3-206ENST00000593074 NPIPA1Q9UND3 350 aa17.66■□□□□ 0.42
CLIP3-206ENST00000593074 A0A1W2PNV4 684 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 A8MV72 311 aaPredicted RBP17.65■□□□□ 0.42
CLIP3-206ENST00000593074 B4E171 279 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 SHISA8B8ZZ34 492 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 ADRB1P08588 477 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 TSPAN7P41732 249 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 HSF1Q00613 529 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 KCTD18Q6PI47 426 aaPredicted RBP17.65■□□□□ 0.42
CLIP3-206ENST00000593074 OR51A4Q8NGJ6 313 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 SMIM4Q8WVI0 70 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 MCHR2Q969V1 340 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 TMEM106AQ96A25 262 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 ZNF486Q96H40 463 aaPredicted RBP17.65■□□□□ 0.42
CLIP3-206ENST00000593074 B3GALT5Q9Y2C3 310 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 COA3Q9Y2R0 106 aaPredicted RBP17.65■□□□□ 0.42
CLIP3-206ENST00000593074 VPS13AQ96RL7 3174 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 TRAV8-7A0A075B6U6 113 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 TEX51A0A1B0GUA7 166 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 KLF7O75840 302 aaPredicted RBP17.65■□□□□ 0.42
CLIP3-206ENST00000593074 CD3GP09693 182 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 POU3F1Q03052 451 aaPredicted RBP17.65■□□□□ 0.42
CLIP3-206ENST00000593074 DNM1P34Q6PK57 102 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 KRT74Q7RTS7 529 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.65■□□□□ 0.42
CLIP3-206ENST00000593074 WDFY1Q8IWB7 410 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 SLC26A10Q8NG04 563 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 OR2M3Q8NG83 312 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 ZFP3Q96NJ6 502 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 ABHD6Q9BV23 337 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 ZNF700Q9H0M5 742 aa17.65■□□□□ 0.42
CLIP3-206ENST00000593074 WDR87Q6ZQQ6 2873 aa17.64■□□□□ 0.41
CLIP3-206ENST00000593074 IGHV1-45A0A0A0MS14 117 aa17.64■□□□□ 0.41
CLIP3-206ENST00000593074 H3BML4 177 aa17.64■□□□□ 0.41
CLIP3-206ENST00000593074 SRP9P49458 86 aaKnown RBP17.64■□□□□ 0.41
CLIP3-206ENST00000593074 BTG1P62324 171 aa17.64■□□□□ 0.41
CLIP3-206ENST00000593074 EIF2B1Q14232 305 aaKnown RBP17.64■□□□□ 0.41
CLIP3-206ENST00000593074 ZFP69Q49AA0 526 aa17.64■□□□□ 0.41
CLIP3-206ENST00000593074 NCCRP1Q6ZVX7 275 aaPredicted RBP17.64■□□□□ 0.41
CLIP3-206ENST00000593074 TOMM5Q8N4H5 51 aa17.64■□□□□ 0.41
CLIP3-206ENST00000593074 OR52N5Q8NH56 324 aa17.64■□□□□ 0.41
CLIP3-206ENST00000593074 OR5V1Q9UGF6 321 aa17.64■□□□□ 0.41
CLIP3-206ENST00000593074 MRPS7Q9Y2R9 242 aaKnown RBP17.64■□□□□ 0.41
CLIP3-206ENST00000593074 PCDHGA5Q9Y5G8 931 aa17.64■□□□□ 0.41
CLIP3-206ENST00000593074 ETV7Q9Y603 341 aa17.64■□□□□ 0.41
CLIP3-206ENST00000593074 INMT-MINDY4F8WBC2 141 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 WNT11O96014 354 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 CFPP27918 469 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 FMODQ06828 376 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 EXT1Q16394 746 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 PCK2Q16822 640 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 C3orf33Q6P1S2 294 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 FCRLAQ7L513 359 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 KRT77Q7Z794 578 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 OR2Y1Q8NGV0 311 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 OR2B2Q9GZK3 357 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 TRABD2BA6NFA1 517 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 PNPP00491 289 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 RAB40ALP0C0E4 278 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 ARSBP15848 533 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 RIDAP52758 137 aaKnown RBP17.63■□□□□ 0.41
CLIP3-206ENST00000593074 CLDN12P56749 244 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 SCAND1P57086 179 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 MYBPHQ13203 477 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 DCAF12Q5T6F0 453 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 FADS6Q8N9I5 356 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 ADPRHL1Q8NDY3 354 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 RAB40AQ8WXH6 277 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 IMMP1LQ96LU5 166 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 C5orf34Q96MH7 638 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 RANGRFQ9HD47 186 aaPredicted RBP17.63■□□□□ 0.41
CLIP3-206ENST00000593074 SERINC1Q9NRX5 453 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 DDX28Q9NUL7 540 aaKnown RBP17.63■□□□□ 0.41
CLIP3-206ENST00000593074 MED29Q9NX70 200 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 FBXL2Q9UKC9 423 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 LRP12Q9Y561 859 aa17.63■□□□□ 0.41
CLIP3-206ENST00000593074 CHCHD2Q9Y6H1 151 aaPredicted RBP17.63■□□□□ 0.41
CLIP3-206ENST00000593074 LNP1A1A4G5 178 aa17.62■□□□□ 0.41
CLIP3-206ENST00000593074 MPZL1O95297 269 aa17.62■□□□□ 0.41
CLIP3-206ENST00000593074 AVPR2P30518 371 aa17.62■□□□□ 0.41
CLIP3-206ENST00000593074 ODF4Q2M2E3 257 aa17.62■□□□□ 0.41
CLIP3-206ENST00000593074 STPG1Q5TH74 334 aa17.62■□□□□ 0.41
CLIP3-206ENST00000593074 NHLRC1Q6VVB1 395 aa17.62■□□□□ 0.41
CLIP3-206ENST00000593074 IZUMO1Q8IYV9 350 aa17.62■□□□□ 0.41
CLIP3-206ENST00000593074 DND1Q8IYX4 353 aaKnown RBP17.62■□□□□ 0.41
CLIP3-206ENST00000593074 C7orf50Q9BRJ6 194 aaKnown RBP17.62■□□□□ 0.41
CLIP3-206ENST00000593074 PLEKHA1Q9HB21 404 aa17.62■□□□□ 0.41
CLIP3-206ENST00000593074 KLHL13Q9P2N7 655 aa17.62■□□□□ 0.41
CLIP3-206ENST00000593074 B3GAT1Q9P2W7 334 aa17.62■□□□□ 0.41
CLIP3-206ENST00000593074 HS3ST3B1Q9Y662 390 aa17.62■□□□□ 0.41
CLIP3-206ENST00000593074 ANXA2P2A6NMY6 339 aa17.62■□□□□ 0.41
CLIP3-206ENST00000593074 CENPXA8MT69 81 aa17.62■□□□□ 0.41
CLIP3-206ENST00000593074 ANXA2P07355 339 aaKnown RBP17.62■□□□□ 0.41
CLIP3-206ENST00000593074 COX6A1P12074 109 aa17.62■□□□□ 0.41
CLIP3-206ENST00000593074 MFGE8Q08431 387 aaPredicted RBP17.62■□□□□ 0.41
CLIP3-206ENST00000593074 SNTA1Q13424 505 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms