RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 CIB1Q99828 191 aa13.03□□□□□ -0.32
DDX39A-221ENST00000593026 SH3GL3Q99963 347 aa13.03□□□□□ -0.32
DDX39A-221ENST00000593026 OSBPL10Q9BXB5 764 aa13.03□□□□□ -0.32
DDX39A-221ENST00000593026 SIAEQ9HAT2 523 aa13.03□□□□□ -0.32
DDX39A-221ENST00000593026 RPRD1BQ9NQG5 326 aaKnown RBP13.03□□□□□ -0.32
DDX39A-221ENST00000593026 KLHL21Q9UJP4 597 aa13.03□□□□□ -0.32
DDX39A-221ENST00000593026 CENPEQ02224 2701 aa13.02□□□□□ -0.32
DDX39A-221ENST00000593026 OR6C68A6NDL8 312 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 ZNF503-AS2A6NEH8 195 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 DPRXA6NFQ7 191 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 RIIAD1A6NNX1 92 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 MITFO75030 526 aaPredicted RBP13.02□□□□□ -0.33
DDX39A-221ENST00000593026 UBL3O95164 117 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 BAG2O95816 211 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 IFNGP01579 166 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 CD3EP07766 207 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 CBR1P16152 277 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 LOXP28300 417 aaPredicted RBP13.02□□□□□ -0.33
DDX39A-221ENST00000593026 ARR3P36575 388 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 GIPRP48546 466 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 PIGFQ07326 219 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 GINS1Q14691 196 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 SLC36A2Q495M3 483 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 FOXL2NBQ6ZUU3 175 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 DPPA2Q7Z7J5 298 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 MDP1Q86V88 176 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 CDC20BQ86Y33 519 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 LRRC18Q8N456 261 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 FAM169BQ8N8A8 192 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 SLC37A3Q8NCC5 494 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 NPEPL1Q8NDH3 523 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 NABP1Q96AH0 204 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 TSSK2Q96PF2 358 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 SLC38A2Q96QD8 506 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 RBM4BQ9BQ04 359 aaKnown RBP13.02□□□□□ -0.33
DDX39A-221ENST00000593026 RBM4Q9BWF3 364 aaKnown RBP13.02□□□□□ -0.33
DDX39A-221ENST00000593026 TEX12Q9BXU0 123 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 KCNN2Q9H2S1 579 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 FN3KQ9H479 309 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 CMC2Q9NRP2 79 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 B3GNT2Q9NY97 397 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 ZNF224Q9NZL3 707 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 ENOPH1Q9UHY7 261 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 RNF115Q9Y4L5 304 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 PRR14LQ5THK1 2151 aa13.02□□□□□ -0.33
DDX39A-221ENST00000593026 DCHS2Q6V1P9 2916 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 NBPF19A0A087WUL8 3843 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 IGHV1-18A0A0C4DH31 117 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 DCTN6O00399 190 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 RAB36O95755 333 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 IGKV3-15P01624 115 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 MSR1P21757 451 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 CD40P25942 277 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 LAP3P28838 519 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 PTDSS1P48651 473 aaKnown RBP13.01□□□□□ -0.33
DDX39A-221ENST00000593026 CENPAP49450 140 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 CRISP1P54107 249 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 ESRRGP62508 458 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 RAB1AP62820 205 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 PPP2R2BQ00005 443 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 CDK5Q00535 292 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 NPRL3Q12980 569 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 CRMP1Q14194 572 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 ZNF362Q5T0B9 420 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-221ENST00000593026 FAM27BQ5VT28 67 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 ZNF704Q6ZNC4 412 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-221ENST00000593026 GLB1L2Q8IW92 636 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 OR6V1Q8N148 313 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 CYB561A3Q8NBI2 242 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 FOXN4Q96NZ1 517 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 TMEM204Q9BSN7 226 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 RACGAP1Q9H0H5 632 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 RNF121Q9H920 327 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 NOX3Q9HBY0 568 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 SLC25A19Q9HC21 320 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 SRA1Q9HD15 236 aaKnown RBP13.01□□□□□ -0.33
DDX39A-221ENST00000593026 CCNB1IP1Q9NPC3 277 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 POLE4Q9NR33 117 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 CRNNQ9UBG3 495 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-221ENST00000593026 TMEFF2Q9UIK5 374 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-221ENST00000593026 B9D1Q9UPM9 204 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 COA3Q9Y2R0 106 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-221ENST00000593026 FKBP7Q9Y680 259 aa13.01□□□□□ -0.33
DDX39A-221ENST00000593026 IGLV1-36A0A0B4J1U3 117 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 A0A1W2PPR1 153 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 ABCD4O14678 606 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 EI24O14681 340 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 IGLV1-44P01699 117 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 HMGN1P05114 100 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 PATE4P0C8F1 98 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 ZNF3P17036 446 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 IDH3GP51553 393 aaPredicted RBP13□□□□□ -0.33
DDX39A-221ENST00000593026 KRTAP10-9P60411 292 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 GLO1Q04760 184 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 DAG1Q14118 895 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 RCN1Q15293 331 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 C3orf36Q3SXR2 165 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 TMEM236Q5W0B7 351 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 ACSM5Q6NUN0 579 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 ADAM5Q6NVV9 412 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms