RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 TRIM64BA6NI03 449 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 EFCAB9A8MZ26 197 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 B2RBV5 119 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 MCIDASD6RGH6 385 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 hCG_2039718K7EN88 272 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 GMNNO75496 209 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 DIRAS1O95057 198 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 SAGP10523 405 aaPredicted RBP9.7□□□□□ -0.86
SMAD4-211ENST00000590499 APOBEC3AP31941 199 aaPredicted RBP9.7□□□□□ -0.86
SMAD4-211ENST00000590499 GPR4P46093 362 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 OMPP47874 163 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 CLRN1P58418 232 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 NPRL3Q12980 569 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 SEC23BQ15437 767 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 ETFDHQ16134 617 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 GSG1Q2KHT4 349 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 MST1LQ2TV78 715 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 OAFQ86UD1 273 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 SKA3Q8IX90 412 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 SLC22A24Q8N4F4 322 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 NUP37Q8NFH4 326 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 OR51A7Q8NH64 312 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 FGFBP3Q8TAT2 258 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 ZNF519Q8TB69 540 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 TRMT61AQ96FX7 289 aaKnown RBP9.7□□□□□ -0.86
SMAD4-211ENST00000590499 NSMCE2Q96MF7 247 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 TSPAN32Q96QS1 320 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 TNFRSF13CQ96RJ3 184 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 ALG12Q9BV10 488 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 CACNG6Q9BXT2 260 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 DENND2DQ9H6A0 471 aaPredicted RBP9.7□□□□□ -0.86
SMAD4-211ENST00000590499 SMURF2Q9HAU4 748 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 CA10Q9NS85 328 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 ADAM21Q9UKJ8 722 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 UGT2A1Q9Y4X1 527 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 V9GYQ6 96 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 TMEM238LA0A1B0GVL6 79 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 H7C1Q1 480 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 H7C417 338 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 PDE5AO76074 875 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 UBL3O95164 117 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 INHBBP09529 407 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 OR8G3PP0DMU2 310 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 CD79AP11912 226 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 ZNF35P13682 527 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 ITGA2P17301 1181 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 RAB6AP20340 208 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 ATP6V1B2P21281 511 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 CALB2P22676 271 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 ADMP35318 185 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 CAPZA2P47755 286 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 GIPRP48546 466 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 CTXN1P60606 82 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 RPL27P61353 136 aaKnown RBP9.69□□□□□ -0.86
SMAD4-211ENST00000590499 MXRA7P84157 204 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 MYBPC1Q00872 1141 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 FMODQ06828 376 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 TOP3AQ13472 1001 aaPredicted RBP9.69□□□□□ -0.86
SMAD4-211ENST00000590499 ADIPOQQ15848 244 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 FAM122BQ7Z309 247 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 BIVMQ86UB2 503 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 IGFN1Q86VF2 1251 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 ZNF584Q8IVC4 421 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 ARHGAP24Q8N264 748 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 SYT14Q8NB59 555 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 IL17RDQ8NFM7 739 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 OR4F15Q8NGB8 312 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 HTRA1Q92743 480 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 KCNS3Q9BQ31 491 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 BDH2Q9BUT1 245 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 GSX1Q9H4S2 264 aaPredicted RBP9.69□□□□□ -0.86
SMAD4-211ENST00000590499 ZNF442Q9H7R0 627 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 ACTR3BQ9P1U1 418 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 ZNF346Q9UL40 294 aaKnown RBP9.69□□□□□ -0.86
SMAD4-211ENST00000590499 TMEM5Q9Y2B1 443 aa9.69□□□□□ -0.86
SMAD4-211ENST00000590499 FAM32AQ9Y421 112 aaKnown RBP9.69□□□□□ -0.86
SMAD4-211ENST00000590499 SONP18583 2426 aaKnown RBP9.68□□□□□ -0.86
SMAD4-211ENST00000590499 TCRBV5S2A0A599 114 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 SH3PXD2BA1X283 911 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 ENTPD5O75356 428 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 PTP4A3O75365 173 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 SLC2A10O95528 541 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 CD14P08571 375 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 MMP7P09237 267 aaPredicted RBP9.68□□□□□ -0.86
SMAD4-211ENST00000590499 PATE4P0C8F1 98 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 ACVR1BP36896 505 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 PTDSS1P48651 473 aaKnown RBP9.68□□□□□ -0.86
SMAD4-211ENST00000590499 FXYD6P3P58550 94 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 RAB1AP62820 205 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 MRPS34P82930 218 aaKnown RBP9.68□□□□□ -0.86
SMAD4-211ENST00000590499 PIGFQ07326 219 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 TNK1Q13470 666 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 EFNB3Q15768 340 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 CLEC12BQ2HXU8 276 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 ZBED5Q49AG3 693 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 FGD3Q5JSP0 725 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 FAM205BPQ63HN1 556 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 SLC25A47Q6Q0C1 308 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 RINLQ6ZS11 566 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 FOXL2NBQ6ZUU3 175 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms