RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 ADA2Q9NZK5 511 aa13.83□□□□□ -0.2
CXXC1-209ENST00000587342 SLC7A8Q9UHI5 535 aa13.83□□□□□ -0.2
CXXC1-209ENST00000587342 FBXL3Q9UKT7 428 aa13.83□□□□□ -0.2
CXXC1-209ENST00000587342 V9GYQ6 96 aa13.83□□□□□ -0.2
CXXC1-209ENST00000587342 COL6A5A8TX70 2615 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 LOC390937A0A1W2PQ73 354 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 HTR3EA5X5Y0 456 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 A8MV72 311 aaPredicted RBP13.82□□□□□ -0.2
CXXC1-209ENST00000587342 NDUFS8O00217 210 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 STAMBPO95630 424 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 CLPTM1O96005 669 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 SEMG1P04279 462 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 SCG5P05408 212 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 DAOP14920 347 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 ZNF32P17041 273 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 APEX1P27695 318 aaKnown RBP13.82□□□□□ -0.2
CXXC1-209ENST00000587342 MSX2P35548 267 aaPredicted RBP13.82□□□□□ -0.2
CXXC1-209ENST00000587342 FXYD6P3P58550 94 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 ERVK-25P63136 954 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 GALK2Q01415 458 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 PABPC1L2AQ5JQF8 200 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 TMEM255AQ5JRV8 349 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 GKAP1Q5VSY0 366 aaPredicted RBP13.82□□□□□ -0.2
CXXC1-209ENST00000587342 GLYATQ6IB77 296 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 TMEM53Q6P2H8 277 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 FOXL2NBQ6ZUU3 175 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 TMPRSS11FQ6ZWK6 438 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 PIGWQ7Z7B1 504 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 RNF113BQ8IZP6 322 aaKnown RBP13.82□□□□□ -0.2
CXXC1-209ENST00000587342 FAM46AQ96IP4 442 aaKnown RBP13.82□□□□□ -0.2
CXXC1-209ENST00000587342 MDFIQ99750 246 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 FUZQ9BT04 418 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 RNF121Q9H920 327 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 SIAEQ9HAT2 523 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 MYOZ1Q9NP98 299 aaPredicted RBP13.82□□□□□ -0.2
CXXC1-209ENST00000587342 STX18Q9P2W9 335 aaKnown RBP13.82□□□□□ -0.2
CXXC1-209ENST00000587342 MXRA5Q9NR99 2828 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 MALRD1Q5VYJ5 2156 aa13.82□□□□□ -0.2
CXXC1-209ENST00000587342 A0A1W2PRQ8 180 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 M0R233 179 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 NDUFAB1O14561 156 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 IMPA2O14732 288 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 SYNGR3O43761 229 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 NCR1O76036 304 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 SNAP29O95721 258 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 H1F0P07305 194 aaKnown RBP13.81□□□□□ -0.2
CXXC1-209ENST00000587342 TCN1P20061 433 aaPredicted RBP13.81□□□□□ -0.2
CXXC1-209ENST00000587342 GIFP27352 417 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 IL2RGP31785 369 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 IFNA8P32881 189 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 WNT5AP41221 380 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 SLC9A3P48764 834 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 EVX1P49640 407 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 DGCR6Q14129 220 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 TAF11Q15544 211 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 MESTQ5EB52 335 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 THSD4Q6ZMP0 1018 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 FAM122BQ7Z309 247 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 CPLX4Q7Z7G2 160 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 DPPA2Q7Z7J5 298 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 HIPK1Q86Z02 1210 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 AKR7LQ8NHP1 331 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 GTF3AQ92664 365 aaKnown RBP13.81□□□□□ -0.2
CXXC1-209ENST00000587342 DHRS1Q96LJ7 313 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 Q96M85 177 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 GPA33Q99795 319 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 ANKRD19PQ9H560 264 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 REV1Q9UBZ9 1251 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 CD300AQ9UGN4 299 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 RPS6KA6Q9UK32 745 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 SPEF1Q9Y4P9 236 aa13.81□□□□□ -0.2
CXXC1-209ENST00000587342 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.81□□□□□ -0.28e-7■■■■□ 25.7
CXXC1-209ENST00000587342 SVEP1Q4LDE5 3571 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 LOC100509620A0A075B734 347 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 LRP5LA4QPB2 252 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 ENTPD5O75356 428 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 HPXP02790 462 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 NAT2P11245 290 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 HSD17B1P14061 328 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 LAP3P28838 519 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 OMPP47874 163 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 RPS23P62266 143 aaKnown RBP13.8□□□□□ -0.2
CXXC1-209ENST00000587342 RIN1Q13671 783 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 ENDOGQ14249 297 aaKnown RBP13.8□□□□□ -0.2
CXXC1-209ENST00000587342 TRIP10Q15642 601 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 SGCAQ16586 387 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 ALKBH6Q3KRA9 238 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 FGD3Q5JSP0 725 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 ELFN2Q5R3F8 820 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 FAM27BQ5VT28 67 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 OTPQ5XKR4 325 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 FAM205BPQ63HN1 556 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 ZNF101Q8IZC7 436 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 ZNF786Q8N393 782 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 ARIH2OSQ8N7S6 290 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 NEU4Q8WWR8 484 aaPredicted RBP13.8□□□□□ -0.2
CXXC1-209ENST00000587342 MSI2Q96DH6 328 aaKnown RBP13.8□□□□□ -0.2
CXXC1-209ENST00000587342 WNT5BQ9H1J7 359 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 CDH20Q9HBT6 801 aa13.8□□□□□ -0.2
CXXC1-209ENST00000587342 SIGLEC7Q9Y286 467 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms