RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 IQCF1Q8N6M8 205 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 SDR9C7Q8NEX9 313 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 PROKR2Q8NFJ6 384 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 OR2T4Q8NH00 348 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 MUS81Q96NY9 551 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 RPRD1BQ9NQG5 326 aaKnown RBP12.16□□□□□ -0.46
TRAF4-215ENST00000584944 SLC17A5Q9NRA2 495 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 TMEM38BQ9NVV0 291 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 BHLHE40O14503 412 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 EI24O14681 340 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 MGRN1O60291 552 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 IGFBP1P08833 259 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-215ENST00000584944 IGFBP2P18065 325 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 GRK5P34947 590 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 GIPRP48546 466 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 ZNF83P51522 516 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 ALDH3A2P51648 485 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 NR1H2P55055 460 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 FOXG1P55316 489 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-215ENST00000584944 PCBD1P61457 104 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 TLE4Q04727 773 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 GLO1Q04760 184 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 PLP2Q04941 152 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 DAG1Q14118 895 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 SNAPC1Q16533 368 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 HIST3H3Q16695 136 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 BEX5Q5H9J7 111 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 C10orf128Q5T292 105 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 KDM4DQ6B0I6 523 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 TMEM53Q6P2H8 277 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 TMEM108Q6UXF1 575 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 LINGO2Q7L985 606 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 SLC16A14Q7RTX9 510 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 LRRC18Q8N456 261 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 SLC22A24Q8N4F4 322 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 OR10H5Q8NGA6 315 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 OR8D4Q8NGM9 314 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 BCL2L2Q92843 193 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-215ENST00000584944 C1QTNF6Q9BXI9 259 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 SRA1Q9HD15 236 aaKnown RBP12.15□□□□□ -0.46
TRAF4-215ENST00000584944 VSX1Q9NZR4 365 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-215ENST00000584944 REV1Q9UBZ9 1251 aa12.15□□□□□ -0.46
TRAF4-215ENST00000584944 HCFC1P51610 2035 aa12.15□□□□□ -0.47
TRAF4-215ENST00000584944 MTORP42345 2549 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 C12orf71A8MTZ7 269 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 PRR23D1E9PI22 279 aaPredicted RBP12.14□□□□□ -0.47
TRAF4-215ENST00000584944 M0R1B8 84 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 MITFO75030 526 aaPredicted RBP12.14□□□□□ -0.47
TRAF4-215ENST00000584944 UBL3O95164 117 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 GOSR1O95249 250 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 PRR23D2P0DMB1 279 aaPredicted RBP12.14□□□□□ -0.47
TRAF4-215ENST00000584944 MSR1P21757 451 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 CDKN2AP42771 156 aaKnown RBP12.14□□□□□ -0.47
TRAF4-215ENST00000584944 MRPS34P82930 218 aaKnown RBP12.14□□□□□ -0.47
TRAF4-215ENST00000584944 HSF2Q03933 536 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 PIGFQ07326 219 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 NPRL3Q12980 569 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 LRRC36Q1X8D7 754 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 GSG1Q2KHT4 349 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.14□□□□□ -0.47
TRAF4-215ENST00000584944 CYB561A3Q8NBI2 242 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 ZNF837Q96EG3 531 aaPredicted RBP12.14□□□□□ -0.47
TRAF4-215ENST00000584944 PIK3IP1Q96FE7 263 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 SNX18Q96RF0 628 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 CDADC1Q9BWV3 514 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 NUAK2Q9H093 628 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 NELFAQ9H3P2 528 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 SIAEQ9HAT2 523 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 C8orf4Q9NR00 106 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 IMPAD1Q9NX62 359 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 TVP23BQ9NYZ1 205 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 H2AFY2Q9P0M6 372 aaPredicted RBP12.14□□□□□ -0.47
TRAF4-215ENST00000584944 POU2F3Q9UKI9 436 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 FBXL3Q9UKT7 428 aa12.14□□□□□ -0.47
TRAF4-215ENST00000584944 A6NNC1 897 aa12.13□□□□□ -0.47
TRAF4-215ENST00000584944 CD3EP07766 207 aa12.13□□□□□ -0.47
TRAF4-215ENST00000584944 CRYGSP22914 178 aa12.13□□□□□ -0.47
TRAF4-215ENST00000584944 LAP3P28838 519 aa12.13□□□□□ -0.47
TRAF4-215ENST00000584944 CDAP32320 146 aa12.13□□□□□ -0.47
TRAF4-215ENST00000584944 ARR3P36575 388 aa12.13□□□□□ -0.47
TRAF4-215ENST00000584944 PTDSS1P48651 473 aaKnown RBP12.13□□□□□ -0.47
TRAF4-215ENST00000584944 CDC42P60953 191 aa12.13□□□□□ -0.47
TRAF4-215ENST00000584944 RPS7P62081 194 aaKnown RBP12.13□□□□□ -0.47
TRAF4-215ENST00000584944 TUBA1BP68363 451 aa12.13□□□□□ -0.47
TRAF4-215ENST00000584944 TUBA4AP68366 448 aa12.13□□□□□ -0.47
TRAF4-215ENST00000584944 PPP2R2BQ00005 443 aa12.13□□□□□ -0.47
TRAF4-215ENST00000584944 PTGES3Q15185 160 aaKnown RBP12.13□□□□□ -0.47
TRAF4-215ENST00000584944 NRN1LQ496H8 165 aa12.13□□□□□ -0.47
TRAF4-215ENST00000584944 SLC25A47Q6Q0C1 308 aa12.13□□□□□ -0.47
TRAF4-215ENST00000584944 SPNS3Q6ZMD2 512 aa12.13□□□□□ -0.47
TRAF4-215ENST00000584944 PTCHD4Q6ZW05 846 aa12.13□□□□□ -0.47
TRAF4-215ENST00000584944 TUBA1AQ71U36 451 aa12.13□□□□□ -0.47
TRAF4-215ENST00000584944 CDH24Q86UP0 819 aa12.13□□□□□ -0.47
TRAF4-215ENST00000584944 WDFY1Q8IWB7 410 aa12.13□□□□□ -0.47
TRAF4-215ENST00000584944 OR6K6Q8NGW6 343 aa12.13□□□□□ -0.47
TRAF4-215ENST00000584944 OR4Q3Q8NH05 313 aa12.13□□□□□ -0.47
TRAF4-215ENST00000584944 SH3GL3Q99963 347 aa12.13□□□□□ -0.47
TRAF4-215ENST00000584944 CMC2Q9NRP2 79 aa12.13□□□□□ -0.47
TRAF4-215ENST00000584944 EDARQ9UNE0 448 aa12.13□□□□□ -0.47
TRAF4-215ENST00000584944 ARPC4-TTLL3A0A0A6YYG9 625 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms