RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ST3GAL3Q11203 375 aa9.55□□□□□ -0.88
CCDC47-206ENST00000584112 FXNQ16595 210 aa9.55□□□□□ -0.88
CCDC47-206ENST00000584112 OCLNQ16625 522 aa9.55□□□□□ -0.88
CCDC47-206ENST00000584112 HIST3H3Q16695 136 aa9.55□□□□□ -0.88
CCDC47-206ENST00000584112 UGT2A3Q6UWM9 527 aa9.55□□□□□ -0.88
CCDC47-206ENST00000584112 SLC16A14Q7RTX9 510 aa9.55□□□□□ -0.88
CCDC47-206ENST00000584112 MICU2Q8IYU8 434 aa9.55□□□□□ -0.88
CCDC47-206ENST00000584112 SLC30A7Q8NEW0 376 aa9.55□□□□□ -0.88
CCDC47-206ENST00000584112 OR4K5Q8NGD3 323 aa9.55□□□□□ -0.88
CCDC47-206ENST00000584112 OR1J2Q8NGS2 313 aa9.55□□□□□ -0.88
CCDC47-206ENST00000584112 RP9Q8TA86 221 aaKnown RBP9.55□□□□□ -0.88
CCDC47-206ENST00000584112 MCHR2Q969V1 340 aa9.55□□□□□ -0.88
CCDC47-206ENST00000584112 TPD52L3Q96J77 140 aa9.55□□□□□ -0.88
CCDC47-206ENST00000584112 PRRC1Q96M27 445 aa9.55□□□□□ -0.88
CCDC47-206ENST00000584112 ZNF347Q96SE7 839 aa9.55□□□□□ -0.88
CCDC47-206ENST00000584112 SH3GL3Q99963 347 aa9.55□□□□□ -0.88
CCDC47-206ENST00000584112 MRPL13Q9BYD1 178 aaKnown RBP9.55□□□□□ -0.88
CCDC47-206ENST00000584112 LRMDAQ9H2I8 198 aa9.55□□□□□ -0.88
CCDC47-206ENST00000584112 KCNN2Q9H2S1 579 aa9.55□□□□□ -0.88
CCDC47-206ENST00000584112 CDH20Q9HBT6 801 aa9.55□□□□□ -0.88
CCDC47-206ENST00000584112 REV1Q9UBZ9 1251 aa9.55□□□□□ -0.88
CCDC47-206ENST00000584112 ZNF346Q9UL40 294 aaKnown RBP9.55□□□□□ -0.88
CCDC47-206ENST00000584112 DOCK11Q5JSL3 2073 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 IQCMA0A1B0GVH7 501 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 TRIM77I1YAP6 450 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 TRMUO75648 421 aaKnown RBP9.54□□□□□ -0.88
CCDC47-206ENST00000584112 SNAP29O95721 258 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 TACSTD2P09758 323 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 TSPAN19P0C672 248 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 PATE4P0C8F1 98 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 AQP2P41181 271 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 MYBPC1Q00872 1141 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 GUCY1A3Q02108 690 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 SF3A3Q12874 501 aaKnown RBP eCLIP9.54□□□□□ -0.88
CCDC47-206ENST00000584112 TAF11Q15544 211 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 TBC1D28Q2M2D7 210 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 C10orf128Q5T292 105 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 ZNF584Q8IVC4 421 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 ZCCHC24Q8N2G6 241 aaKnown RBP9.54□□□□□ -0.88
CCDC47-206ENST00000584112 SYT14Q8NB59 555 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 RBM15BQ8NDT2 890 aaKnown RBP9.54□□□□□ -0.88
CCDC47-206ENST00000584112 FGFBP3Q8TAT2 258 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 FNDC8Q8TC99 324 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 HPS1Q92902 700 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 RCN3Q96D15 328 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 RBMXL1Q96E39 390 aaKnown RBP9.54□□□□□ -0.88
CCDC47-206ENST00000584112 SEPHS2Q99611 448 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 SYT3Q9BQG1 590 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 RBM4Q9BWF3 364 aaKnown RBP9.54□□□□□ -0.88
CCDC47-206ENST00000584112 TPK1Q9H3S4 243 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 SMURF2Q9HAU4 748 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 C20orf141Q9NUB4 165 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 GPR160Q9UJ42 338 aa9.54□□□□□ -0.88
CCDC47-206ENST00000584112 A0A1W2PPW3 197 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 NDUFAB1O14561 156 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 CCDC22O60826 627 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 IFNW1P05000 195 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 IGFBP1P08833 259 aaPredicted RBP9.53□□□□□ -0.88
CCDC47-206ENST00000584112 IFI30P13284 250 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 APLNRP35414 380 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 RAD52P43351 418 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 ALDH3B1P43353 468 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 ZNF133P52736 654 aaPredicted RBP9.53□□□□□ -0.88
CCDC47-206ENST00000584112 PRSS12P56730 875 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 HSF2Q03933 536 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 CD47Q08722 323 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 RIN1Q13671 783 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 MSMPQ1L6U9 139 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 ANKDD1AQ495B1 522 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 ALG10Q5BKT4 473 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 ARMC4Q5T2S8 1044 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 RGS7BPQ6MZT1 257 aaPredicted RBP9.53□□□□□ -0.88
CCDC47-206ENST00000584112 C11orf87Q6NUJ2 197 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 POU5F2Q8N7G0 328 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 SNX33Q8WV41 574 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 BPIFA2Q96DR5 249 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 HOPXQ9BPY8 73 aaPredicted RBP9.53□□□□□ -0.88
CCDC47-206ENST00000584112 SOX7Q9BT81 388 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 FNDC11Q9BVV2 318 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 BCL2L14Q9BZR8 327 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 TXNIPQ9H3M7 391 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 METTL17Q9H7H0 456 aaPredicted RBP9.53□□□□□ -0.88
CCDC47-206ENST00000584112 SIAEQ9HAT2 523 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 CCNB1IP1Q9NPC3 277 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 MED4Q9NPJ6 270 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 ZNF446Q9NWS9 450 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 DUSP13Q9UII6 198 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 A4GNTQ9UNA3 340 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 HIF3AQ9Y2N7 669 aa9.53□□□□□ -0.88
CCDC47-206ENST00000584112 LRP5LA4QPB2 252 aa9.52□□□□□ -0.89
CCDC47-206ENST00000584112 GSTA4O15217 222 aa9.52□□□□□ -0.89
CCDC47-206ENST00000584112 PIP5K1CO60331 668 aa9.52□□□□□ -0.89
CCDC47-206ENST00000584112 LILRA1O75019 489 aa9.52□□□□□ -0.89
CCDC47-206ENST00000584112 LCKP06239 509 aa9.52□□□□□ -0.89
CCDC47-206ENST00000584112 SAGP10523 405 aaPredicted RBP9.52□□□□□ -0.89
CCDC47-206ENST00000584112 COX4I1P13073 169 aa9.52□□□□□ -0.89
CCDC47-206ENST00000584112 ACHEP22303 614 aa9.52□□□□□ -0.89
CCDC47-206ENST00000584112 APEX1P27695 318 aaKnown RBP9.52□□□□□ -0.89
CCDC47-206ENST00000584112 GUCA1AP43080 201 aaPredicted RBP9.52□□□□□ -0.89
CCDC47-206ENST00000584112 SLC9A3P48764 834 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms