RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 UGT2A1Q9Y4X1 527 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 ABCA1O95477 2261 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 HIVEP2P31629 2446 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 CHD3Q12873 2000 aaKnown RBP17.62■□□□□ 0.41
SS18-224ENST00000584083 RTTNQ86VV8 2226 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 IGKV1D-43A0A0B4J1Z2 117 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 TRBV4-1A0A0J9YWV2 114 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 IQCMA0A1B0GVH7 501 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 TMEM129A0AVI4 362 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 B2RBV5 119 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 GPRIN2O60269 458 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 FAM107AO95990 144 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 PTHP01270 115 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 TP53P04637 393 aaPredicted RBP17.62■□□□□ 0.41
SS18-224ENST00000584083 ERCC1P07992 297 aaPredicted RBP17.62■□□□□ 0.41
SS18-224ENST00000584083 PCSK6P29122 969 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 GLRXP35754 106 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 GUCA1AP43080 201 aaPredicted RBP17.62■□□□□ 0.41
SS18-224ENST00000584083 PPOXP50336 477 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 CARTPTQ16568 116 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 SPATS1Q496A3 300 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 ARIH2OSQ8N7S6 290 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 CCDC197Q8NCU1 140 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 ZNF519Q8TB69 540 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 C10orf105Q8TEF2 133 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 NSL1Q96IY1 281 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 C1orf198Q9H425 327 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 KRCC1Q9NPI7 259 aaPredicted RBP17.62■□□□□ 0.41
SS18-224ENST00000584083 SLC7A8Q9UHI5 535 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 AURKCQ9UQB9 309 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 NAV3Q8IVL0 2385 aa17.62■□□□□ 0.41
SS18-224ENST00000584083 CD14P08571 375 aa17.61■□□□□ 0.41
SS18-224ENST00000584083 CCL2P13500 99 aa17.61■□□□□ 0.41
SS18-224ENST00000584083 SLC25A16P16260 332 aa17.61■□□□□ 0.41
SS18-224ENST00000584083 PDLIM4P50479 330 aa17.61■□□□□ 0.41
SS18-224ENST00000584083 SMIM11AP58511 58 aa17.61■□□□□ 0.41
SS18-224ENST00000584083 RPS23P62266 143 aaKnown RBP17.61■□□□□ 0.41
SS18-224ENST00000584083 PPP2R2BQ00005 443 aa17.61■□□□□ 0.41
SS18-224ENST00000584083 SPIBQ01892 262 aa17.61■□□□□ 0.41
SS18-224ENST00000584083 HSF2Q03933 536 aa17.61■□□□□ 0.41
SS18-224ENST00000584083 SEC23BQ15437 767 aa17.61■□□□□ 0.41
SS18-224ENST00000584083 OR1J2Q8NGS2 313 aa17.61■□□□□ 0.41
SS18-224ENST00000584083 MRPL24Q96A35 216 aaKnown RBP17.61■□□□□ 0.41
SS18-224ENST00000584083 Q96M85 177 aa17.61■□□□□ 0.41
SS18-224ENST00000584083 LRMDAQ9H2I8 198 aa17.61■□□□□ 0.41
SS18-224ENST00000584083 ADAM18Q9Y3Q7 739 aa17.61■□□□□ 0.41
SS18-224ENST00000584083 A0A1W2PPL8 197 aa17.6■□□□□ 0.41
SS18-224ENST00000584083 H7C1C5 153 aa17.6■□□□□ 0.41
SS18-224ENST00000584083 XKRYO14609 159 aa17.6■□□□□ 0.41
SS18-224ENST00000584083 NDUFB2O95178 105 aa17.6■□□□□ 0.41
SS18-224ENST00000584083 GADD45GO95257 159 aa17.6■□□□□ 0.41
SS18-224ENST00000584083 ZNF26P17031 533 aaPredicted RBP17.6■□□□□ 0.41
SS18-224ENST00000584083 OMPP47874 163 aa17.6■□□□□ 0.41
SS18-224ENST00000584083 LCN6P62502 163 aa17.6■□□□□ 0.41
SS18-224ENST00000584083 TBC1D28Q2M2D7 210 aa17.6■□□□□ 0.41
SS18-224ENST00000584083 PABPC1L2AQ5JQF8 200 aa17.6■□□□□ 0.41
SS18-224ENST00000584083 ZCCHC24Q8N2G6 241 aaKnown RBP17.6■□□□□ 0.41
SS18-224ENST00000584083 NABP1Q96AH0 204 aa17.6■□□□□ 0.41
SS18-224ENST00000584083 RSRC1Q96IZ7 334 aaKnown RBP17.6■□□□□ 0.41
SS18-224ENST00000584083 DHRS1Q96LJ7 313 aa17.6■□□□□ 0.41
SS18-224ENST00000584083 ZNF570Q96NI8 536 aa17.6■□□□□ 0.41
SS18-224ENST00000584083 SYT3Q9BQG1 590 aa17.6■□□□□ 0.41
SS18-224ENST00000584083 MRPL37Q9BZE1 423 aaKnown RBP17.6■□□□□ 0.41
SS18-224ENST00000584083 FZR1Q9UM11 496 aa17.6■□□□□ 0.41
SS18-224ENST00000584083 YLPM1P49750 1951 aaKnown RBP17.6■□□□□ 0.41
SS18-224ENST00000584083 FN1P02751 2386 aaKnown RBP17.6■□□□□ 0.41
SS18-224ENST00000584083 SLC22A23A1A5C7 686 aa17.59■□□□□ 0.41
SS18-224ENST00000584083 INAFM1C9JVW0 142 aa17.59■□□□□ 0.41
SS18-224ENST00000584083 SEMG1P04279 462 aa17.59■□□□□ 0.41
SS18-224ENST00000584083 FABP3P05413 133 aa17.59■□□□□ 0.41
SS18-224ENST00000584083 ADRA2AP08913 450 aa17.59■□□□□ 0.41
SS18-224ENST00000584083 MMP7P09237 267 aaPredicted RBP17.59■□□□□ 0.41
SS18-224ENST00000584083 FAM157BP0CG42 384 aa17.59■□□□□ 0.41
SS18-224ENST00000584083 ZNF32P17041 273 aa17.59■□□□□ 0.41
SS18-224ENST00000584083 APEX1P27695 318 aaKnown RBP17.59■□□□□ 0.41
SS18-224ENST00000584083 APLNRP35414 380 aa17.59■□□□□ 0.41
SS18-224ENST00000584083 LIMS1P48059 325 aa17.59■□□□□ 0.41
SS18-224ENST00000584083 KRTAP1-1Q07627 177 aa17.59■□□□□ 0.41
SS18-224ENST00000584083 MSMPQ1L6U9 139 aa17.59■□□□□ 0.41
SS18-224ENST00000584083 IQCCQ4KMZ1 466 aa17.59■□□□□ 0.41
SS18-224ENST00000584083 FAM27BQ5VT28 67 aa17.59■□□□□ 0.41
SS18-224ENST00000584083 PAQR4Q8N4S7 273 aaPredicted RBP17.59■□□□□ 0.41
SS18-224ENST00000584083 OR51B6Q9H340 312 aa17.59■□□□□ 0.41
SS18-224ENST00000584083 DUSP13Q9UII6 198 aa17.59■□□□□ 0.41
SS18-224ENST00000584083 SIGLEC7Q9Y286 467 aa17.59■□□□□ 0.41
SS18-224ENST00000584083 UNC119BA6NIH7 251 aa17.58■□□□□ 0.4
SS18-224ENST00000584083 SYNGR3O43761 229 aa17.58■□□□□ 0.4
SS18-224ENST00000584083 PTP4A3O75365 173 aa17.58■□□□□ 0.4
SS18-224ENST00000584083 LAP3P28838 519 aa17.58■□□□□ 0.4
SS18-224ENST00000584083 EVX1P49640 407 aa17.58■□□□□ 0.4
SS18-224ENST00000584083 CYP2R1Q6VVX0 501 aa17.58■□□□□ 0.4
SS18-224ENST00000584083 NEU4Q8WWR8 484 aaPredicted RBP17.58■□□□□ 0.4
SS18-224ENST00000584083 PIMREGQ9BSJ6 248 aa17.58■□□□□ 0.4
SS18-224ENST00000584083 FUZQ9BT04 418 aa17.58■□□□□ 0.4
SS18-224ENST00000584083 MYOZ1Q9NP98 299 aaPredicted RBP17.58■□□□□ 0.4
SS18-224ENST00000584083 IL1RAPQ9NPH3 570 aa17.58■□□□□ 0.4
SS18-224ENST00000584083 IL20RAQ9UHF4 553 aa17.58■□□□□ 0.4
SS18-224ENST00000584083 ADAM21Q9UKJ8 722 aa17.58■□□□□ 0.4
SS18-224ENST00000584083 TEX13CA0A0J9YWL9 993 aa17.57■□□□□ 0.4
SS18-224ENST00000584083 LOC390937A0A1W2PQ73 354 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms